RNA–Protein interactions for RNA: ENST00000497305.1

SHOC2-207, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

TSL 1 (best)

Gene SHOC2, Length 325 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-207ENST00000497305 AEBP2Q6ZN18 517 aaPredicted RBP28.96■■■□□ 2.23
SHOC2-207ENST00000497305 CHIC1Q5VXU3 224 aa26.88■■□□□ 1.89
SHOC2-207ENST00000497305 SENP3Q9H4L4 574 aaPredicted RBP24.77■■□□□ 1.56
SHOC2-207ENST00000497305 PHF23Q9BUL5 403 aaPredicted RBP24.31■■□□□ 1.48
SHOC2-207ENST00000497305 POTEDQ86YR6 584 aa23.98■■□□□ 1.43
SHOC2-207ENST00000497305 FOXD1Q16676 465 aa23.33■■□□□ 1.33
SHOC2-207ENST00000497305 MSH5O43196 834 aa22.22■■□□□ 1.15
SHOC2-207ENST00000497305 PIAS4Q8N2W9 510 aaPredicted RBP21.43■■□□□ 1.02
SHOC2-207ENST00000497305 PPP6R1Q9UPN7 881 aa20.86■□□□□ 0.93
SHOC2-207ENST00000497305 ADRA2BP18089 450 aa20.68■□□□□ 0.9
SHOC2-207ENST00000497305 PLPPR3Q6T4P5 718 aa20.26■□□□□ 0.83
SHOC2-207ENST00000497305 CACNB1Q02641 598 aaPredicted RBP19.87■□□□□ 0.77
SHOC2-207ENST00000497305 DMRT2Q9Y5R5 561 aa19.48■□□□□ 0.71
SHOC2-207ENST00000497305 MAPK8IP2Q13387 824 aaPredicted RBP19.41■□□□□ 0.7
SHOC2-207ENST00000497305 RNF39Q9H2S5 420 aa18.91■□□□□ 0.62
SHOC2-207ENST00000497305 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
SHOC2-207ENST00000497305 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
SHOC2-207ENST00000497305 POTEHQ6S545 545 aa18.51■□□□□ 0.55
SHOC2-207ENST00000497305 C1QBPQ07021 282 aaKnown RBP18.5■□□□□ 0.55
SHOC2-207ENST00000497305 HOXD11P31277 338 aaPredicted RBP18.26■□□□□ 0.51
SHOC2-207ENST00000497305 DNAJC5BQ9UF47 199 aa17.82■□□□□ 0.44
SHOC2-207ENST00000497305 RNF216Q9NWF9 866 aaPredicted RBP17.74■□□□□ 0.43
SHOC2-207ENST00000497305 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
SHOC2-207ENST00000497305 CNKSR2Q8WXI2 1034 aa17.56■□□□□ 0.4
SHOC2-207ENST00000497305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.33■□□□□ 0.36
SHOC2-207ENST00000497305 DSG3P32926 999 aa17.28■□□□□ 0.36
SHOC2-207ENST00000497305 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
SHOC2-207ENST00000497305 CAPN15O75808 1086 aa17.02■□□□□ 0.32
SHOC2-207ENST00000497305 U3KPZ7 1027 aaPredicted RBP16.92■□□□□ 0.3
SHOC2-207ENST00000497305 SP7Q8TDD2 431 aaPredicted RBP16.73■□□□□ 0.27
SHOC2-207ENST00000497305 CHRDL2Q6WN34 429 aa16.64■□□□□ 0.25
SHOC2-207ENST00000497305 ABCB7O75027 752 aa16.57■□□□□ 0.24
SHOC2-207ENST00000497305 NCBP3Q53F19 620 aaKnown RBP16.46■□□□□ 0.23
SHOC2-207ENST00000497305 TRHP20396 242 aaPredicted RBP16.45■□□□□ 0.22
SHOC2-207ENST00000497305 RBM42Q9BTD8 480 aaKnown RBP16.42■□□□□ 0.22
SHOC2-207ENST00000497305 NPM3O75607 178 aaKnown RBP16.35■□□□□ 0.21
SHOC2-207ENST00000497305 ZNF219Q9P2Y4 722 aaPredicted RBP16.33■□□□□ 0.2
SHOC2-207ENST00000497305 APLP2Q06481 763 aa16.12■□□□□ 0.17
SHOC2-207ENST00000497305 PIP4P2Q8N4L2 257 aa16■□□□□ 0.15
SHOC2-207ENST00000497305 HAX1O00165 279 aa15.99■□□□□ 0.15
SHOC2-207ENST00000497305 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
SHOC2-207ENST00000497305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.83■□□□□ 0.12
SHOC2-207ENST00000497305 EVX2Q03828 476 aa15.83■□□□□ 0.12
SHOC2-207ENST00000497305 HNRNPUL2Q1KMD3 747 aaKnown RBP15.83■□□□□ 0.12
SHOC2-207ENST00000497305 AKT1S1Q96B36 256 aa15.81■□□□□ 0.12
SHOC2-207ENST00000497305 PLSCR2Q9NRY7 297 aa15.75■□□□□ 0.11
SHOC2-207ENST00000497305 SAMD1Q6SPF0 538 aaPredicted RBP15.72■□□□□ 0.11
SHOC2-207ENST00000497305 POLA2Q14181 598 aa15.71■□□□□ 0.11
SHOC2-207ENST00000497305 REM2Q8IYK8 340 aaPredicted RBP15.7■□□□□ 0.1
SHOC2-207ENST00000497305 FXR2P51116 673 aaKnown RBP eCLIP15.68■□□□□ 0.1
SHOC2-207ENST00000497305 LHX8Q68G74 356 aa15.67■□□□□ 0.1
SHOC2-207ENST00000497305 PITPNM1O00562 1244 aa15.58■□□□□ 0.08
SHOC2-207ENST00000497305 GABBR2O75899 941 aa15.32■□□□□ 0.04
SHOC2-207ENST00000497305 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
SHOC2-207ENST00000497305 C19orf67A6NJJ6 358 aa15.23■□□□□ 0.03
SHOC2-207ENST00000497305 ZBTB12Q9Y330 459 aaPredicted RBP15.21■□□□□ 0.03
SHOC2-207ENST00000497305 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
SHOC2-207ENST00000497305 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
SHOC2-207ENST00000497305 POTEIP0CG38 1075 aa15.06■□□□□ 0
SHOC2-207ENST00000497305 ATF5Q9Y2D1 282 aaPredicted RBP14.96□□□□□ -0.01
SHOC2-207ENST00000497305 KCNA4P22459 653 aa14.91□□□□□ -0.02
SHOC2-207ENST00000497305 POTEMA6NI47 508 aa14.84□□□□□ -0.03
SHOC2-207ENST00000497305 CLEC11AQ9Y240 323 aa14.8□□□□□ -0.04
SHOC2-207ENST00000497305 POTEGQ6S5H5 508 aa14.75□□□□□ -0.05
SHOC2-207ENST00000497305 SPDYE1Q8NFV5 336 aaPredicted RBP14.74□□□□□ -0.05
SHOC2-207ENST00000497305 CHADLQ6NUI6 762 aa14.72□□□□□ -0.05
SHOC2-207ENST00000497305 OTUD5Q96G74 571 aa14.71□□□□□ -0.05
SHOC2-207ENST00000497305 SPDYE2BA6NHP3 402 aa14.7□□□□□ -0.06
SHOC2-207ENST00000497305 SPDYE6P0CI01 402 aa14.7□□□□□ -0.06
SHOC2-207ENST00000497305 SPDYE2Q495Y8 402 aa14.7□□□□□ -0.06
SHOC2-207ENST00000497305 CD44P16070 742 aaKnown RBP14.56□□□□□ -0.08
SHOC2-207ENST00000497305 DCBLD2Q96PD2 775 aa14.56□□□□□ -0.08
SHOC2-207ENST00000497305 PCDH10Q9P2E7 1040 aa14.56□□□□□ -0.08
SHOC2-207ENST00000497305 POTEB2H3BUK9 544 aa14.54□□□□□ -0.08
SHOC2-207ENST00000497305 CLCN6P51797 869 aa14.5□□□□□ -0.09
SHOC2-207ENST00000497305 SSUH2Q9Y2M2 353 aa14.41□□□□□ -0.1
SHOC2-207ENST00000497305 PRR29P0C7W0 189 aa14.34□□□□□ -0.11
SHOC2-207ENST00000497305 FARP1Q9Y4F1 1045 aaPredicted RBP14.33□□□□□ -0.12
SHOC2-207ENST00000497305 LCE2DQ5TA82 110 aaPredicted RBP14.32□□□□□ -0.12
SHOC2-207ENST00000497305 FBLN2P98095 1184 aa14.3□□□□□ -0.12
SHOC2-207ENST00000497305 ZNF692Q9BU19 519 aaPredicted RBP14.3□□□□□ -0.12
SHOC2-207ENST00000497305 ZNF579Q8NAF0 562 aaKnown RBP14.29□□□□□ -0.12
SHOC2-207ENST00000497305 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
SHOC2-207ENST00000497305 GALR2O43603 387 aaPredicted RBP14.25□□□□□ -0.13
SHOC2-207ENST00000497305 MKRN4PQ13434 485 aaPredicted RBP14.2□□□□□ -0.14
SHOC2-207ENST00000497305 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.14
SHOC2-207ENST00000497305 POTEJP0CG39 1038 aa14.13□□□□□ -0.15
SHOC2-207ENST00000497305 PELP1Q8IZL8 1130 aaKnown RBP14.12□□□□□ -0.15
SHOC2-207ENST00000497305 PABPN1Q86U42 306 aaKnown RBP eCLIP14.08□□□□□ -0.16
SHOC2-207ENST00000497305 FAM163AQ96GL9 167 aaPredicted RBP14.07□□□□□ -0.16
SHOC2-207ENST00000497305 METRNQ9UJH8 293 aa13.96□□□□□ -0.17
SHOC2-207ENST00000497305 CDAN1Q8IWY9 1227 aa13.93□□□□□ -0.18
SHOC2-207ENST00000497305 MAMSTRQ6ZN01 415 aa13.92□□□□□ -0.18
SHOC2-207ENST00000497305 ATXN8OSP0DMR3 200 aa13.9□□□□□ -0.18
SHOC2-207ENST00000497305 PHF12Q96QT6 1004 aa13.9□□□□□ -0.18
SHOC2-207ENST00000497305 ASTLQ6HA08 431 aaPredicted RBP13.83□□□□□ -0.2
SHOC2-207ENST00000497305 SLC39A7Q92504 469 aa13.83□□□□□ -0.2
SHOC2-207ENST00000497305 C7P10643 843 aa13.82□□□□□ -0.2
SHOC2-207ENST00000497305 SCUBE2Q9NQ36 999 aa13.79□□□□□ -0.2
SHOC2-207ENST00000497305 ATMINO43313 823 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms