RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 FAM167A-AS1Q96KT0 104 aa-0.08□□□□□ -2.42
SMC4-225ENST00000497203 C2orf88Q9BSF0 95 aa-0.08□□□□□ -2.42
SMC4-225ENST00000497203 TENM4Q6N022 2769 aa-0.09□□□□□ -2.42
SMC4-225ENST00000497203 MRPS10P82664 201 aaKnown RBP-0.09□□□□□ -2.42
SMC4-225ENST00000497203 TMEM263Q8WUH6 116 aaKnown RBP-0.09□□□□□ -2.42
SMC4-225ENST00000497203 FXYD6Q9H0Q3 95 aa-0.09□□□□□ -2.42
SMC4-225ENST00000497203 GNG8Q9UK08 70 aa-0.09□□□□□ -2.42
SMC4-225ENST00000497203 BTAF1O14981 1849 aa-0.09□□□□□ -2.42
SMC4-225ENST00000497203 MAPKBP1O60336 1514 aa-0.09□□□□□ -2.42
SMC4-225ENST00000497203 WDR7Q9Y4E6 1490 aa-0.1□□□□□ -2.42
SMC4-225ENST00000497203 KIAA1109Q2LD37 5005 aa-0.1□□□□□ -2.43
SMC4-225ENST00000497203 CSMD3Q7Z407 3707 aa-0.1□□□□□ -2.43
SMC4-225ENST00000497203 VWFP04275 2813 aa-0.1□□□□□ -2.43
SMC4-225ENST00000497203 IGLC1P0CG04 106 aa-0.1□□□□□ -2.43
SMC4-225ENST00000497203 KRTAP6-1Q3LI64 71 aa-0.1□□□□□ -2.43
SMC4-225ENST00000497203 NRKQ7Z2Y5 1582 aa-0.11□□□□□ -2.43
SMC4-225ENST00000497203 KDM5AP29375 1690 aaKnown RBP-0.11□□□□□ -2.43
SMC4-225ENST00000497203 FLNAP21333 2647 aaKnown RBP-0.11□□□□□ -2.43
SMC4-225ENST00000497203 SCAPERQ9BY12 1400 aa-0.11□□□□□ -2.43
SMC4-225ENST00000497203 K7EQZ3 153 aa-0.11□□□□□ -2.43
SMC4-225ENST00000497203 SPRR2DP22532 72 aa-0.11□□□□□ -2.43
SMC4-225ENST00000497203 SPRR4Q96PI1 79 aa-0.11□□□□□ -2.43
SMC4-225ENST00000497203 ARL2-SNX15V9GYD0 113 aa-0.11□□□□□ -2.43
SMC4-225ENST00000497203 EPPK1P58107 5090 aaKnown RBP-0.11□□□□□ -2.43
SMC4-225ENST00000497203 RYR1P21817 5038 aa-0.11□□□□□ -2.43
SMC4-225ENST00000497203 ARHGEF5Q12774 1597 aa-0.11□□□□□ -2.43
SMC4-225ENST00000497203 USH2AO75445 5202 aa-0.11□□□□□ -2.43
SMC4-225ENST00000497203 RNF213Q63HN8 5207 aa-0.11□□□□□ -2.43
SMC4-225ENST00000497203 FAT1Q14517 4588 aa-0.12□□□□□ -2.43
SMC4-225ENST00000497203 NAP1L6A6NFF2 107 aa-0.12□□□□□ -2.43
SMC4-225ENST00000497203 COX6CP09669 75 aa-0.12□□□□□ -2.43
SMC4-225ENST00000497203 COX6B1P14854 86 aa-0.12□□□□□ -2.43
SMC4-225ENST00000497203 S100A1P23297 94 aa-0.12□□□□□ -2.43
SMC4-225ENST00000497203 POLA1P09884 1462 aaPredicted RBP-0.12□□□□□ -2.43
SMC4-225ENST00000497203 HERC2O95714 4834 aa-0.12□□□□□ -2.43
SMC4-225ENST00000497203 CHD6Q8TD26 2715 aa-0.12□□□□□ -2.43
SMC4-225ENST00000497203 TET3O43151 1660 aa-0.12□□□□□ -2.43
SMC4-225ENST00000497203 PKD1L1Q8TDX9 2849 aa-0.12□□□□□ -2.43
SMC4-225ENST00000497203 HERC1Q15751 4861 aa-0.12□□□□□ -2.43
SMC4-225ENST00000497203 UBR4Q5T4S7 5183 aa-0.12□□□□□ -2.43
SMC4-225ENST00000497203 ARHGEF12Q9NZN5 1544 aa-0.13□□□□□ -2.43
SMC4-225ENST00000497203 H3BQ15 152 aa-0.13□□□□□ -2.43
SMC4-225ENST00000497203 SYS1-DBNDD2H3BUS1 97 aa-0.13□□□□□ -2.43
SMC4-225ENST00000497203 SPINK4O60575 86 aa-0.13□□□□□ -2.43
SMC4-225ENST00000497203 UBA52P62987 128 aaKnown RBP-0.13□□□□□ -2.43
SMC4-225ENST00000497203 Q0VG73 95 aa-0.13□□□□□ -2.43
SMC4-225ENST00000497203 FAM223AQ8IWN6 122 aa-0.13□□□□□ -2.43
SMC4-225ENST00000497203 FDCSPQ8NFU4 85 aa-0.13□□□□□ -2.43
SMC4-225ENST00000497203 MANBALQ9NQG1 85 aa-0.13□□□□□ -2.43
SMC4-225ENST00000497203 HMGXB3Q12766 1538 aa-0.13□□□□□ -2.43
SMC4-225ENST00000497203 EHBP1L1Q8N3D4 1523 aa-0.13□□□□□ -2.43
SMC4-225ENST00000497203 NSD3Q9BZ95 1437 aa-0.13□□□□□ -2.43
SMC4-225ENST00000497203 HYDINQ4G0P3 5121 aa-0.14□□□□□ -2.43
SMC4-225ENST00000497203 UBE2D3P61077 147 aa-0.14□□□□□ -2.43
SMC4-225ENST00000497203 UBE2D2P62837 147 aa-0.14□□□□□ -2.43
SMC4-225ENST00000497203 PRO1854Q9UHT4 67 aa-0.14□□□□□ -2.43
SMC4-225ENST00000497203 STARD9Q9P2P6 4700 aa-0.14□□□□□ -2.43
SMC4-225ENST00000497203 FAM135AQ9P2D6 1515 aa-0.14□□□□□ -2.43
SMC4-225ENST00000497203 HSPG2P98160 4391 aa-0.15□□□□□ -2.43
SMC4-225ENST00000497203 RYR2Q92736 4967 aa-0.15□□□□□ -2.43
SMC4-225ENST00000497203 TRBV7-4A0A0J9YYF1 115 aa-0.15□□□□□ -2.43
SMC4-225ENST00000497203 TRAPPC2P0DI81 140 aa-0.15□□□□□ -2.43
SMC4-225ENST00000497203 TRAPPC2BP0DI82 140 aa-0.15□□□□□ -2.43
SMC4-225ENST00000497203 COX8AP10176 69 aa-0.15□□□□□ -2.43
SMC4-225ENST00000497203 C10orf113Q5VZT2 155 aa-0.15□□□□□ -2.43
SMC4-225ENST00000497203 DEFB123Q8N688 67 aa-0.15□□□□□ -2.43
SMC4-225ENST00000497203 PRO1933Q9H354 126 aa-0.15□□□□□ -2.43
SMC4-225ENST00000497203 PIEZO2Q9H5I5 2752 aa-0.15□□□□□ -2.43
SMC4-225ENST00000497203 GVINP1Q7Z2Y8 2422 aa-0.15□□□□□ -2.43
SMC4-225ENST00000497203 ZANQ9Y493 2812 aa-0.15□□□□□ -2.43
SMC4-225ENST00000497203 DIP2CQ9Y2E4 1556 aa-0.15□□□□□ -2.43
SMC4-225ENST00000497203 PZPP20742 1482 aa-0.16□□□□□ -2.43
SMC4-225ENST00000497203 GAPVD1Q14C86 1478 aa-0.16□□□□□ -2.43
SMC4-225ENST00000497203 HMCN2Q8NDA2 5059 aa-0.16□□□□□ -2.43
SMC4-225ENST00000497203 LRP2P98164 4655 aa-0.16□□□□□ -2.43
SMC4-225ENST00000497203 ABCA13Q86UQ4 5058 aa-0.16□□□□□ -2.43
SMC4-225ENST00000497203 CSPG4Q6UVK1 2322 aa-0.16□□□□□ -2.43
SMC4-225ENST00000497203 LINC00587B1AMM8 73 aa-0.16□□□□□ -2.44
SMC4-225ENST00000497203 PRM1P04553 51 aa-0.16□□□□□ -2.44
SMC4-225ENST00000497203 GTF2H5Q6ZYL4 71 aa-0.16□□□□□ -2.44
SMC4-225ENST00000497203 USMG5Q96IX5 58 aa-0.16□□□□□ -2.44
SMC4-225ENST00000497203 TSC2P49815 1807 aa-0.16□□□□□ -2.44
SMC4-225ENST00000497203 DCHS2Q6V1P9 2916 aa-0.16□□□□□ -2.44
SMC4-225ENST00000497203 COL12A1Q99715 3063 aa-0.16□□□□□ -2.44
SMC4-225ENST00000497203 SETBP1Q9Y6X0 1596 aa-0.16□□□□□ -2.44
SMC4-225ENST00000497203 KMT2AQ03164 3969 aa-0.16□□□□□ -2.44
SMC4-225ENST00000497203 HIVEP1P15822 2718 aa-0.16□□□□□ -2.44
SMC4-225ENST00000497203 CCDC141Q6ZP82 1450 aa-0.16□□□□□ -2.44
SMC4-225ENST00000497203 MAGI1Q96QZ7 1491 aaPredicted RBP-0.16□□□□□ -2.44
SMC4-225ENST00000497203 DOPEY1Q5JWR5 2465 aa-0.16□□□□□ -2.44
SMC4-225ENST00000497203 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.17□□□□□ -2.44
SMC4-225ENST00000497203 NF1P21359 2839 aa-0.17□□□□□ -2.44
SMC4-225ENST00000497203 ARHGAP5Q13017 1502 aa-0.17□□□□□ -2.44
SMC4-225ENST00000497203 SPRR1BP22528 89 aa-0.17□□□□□ -2.44
SMC4-225ENST00000497203 KRTDAPP60985 99 aa-0.17□□□□□ -2.44
SMC4-225ENST00000497203 C12orf57Q99622 126 aa-0.17□□□□□ -2.44
SMC4-225ENST00000497203 LPAP08519 4548 aa-0.17□□□□□ -2.44
SMC4-225ENST00000497203 BIRC6Q9NR09 4857 aa-0.17□□□□□ -2.44
SMC4-225ENST00000497203 HECTD4Q9Y4D8 3996 aa-0.17□□□□□ -2.44
SMC4-225ENST00000497203 SPTA1P02549 2419 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms