RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ERG28Q9UKR5 140 aa9.17□□□□□ -0.94
GARNL3-220ENST00000496711 APOC4P55056 127 aa9.16□□□□□ -0.94
GARNL3-220ENST00000496711 CHCHD5Q9BSY4 110 aa9.16□□□□□ -0.94
GARNL3-220ENST00000496711 Q9H8V8 135 aa9.16□□□□□ -0.94
GARNL3-220ENST00000496711 LYRM9A8MSI8 78 aa9.15□□□□□ -0.94
GARNL3-220ENST00000496711 TCL1BO95988 128 aa9.15□□□□□ -0.94
GARNL3-220ENST00000496711 IFITM1P13164 125 aa9.15□□□□□ -0.94
GARNL3-220ENST00000496711 CIRBPQ14011 172 aaKnown RBP9.15□□□□□ -0.94
GARNL3-220ENST00000496711 GYPEP15421 78 aa9.15□□□□□ -0.95
GARNL3-220ENST00000496711 NPC2P61916 151 aa9.15□□□□□ -0.95
GARNL3-220ENST00000496711 Q1RN00 199 aa9.15□□□□□ -0.95
GARNL3-220ENST00000496711 DEFB135Q30KP9 77 aa9.15□□□□□ -0.95
GARNL3-220ENST00000496711 RNF183Q96D59 192 aa9.15□□□□□ -0.95
GARNL3-220ENST00000496711 H7C2G1 150 aa9.14□□□□□ -0.95
GARNL3-220ENST00000496711 SCGB1C2P0DMR2 95 aa9.14□□□□□ -0.95
GARNL3-220ENST00000496711 ETDBQ3ZM63 59 aa9.14□□□□□ -0.95
GARNL3-220ENST00000496711 FAM222AQ5U5X8 452 aa9.14□□□□□ -0.95
GARNL3-220ENST00000496711 ATP6V0E2Q8NHE4 81 aa9.14□□□□□ -0.95
GARNL3-220ENST00000496711 HIVEP1P15822 2718 aa9.14□□□□□ -0.95
GARNL3-220ENST00000496711 IGLV4-60A0A075B6I1 120 aa9.13□□□□□ -0.95
GARNL3-220ENST00000496711 ZNF625Q96I27 306 aaPredicted RBP9.13□□□□□ -0.95
GARNL3-220ENST00000496711 PRO0255Q9UI72 69 aa9.13□□□□□ -0.95
GARNL3-220ENST00000496711 VWFP04275 2813 aa9.13□□□□□ -0.95
GARNL3-220ENST00000496711 SH2D6Q7Z4S9 175 aa9.13□□□□□ -0.95
GARNL3-220ENST00000496711 PRIMA1Q86XR5 153 aa9.13□□□□□ -0.95
GARNL3-220ENST00000496711 DAND5Q8N907 189 aa9.13□□□□□ -0.95
GARNL3-220ENST00000496711 SMCPP49901 116 aaPredicted RBP9.12□□□□□ -0.95
GARNL3-220ENST00000496711 HERV-K104P63124 156 aa9.12□□□□□ -0.95
GARNL3-220ENST00000496711 TENM1Q9UKZ4 2725 aa9.12□□□□□ -0.95
GARNL3-220ENST00000496711 IGKV3OR2-268A0A0C4DH90 116 aa9.11□□□□□ -0.95
GARNL3-220ENST00000496711 J3QR89 54 aa9.11□□□□□ -0.95
GARNL3-220ENST00000496711 IGHV4-28A0A0C4DH34 117 aa9.11□□□□□ -0.95
GARNL3-220ENST00000496711 TRBV30A0A0K0K1B3 111 aa9.11□□□□□ -0.95
GARNL3-220ENST00000496711 WIPF1O43516 503 aa9.11□□□□□ -0.95
GARNL3-220ENST00000496711 MEIG1Q5JSS6 88 aa9.11□□□□□ -0.95
GARNL3-220ENST00000496711 WFDC9Q8NEX5 89 aa9.11□□□□□ -0.95
GARNL3-220ENST00000496711 COPS9Q8WXC6 57 aa9.11□□□□□ -0.95
GARNL3-220ENST00000496711 LINC00308Q8TCZ7 52 aa9.1□□□□□ -0.95
GARNL3-220ENST00000496711 TEP1Q99973 2627 aaKnown RBP9.1□□□□□ -0.95
GARNL3-220ENST00000496711 DEFB4AO15263 64 aa9.09□□□□□ -0.95
GARNL3-220ENST00000496711 PAX4O43316 350 aa9.09□□□□□ -0.95
GARNL3-220ENST00000496711 TRIAP1O43715 76 aa9.09□□□□□ -0.95
GARNL3-220ENST00000496711 COX7B2Q8TF08 81 aa9.09□□□□□ -0.95
GARNL3-220ENST00000496711 ICOSQ9Y6W8 199 aa9.09□□□□□ -0.95
GARNL3-220ENST00000496711 MIFP14174 115 aa9.08□□□□□ -0.96
GARNL3-220ENST00000496711 IGHV3OR16-9A0A0B4J2B5 98 aa9.08□□□□□ -0.96
GARNL3-220ENST00000496711 A0A0U1RRA0 63 aa9.08□□□□□ -0.96
GARNL3-220ENST00000496711 RPL13AP40429 203 aaKnown RBP9.08□□□□□ -0.96
GARNL3-220ENST00000496711 DAD1P61803 113 aa9.08□□□□□ -0.96
GARNL3-220ENST00000496711 Q8NAQ8 132 aa9.08□□□□□ -0.96
GARNL3-220ENST00000496711 ATRQ13535 2644 aa9.08□□□□□ -0.96
GARNL3-220ENST00000496711 A0A1B0GUV1 79 aa9.07□□□□□ -0.96
GARNL3-220ENST00000496711 PCP4P48539 62 aa9.07□□□□□ -0.96
GARNL3-220ENST00000496711 ATXN8Q156A1 80 aa9.07□□□□□ -0.96
GARNL3-220ENST00000496711 A0A087WZ39 114 aa9.06□□□□□ -0.96
GARNL3-220ENST00000496711 A0A096LPF7 62 aa9.06□□□□□ -0.96
GARNL3-220ENST00000496711 LINC00959A0A1B0GUT2 108 aa9.06□□□□□ -0.96
GARNL3-220ENST00000496711 PPDPFQ9H3Y8 114 aa9.06□□□□□ -0.96
GARNL3-220ENST00000496711 TMEM262E9PQX1 116 aa9.06□□□□□ -0.96
GARNL3-220ENST00000496711 IGHV4-30-4P0DP06 118 aa9.06□□□□□ -0.96
GARNL3-220ENST00000496711 SOSTDC1Q6X4U4 206 aa9.06□□□□□ -0.96
GARNL3-220ENST00000496711 TEN1Q86WV5 123 aa9.06□□□□□ -0.96
GARNL3-220ENST00000496711 TOMM7Q9P0U1 55 aa9.06□□□□□ -0.96
GARNL3-220ENST00000496711 CELA1Q9UNI1 258 aa9.06□□□□□ -0.96
GARNL3-220ENST00000496711 C9JAW5 83 aa9.05□□□□□ -0.96
GARNL3-220ENST00000496711 ATP5G1P05496 136 aa9.05□□□□□ -0.96
GARNL3-220ENST00000496711 COX6CP09669 75 aa9.05□□□□□ -0.96
GARNL3-220ENST00000496711 FOXI1Q12951 378 aa9.05□□□□□ -0.96
GARNL3-220ENST00000496711 M0QXV9 152 aa9.04□□□□□ -0.96
GARNL3-220ENST00000496711 SLC25A20O43772 301 aa9.04□□□□□ -0.96
GARNL3-220ENST00000496711 SS18Q15532 418 aa9.04□□□□□ -0.96
GARNL3-220ENST00000496711 LINC01620Q4KN68 170 aa9.04□□□□□ -0.96
GARNL3-220ENST00000496711 TRAV26-1A0A087WT03 109 aa9.03□□□□□ -0.96
GARNL3-220ENST00000496711 SPART-AS1P0CW21 52 aa9.03□□□□□ -0.96
GARNL3-220ENST00000496711 C5orf38Q86SI9 138 aa9.03□□□□□ -0.96
GARNL3-220ENST00000496711 PPDPFLQ8WWR9 84 aa9.03□□□□□ -0.96
GARNL3-220ENST00000496711 ANKRD29Q8N6D5 301 aa9.02□□□□□ -0.96
GARNL3-220ENST00000496711 NBEAL2Q6ZNJ1 2754 aa9.02□□□□□ -0.97
GARNL3-220ENST00000496711 CLPSL2Q6UWE3 100 aa9.02□□□□□ -0.97
GARNL3-220ENST00000496711 XCL1P47992 114 aa9.01□□□□□ -0.97
GARNL3-220ENST00000496711 C21orf62-AS1Q17RA5 79 aa9□□□□□ -0.97
GARNL3-220ENST00000496711 MIR7-3HGQ8N6C7 128 aa9□□□□□ -0.97
GARNL3-220ENST00000496711 SPATA25Q9BR10 227 aa9□□□□□ -0.97
GARNL3-220ENST00000496711 F8P00451 2351 aa9□□□□□ -0.97
GARNL3-220ENST00000496711 GAGE12HA6NDE8 117 aa9□□□□□ -0.97
GARNL3-220ENST00000496711 IBA57-AS1B1ANH7 110 aa9□□□□□ -0.97
GARNL3-220ENST00000496711 LINC01561Q8N1V8 128 aa9□□□□□ -0.97
GARNL3-220ENST00000496711 CARD19Q96LW7 228 aa9□□□□□ -0.97
GARNL3-220ENST00000496711 LINC01600Q96MT4 127 aa9□□□□□ -0.97
GARNL3-220ENST00000496711 TRBV10-2A0A0K0K1G8 114 aa8.99□□□□□ -0.97
GARNL3-220ENST00000496711 LST1O00453 97 aa8.99□□□□□ -0.97
GARNL3-220ENST00000496711 MRPL23Q16540 153 aaKnown RBP8.99□□□□□ -0.97
GARNL3-220ENST00000496711 CLEC2BQ92478 149 aa8.99□□□□□ -0.97
GARNL3-220ENST00000496711 HTN3P15516 51 aa8.98□□□□□ -0.97
GARNL3-220ENST00000496711 LINC00158P58513 81 aa8.98□□□□□ -0.97
GARNL3-220ENST00000496711 SHISA2Q6UWI4 295 aa8.98□□□□□ -0.97
GARNL3-220ENST00000496711 LINC00269Q8N2A0 174 aa8.98□□□□□ -0.97
GARNL3-220ENST00000496711 KRTAP24-1Q3LI83 254 aa8.98□□□□□ -0.97
GARNL3-220ENST00000496711 Q8IZM0 81 aa8.98□□□□□ -0.97
GARNL3-220ENST00000496711 ANGP03950 147 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms