RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 GTSF1LQ9H1H1 148 aa2.67□□□□□ -1.98
VPS52-222ENST00000495981 MED28Q9H204 178 aa2.67□□□□□ -1.98
VPS52-222ENST00000495981 MUC17Q685J3 4493 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 TRAV8-3A0A0A6YYJ7 113 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 IGKV3D-20A0A0C4DH25 116 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 A0A0J9YXV3 536 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 C17orf112F2Z3M2 114 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 INMT-MINDY4F8WBC2 141 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 G3V3Q6 166 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 SIX6O95475 246 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 IFNA1P01562 189 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 TCRAP04437 139 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 PFN1P07737 140 aaKnown RBP2.66□□□□□ -1.98
VPS52-222ENST00000495981 ADCYAP1P18509 176 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 TAS2R45P59539 299 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 RHEBQ15382 184 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 PDZD11Q5EBL8 140 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 ZFP2Q6ZN57 461 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 Q86TA4 180 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 CYB561D1Q8N8Q1 229 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 KCNS1Q96KK3 526 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 SAMD10Q9BYL1 202 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 NMES1Q9C002 83 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 SPANXCQ9NY87 97 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 NAT8Q9UHE5 227 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 VAX2Q9UIW0 290 aa2.66□□□□□ -1.98
VPS52-222ENST00000495981 H3BVH4 76 aa2.65□□□□□ -1.99
VPS52-222ENST00000495981 HMGB3O15347 200 aaKnown RBP2.65□□□□□ -1.99
VPS52-222ENST00000495981 DSCR10P59022 87 aa2.65□□□□□ -1.99
VPS52-222ENST00000495981 RPL37AP61513 92 aaKnown RBP2.65□□□□□ -1.99
VPS52-222ENST00000495981 CIRBPQ14011 172 aaKnown RBP2.65□□□□□ -1.99
VPS52-222ENST00000495981 KRTAP26-1Q6PEX3 210 aa2.65□□□□□ -1.99
VPS52-222ENST00000495981 SMIM20Q8N5G0 67 aa2.65□□□□□ -1.99
VPS52-222ENST00000495981 C5orf17Q8NAS9 161 aa2.65□□□□□ -1.99
VPS52-222ENST00000495981 CMTM2Q8TAZ6 248 aa2.65□□□□□ -1.99
VPS52-222ENST00000495981 PPP1R1CQ8WVI7 109 aa2.65□□□□□ -1.99
VPS52-222ENST00000495981 FAM104AQ969W3 186 aa2.65□□□□□ -1.99
VPS52-222ENST00000495981 YPEL4Q96NS1 127 aa2.65□□□□□ -1.99
VPS52-222ENST00000495981 HIST1H2BLQ99880 126 aa2.65□□□□□ -1.99
VPS52-222ENST00000495981 PSMG3Q9BT73 122 aaPredicted RBP2.65□□□□□ -1.99
VPS52-222ENST00000495981 IL36BQ9NZH7 164 aa2.65□□□□□ -1.99
VPS52-222ENST00000495981 IGKV2D-24A0A075B6R9 120 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 A0A087WWC5 75 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 A0A087WX48 190 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 PGPA6NDG6 321 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 A8MWV9 139 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 H0Y9J4 135 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 ESDP10768 282 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 GCHFRP30047 84 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 CXCL5P42830 114 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 UBE2D3P61077 147 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 UBE2D2P62837 147 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 MPV17L2Q567V2 206 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 FA2HQ7L5A8 372 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 NDFIP1Q9BT67 221 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 CHCHD7Q9BUK0 85 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 SMIM3Q9BZL3 60 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 SH3BGRL3Q9H299 93 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 RPS10P5Q9NQ39 176 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 KLK12Q9UKR0 248 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 ERG28Q9UKR5 140 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 ARL2-SNX15V9GYD0 113 aa2.64□□□□□ -1.99
VPS52-222ENST00000495981 SMIM26A0A096LP01 95 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 BORCS7-ASMTA0A0B4J1R7 106 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 RBFOX3A6NFN3 312 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 TAAR5O14804 337 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 HIST1H2BKO60814 126 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 SH2D1AO60880 128 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 HIST1H2BJP06899 126 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 HIST1H2BOP23527 126 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 RPL12P30050 165 aaKnown RBP2.63□□□□□ -1.99
VPS52-222ENST00000495981 HIST1H2BBP33778 126 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 NMUP48645 174 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 HIST1H2BDP58876 126 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 HIST1H2BCP62807 126 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 HIST2H2BEQ16778 126 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 ACOT6Q3I5F7 207 aaPredicted RBP2.63□□□□□ -1.99
VPS52-222ENST00000495981 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.63□□□□□ -1.99
VPS52-222ENST00000495981 ENHOQ6UWT2 76 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 CAMK2N1Q7Z7J9 78 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 PRNTQ86SH4 94 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 Q8N976 141 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 OR2T35Q8NGX2 323 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 HIST1H2BHQ93079 126 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 UBE2WQ96B02 151 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 RMI2Q96E14 147 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 ZC2HC1AQ96GY0 325 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 HIST1H2BNQ99877 126 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 HIST1H2BMQ99879 126 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 TMEM126AQ9H061 195 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 PRR34Q9NV39 138 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 SS18L2Q9UHA2 77 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 HSPB8Q9UJY1 196 aa2.63□□□□□ -1.99
VPS52-222ENST00000495981 SSPOA2VEC9 5147 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 TRBV6-8A0A0A6YYG3 113 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 A0A0D9SG52 128 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 TRBV10-1A0A0K0K1A3 114 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 HLA-DQA1P01909 254 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 OR5AL1P0C617 328 aa2.62□□□□□ -1.99
VPS52-222ENST00000495981 FABP4P15090 132 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms