RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 SNCGO76070 127 aa9.25□□□□□ -0.93
PTPN7-217ENST00000495688 MEIG1Q5JSS6 88 aa9.25□□□□□ -0.93
PTPN7-217ENST00000495688 ZNF843Q8N446 348 aa9.24□□□□□ -0.93
PTPN7-217ENST00000495688 ANAPC13Q9BS18 74 aa9.24□□□□□ -0.93
PTPN7-217ENST00000495688 H3BT86 120 aa9.24□□□□□ -0.93
PTPN7-217ENST00000495688 GAGE7O76087 117 aa9.24□□□□□ -0.93
PTPN7-217ENST00000495688 GAGE12FP0CL80 117 aa9.24□□□□□ -0.93
PTPN7-217ENST00000495688 GAGE12GP0CL81 117 aa9.24□□□□□ -0.93
PTPN7-217ENST00000495688 GAGE12IP0CL82 117 aa9.24□□□□□ -0.93
PTPN7-217ENST00000495688 DAZ2Q13117 558 aaKnown RBP9.24□□□□□ -0.93
PTPN7-217ENST00000495688 DAZ4Q86SG3 579 aaKnown RBP9.24□□□□□ -0.93
PTPN7-217ENST00000495688 DAZ3Q9NR90 486 aaKnown RBP9.24□□□□□ -0.93
PTPN7-217ENST00000495688 IGKV3OR2-268A0A0C4DH90 116 aa9.23□□□□□ -0.93
PTPN7-217ENST00000495688 TRBV10-1A0A0K0K1A3 114 aa9.23□□□□□ -0.93
PTPN7-217ENST00000495688 RPL35AP18077 110 aaKnown RBP9.23□□□□□ -0.93
PTPN7-217ENST00000495688 SHISA2Q6UWI4 295 aa9.23□□□□□ -0.93
PTPN7-217ENST00000495688 C15orf53Q8NAA6 179 aa9.23□□□□□ -0.93
PTPN7-217ENST00000495688 TRAV25A0A0B4J276 109 aa9.23□□□□□ -0.93
PTPN7-217ENST00000495688 GAGE2BQ13066 116 aa9.23□□□□□ -0.93
PTPN7-217ENST00000495688 GAGE2EQ4V326 116 aa9.23□□□□□ -0.93
PTPN7-217ENST00000495688 GAGE2DQ9UEU5 116 aa9.23□□□□□ -0.93
PTPN7-217ENST00000495688 CSDC2Q9Y534 153 aaKnown RBP9.23□□□□□ -0.93
PTPN7-217ENST00000495688 PDZD2O15018 2839 aa9.23□□□□□ -0.93
PTPN7-217ENST00000495688 PLAC8L1A1L4L8 177 aa9.22□□□□□ -0.93
PTPN7-217ENST00000495688 TTC32Q5I0X7 151 aa9.22□□□□□ -0.93
PTPN7-217ENST00000495688 TRGV2A0A075B6R0 118 aa9.22□□□□□ -0.93
PTPN7-217ENST00000495688 NHLRC4P0CG21 123 aaPredicted RBP9.22□□□□□ -0.93
PTPN7-217ENST00000495688 FAM19A3Q7Z5A8 133 aa9.21□□□□□ -0.93
PTPN7-217ENST00000495688 UBE2L6O14933 153 aa9.21□□□□□ -0.94
PTPN7-217ENST00000495688 HIST2H2BCQ6DN03 193 aa9.21□□□□□ -0.94
PTPN7-217ENST00000495688 LRRC75A-AS1Q8N1F1 130 aa9.21□□□□□ -0.94
PTPN7-217ENST00000495688 TMEM243Q9BU79 118 aa9.2□□□□□ -0.94
PTPN7-217ENST00000495688 COX7A2LO14548 114 aa9.19□□□□□ -0.94
PTPN7-217ENST00000495688 GAGE6Q13070 117 aa9.19□□□□□ -0.94
PTPN7-217ENST00000495688 TMEM86BQ8N661 226 aa9.19□□□□□ -0.94
PTPN7-217ENST00000495688 TOMM7Q9P0U1 55 aa9.19□□□□□ -0.94
PTPN7-217ENST00000495688 NDUFV3P56181 108 aaKnown RBP9.18□□□□□ -0.94
PTPN7-217ENST00000495688 IGLV4-60A0A075B6I1 120 aa9.18□□□□□ -0.94
PTPN7-217ENST00000495688 FAM218AQ96MZ4 157 aa9.18□□□□□ -0.94
PTPN7-217ENST00000495688 LINC01006Q8NI28 216 aa9.18□□□□□ -0.94
PTPN7-217ENST00000495688 HIVEP2P31629 2446 aa9.17□□□□□ -0.94
PTPN7-217ENST00000495688 TRGV4A0A0C4DH28 118 aa9.17□□□□□ -0.94
PTPN7-217ENST00000495688 C19orf73Q9NVV2 129 aa9.17□□□□□ -0.94
PTPN7-217ENST00000495688 DEFB121Q5J5C9 76 aa9.16□□□□□ -0.94
PTPN7-217ENST00000495688 MIR7-3HGQ8N6C7 128 aa9.16□□□□□ -0.94
PTPN7-217ENST00000495688 C16orf74Q96GX8 76 aa9.16□□□□□ -0.94
PTPN7-217ENST00000495688 CSNK1G2-AS1Q8NCQ2 148 aa9.16□□□□□ -0.94
PTPN7-217ENST00000495688 HERV-K104P63124 156 aa9.15□□□□□ -0.94
PTPN7-217ENST00000495688 LINC00337Q8N6G1 96 aa9.15□□□□□ -0.95
PTPN7-217ENST00000495688 COX7B2Q8TF08 81 aa9.15□□□□□ -0.95
PTPN7-217ENST00000495688 HELZ2Q9BYK8 2649 aaKnown RBP9.14□□□□□ -0.95
PTPN7-217ENST00000495688 TRBV6-4A0A1B0GX49 114 aa9.14□□□□□ -0.95
PTPN7-217ENST00000495688 Q9HAA7 133 aa9.14□□□□□ -0.95
PTPN7-217ENST00000495688 B5MCH6 92 aa9.14□□□□□ -0.95
PTPN7-217ENST00000495688 CHCHD5Q9BSY4 110 aa9.14□□□□□ -0.95
PTPN7-217ENST00000495688 C22orf24Q9Y442 160 aa9.14□□□□□ -0.95
PTPN7-217ENST00000495688 IGKV2-28A0A075B6P5 120 aa9.13□□□□□ -0.95
PTPN7-217ENST00000495688 IGKV2D-28P01615 120 aa9.13□□□□□ -0.95
PTPN7-217ENST00000495688 IGLV1-51P01701 117 aa9.13□□□□□ -0.95
PTPN7-217ENST00000495688 FHL2Q14192 279 aa9.13□□□□□ -0.95
PTPN7-217ENST00000495688 COPS9Q8WXC6 57 aa9.13□□□□□ -0.95
PTPN7-217ENST00000495688 TRBV6-8A0A0A6YYG3 113 aa9.13□□□□□ -0.95
PTPN7-217ENST00000495688 FAM240AA0A1B0GVK7 77 aa9.13□□□□□ -0.95
PTPN7-217ENST00000495688 CCDC179H3BU77 68 aa9.13□□□□□ -0.95
PTPN7-217ENST00000495688 BAALC-AS2P0C853 105 aa9.13□□□□□ -0.95
PTPN7-217ENST00000495688 C5orf38Q86SI9 138 aa9.13□□□□□ -0.95
PTPN7-217ENST00000495688 UNC79Q9P2D8 2635 aa9.12□□□□□ -0.95
PTPN7-217ENST00000495688 Q6Q795 121 aa9.12□□□□□ -0.95
PTPN7-217ENST00000495688 IGHV3OR16-9A0A0B4J2B5 98 aa9.12□□□□□ -0.95
PTPN7-217ENST00000495688 DEFB130BP0DP73 79 aa9.12□□□□□ -0.95
PTPN7-217ENST00000495688 DEFB130AP0DP74 79 aa9.12□□□□□ -0.95
PTPN7-217ENST00000495688 LINC00158P58513 81 aa9.12□□□□□ -0.95
PTPN7-217ENST00000495688 OVOL2Q9BRP0 275 aa9.12□□□□□ -0.95
PTPN7-217ENST00000495688 C11orf68Q9H3H3 251 aaKnown RBP9.12□□□□□ -0.95
PTPN7-217ENST00000495688 SND1-IT1Q9HBX3 110 aa9.12□□□□□ -0.95
PTPN7-217ENST00000495688 SS18L2Q9UHA2 77 aa9.12□□□□□ -0.95
PTPN7-217ENST00000495688 PFN2P35080 140 aa9.11□□□□□ -0.95
PTPN7-217ENST00000495688 SMCR5Q8TEV8 140 aa9.11□□□□□ -0.95
PTPN7-217ENST00000495688 TENM1Q9UKZ4 2725 aa9.11□□□□□ -0.95
PTPN7-217ENST00000495688 CRPP02741 224 aa9.1□□□□□ -0.95
PTPN7-217ENST00000495688 KRTAP1-1Q07627 177 aa9.1□□□□□ -0.95
PTPN7-217ENST00000495688 FASNP49327 2511 aaKnown RBP9.1□□□□□ -0.95
PTPN7-217ENST00000495688 TRACP01848 142 aa9.1□□□□□ -0.95
PTPN7-217ENST00000495688 CCL18P55774 89 aa9.09□□□□□ -0.95
PTPN7-217ENST00000495688 NOTCH2Q04721 2471 aa9.09□□□□□ -0.95
PTPN7-217ENST00000495688 A0A087WYN8 130 aa9.08□□□□□ -0.96
PTPN7-217ENST00000495688 TRAV13-2A0A0B4J235 113 aa9.08□□□□□ -0.96
PTPN7-217ENST00000495688 RPL28P46779 137 aaKnown RBP9.08□□□□□ -0.96
PTPN7-217ENST00000495688 SMIM11BQ8TCY0 68 aa9.08□□□□□ -0.96
PTPN7-217ENST00000495688 CLPSL2Q6UWE3 100 aa9.08□□□□□ -0.96
PTPN7-217ENST00000495688 A0A096LPF7 62 aa9.08□□□□□ -0.96
PTPN7-217ENST00000495688 MRPL23Q16540 153 aaKnown RBP9.08□□□□□ -0.96
PTPN7-217ENST00000495688 C9orf129Q5T035 196 aaKnown RBP9.08□□□□□ -0.96
PTPN7-217ENST00000495688 A0A087WZ39 114 aa9.07□□□□□ -0.96
PTPN7-217ENST00000495688 RNASE1P07998 156 aaKnown RBP9.07□□□□□ -0.96
PTPN7-217ENST00000495688 ATP5G1P05496 136 aa9.07□□□□□ -0.96
PTPN7-217ENST00000495688 XCL1P47992 114 aa9.07□□□□□ -0.96
PTPN7-217ENST00000495688 CMC4P56277 68 aaPredicted RBP9.07□□□□□ -0.96
PTPN7-217ENST00000495688 LINC00959A0A1B0GUT2 108 aa9.06□□□□□ -0.96
PTPN7-217ENST00000495688 TRBV7-7A0A0K0K1E9 115 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms