RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 PDCD11Q14690 1871 aaKnown RBP0.41□□□□□ -2.34
COPS3-211ENST00000495640 ADGRL2O95490 1459 aa0.41□□□□□ -2.34
COPS3-211ENST00000495640 ABCC10Q5T3U5 1492 aa0.41□□□□□ -2.34
COPS3-211ENST00000495640 PTPRZ1P23471 2315 aaPredicted RBP0.41□□□□□ -2.34
COPS3-211ENST00000495640 MGPP08493 103 aa0.4□□□□□ -2.35
COPS3-211ENST00000495640 Q6JHZ5 121 aa0.4□□□□□ -2.35
COPS3-211ENST00000495640 ANKRD26Q9UPS8 1709 aa0.4□□□□□ -2.35
COPS3-211ENST00000495640 TEX14Q8IWB6 1497 aa0.4□□□□□ -2.35
COPS3-211ENST00000495640 M0R143 59 aa0.39□□□□□ -2.35
COPS3-211ENST00000495640 M0R3E3 92 aa0.39□□□□□ -2.35
COPS3-211ENST00000495640 GNGT2O14610 69 aa0.39□□□□□ -2.35
COPS3-211ENST00000495640 USF3Q68DE3 2245 aa0.39□□□□□ -2.35
COPS3-211ENST00000495640 CCNB3Q8WWL7 1395 aa0.39□□□□□ -2.35
COPS3-211ENST00000495640 GAPVD1Q14C86 1478 aa0.39□□□□□ -2.35
COPS3-211ENST00000495640 AKAP12Q02952 1782 aa0.39□□□□□ -2.35
COPS3-211ENST00000495640 NUP188Q5SRE5 1749 aa0.38□□□□□ -2.35
COPS3-211ENST00000495640 DNAJC13O75165 2243 aa0.38□□□□□ -2.35
COPS3-211ENST00000495640 ERCC6L2Q5T890 1561 aa0.38□□□□□ -2.35
COPS3-211ENST00000495640 ANKRD36BQ8N2N9 1353 aa0.38□□□□□ -2.35
COPS3-211ENST00000495640 FAM223BA6NKX1 122 aa0.38□□□□□ -2.35
COPS3-211ENST00000495640 S100A8P05109 93 aa0.38□□□□□ -2.35
COPS3-211ENST00000495640 TRAPPC2P0DI81 140 aa0.38□□□□□ -2.35
COPS3-211ENST00000495640 TRAPPC2BP0DI82 140 aa0.38□□□□□ -2.35
COPS3-211ENST00000495640 TMEM263Q8WUH6 116 aaKnown RBP0.38□□□□□ -2.35
COPS3-211ENST00000495640 BIVM-ERCC5R4GMW8 1640 aa0.38□□□□□ -2.35
COPS3-211ENST00000495640 DOPEY2Q9Y3R5 2298 aa0.38□□□□□ -2.35
COPS3-211ENST00000495640 A0A0D9SFI3 127 aa0.37□□□□□ -2.35
COPS3-211ENST00000495640 H7BZZ5 65 aa0.37□□□□□ -2.35
COPS3-211ENST00000495640 I3L2K1 104 aa0.37□□□□□ -2.35
COPS3-211ENST00000495640 FYCO1Q9BQS8 1478 aa0.36□□□□□ -2.35
COPS3-211ENST00000495640 SAA2P0DJI9 122 aaPredicted RBP0.36□□□□□ -2.35
COPS3-211ENST00000495640 C10orf113Q5VZT2 155 aa0.36□□□□□ -2.35
COPS3-211ENST00000495640 SNHG12Q9BXW3 62 aa0.36□□□□□ -2.35
COPS3-211ENST00000495640 DPY30Q9C005 99 aa0.36□□□□□ -2.35
COPS3-211ENST00000495640 FAIMQ9NVQ4 179 aa0.36□□□□□ -2.35
COPS3-211ENST00000495640 FAT4Q6V0I7 4981 aa0.36□□□□□ -2.35
COPS3-211ENST00000495640 PIEZO2Q9H5I5 2752 aa0.36□□□□□ -2.35
COPS3-211ENST00000495640 LRP1Q07954 4544 aaKnown RBP0.36□□□□□ -2.35
COPS3-211ENST00000495640 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
COPS3-211ENST00000495640 MLH3Q9UHC1 1453 aa0.35□□□□□ -2.35
COPS3-211ENST00000495640 CELSR1Q9NYQ6 3014 aa0.35□□□□□ -2.35
COPS3-211ENST00000495640 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
COPS3-211ENST00000495640 NDUFC1O43677 76 aa0.35□□□□□ -2.35
COPS3-211ENST00000495640 PMCHL2Q9BQD1 86 aa0.35□□□□□ -2.35
COPS3-211ENST00000495640 CACFD1Q9UGQ2 172 aa0.35□□□□□ -2.35
COPS3-211ENST00000495640 PRO0255Q9UI72 69 aa0.35□□□□□ -2.35
COPS3-211ENST00000495640 MAGI1Q96QZ7 1491 aaPredicted RBP0.35□□□□□ -2.35
COPS3-211ENST00000495640 PTPRQQ9UMZ3 2332 aa0.35□□□□□ -2.35
COPS3-211ENST00000495640 PAPPAQ13219 1627 aa0.35□□□□□ -2.35
COPS3-211ENST00000495640 UNC79Q9P2D8 2635 aa0.34□□□□□ -2.35
COPS3-211ENST00000495640 A0A0G2JND7 137 aa0.34□□□□□ -2.36
COPS3-211ENST00000495640 LINC00032P0C843 101 aa0.34□□□□□ -2.36
COPS3-211ENST00000495640 PKIAP61925 76 aa0.34□□□□□ -2.36
COPS3-211ENST00000495640 UBA52P62987 128 aaKnown RBP0.34□□□□□ -2.36
COPS3-211ENST00000495640 Q5BKY6 102 aa0.34□□□□□ -2.36
COPS3-211ENST00000495640 TP53AIP1Q9HCN2 124 aa0.34□□□□□ -2.36
COPS3-211ENST00000495640 AHNAKQ09666 5890 aaKnown RBP0.34□□□□□ -2.36
COPS3-211ENST00000495640 AKAP6Q13023 2319 aa0.33□□□□□ -2.36
COPS3-211ENST00000495640 ARHGEF12Q9NZN5 1544 aa0.33□□□□□ -2.36
COPS3-211ENST00000495640 A0A1B0GWA3 101 aa0.33□□□□□ -2.36
COPS3-211ENST00000495640 ATOX1O00244 68 aa0.33□□□□□ -2.36
COPS3-211ENST00000495640 LCN9Q8WX39 176 aa0.33□□□□□ -2.36
COPS3-211ENST00000495640 LINC00846Q9NV44 126 aa0.33□□□□□ -2.36
COPS3-211ENST00000495640 AP4S1Q9Y587 144 aa0.33□□□□□ -2.36
COPS3-211ENST00000495640 SPCS1Q9Y6A9 102 aa0.33□□□□□ -2.36
COPS3-211ENST00000495640 C1orf167Q5SNV9 1468 aa0.33□□□□□ -2.36
COPS3-211ENST00000495640 TULP4Q9NRJ4 1543 aa0.33□□□□□ -2.36
COPS3-211ENST00000495640 MAST4O15021 2626 aa0.33□□□□□ -2.36
COPS3-211ENST00000495640 MARF1Q9Y4F3 1742 aaKnown RBP0.33□□□□□ -2.36
COPS3-211ENST00000495640 SPTBN1Q01082 2364 aaKnown RBP0.32□□□□□ -2.36
COPS3-211ENST00000495640 GVINP1Q7Z2Y8 2422 aa0.32□□□□□ -2.36
COPS3-211ENST00000495640 TRBV25-1A0A075B6N4 114 aa0.32□□□□□ -2.36
COPS3-211ENST00000495640 COL5A1-AS1Q5SY13 56 aa0.32□□□□□ -2.36
COPS3-211ENST00000495640 SERP2Q8N6R1 65 aa0.32□□□□□ -2.36
COPS3-211ENST00000495640 LINC01600Q96MT4 127 aa0.32□□□□□ -2.36
COPS3-211ENST00000495640 TRGV9Q99603 122 aa0.32□□□□□ -2.36
COPS3-211ENST00000495640 NRXN1Q9ULB1 1477 aa0.32□□□□□ -2.36
COPS3-211ENST00000495640 IGSF10Q6WRI0 2623 aa0.31□□□□□ -2.36
COPS3-211ENST00000495640 TRBV7-7A0A0K0K1E9 115 aa0.31□□□□□ -2.36
COPS3-211ENST00000495640 S100A3P33764 101 aa0.31□□□□□ -2.36
COPS3-211ENST00000495640 ASIPP42127 132 aa0.31□□□□□ -2.36
COPS3-211ENST00000495640 Q8IZM0 81 aa0.31□□□□□ -2.36
COPS3-211ENST00000495640 PKDREJQ9NTG1 2253 aa0.31□□□□□ -2.36
COPS3-211ENST00000495640 TROQ12816 1431 aaPredicted RBP0.3□□□□□ -2.36
COPS3-211ENST00000495640 XRN1Q8IZH2 1706 aaKnown RBP0.3□□□□□ -2.36
COPS3-211ENST00000495640 URB1O60287 2271 aaKnown RBP0.3□□□□□ -2.36
COPS3-211ENST00000495640 VWFP04275 2813 aa0.3□□□□□ -2.36
COPS3-211ENST00000495640 PAPPA2Q9BXP8 1791 aa0.3□□□□□ -2.36
COPS3-211ENST00000495640 A0A087WVE0 104 aa0.3□□□□□ -2.36
COPS3-211ENST00000495640 CHD6Q8TD26 2715 aa0.3□□□□□ -2.36
COPS3-211ENST00000495640 UBR5O95071 2799 aaPredicted RBP0.3□□□□□ -2.36
COPS3-211ENST00000495640 NHSL1Q5SYE7 1610 aa0.3□□□□□ -2.36
COPS3-211ENST00000495640 ANKRD36A6QL64 1941 aa0.29□□□□□ -2.36
COPS3-211ENST00000495640 MUC5BQ9HC84 5762 aaPredicted RBP0.29□□□□□ -2.36
COPS3-211ENST00000495640 TRBV6-1A0A0K0K1D8 114 aa0.29□□□□□ -2.36
COPS3-211ENST00000495640 LINC00959A0A1B0GUT2 108 aa0.29□□□□□ -2.36
COPS3-211ENST00000495640 C7orf77A4D0Y5 90 aa0.29□□□□□ -2.36
COPS3-211ENST00000495640 SYS1-DBNDD2H3BUS1 97 aa0.29□□□□□ -2.36
COPS3-211ENST00000495640 DEFB123Q8N688 67 aa0.29□□□□□ -2.36
COPS3-211ENST00000495640 VAMP8Q9BV40 100 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms