RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
SNX13-210ENST00000494402 A0A1B0GVY2 172 aa3.29□□□□□ -1.88
SNX13-210ENST00000494402 D6R8Y8 96 aa3.29□□□□□ -1.88
SNX13-210ENST00000494402 Q6ZQY7 126 aa3.29□□□□□ -1.88
SNX13-210ENST00000494402 MUSTN1Q8IVN3 82 aa3.29□□□□□ -1.88
SNX13-210ENST00000494402 RGPD2P0DJD1 1756 aa3.28□□□□□ -1.88
SNX13-210ENST00000494402 MGPP08493 103 aa3.28□□□□□ -1.88
SNX13-210ENST00000494402 MAST4O15021 2626 aa3.28□□□□□ -1.88
SNX13-210ENST00000494402 PRRC2BQ5JSZ5 2229 aaKnown RBP3.28□□□□□ -1.88
SNX13-210ENST00000494402 CLASP1Q7Z460 1538 aa3.28□□□□□ -1.88
SNX13-210ENST00000494402 CACNA1BQ00975 2339 aa3.27□□□□□ -1.89
SNX13-210ENST00000494402 CFAP43Q8NDM7 1665 aa3.27□□□□□ -1.89
SNX13-210ENST00000494402 A0A087WWC5 75 aa3.27□□□□□ -1.89
SNX13-210ENST00000494402 J3QRE1 110 aa3.27□□□□□ -1.89
SNX13-210ENST00000494402 M0R3E3 92 aa3.27□□□□□ -1.89
SNX13-210ENST00000494402 PP632Q6XCG6 107 aa3.27□□□□□ -1.89
SNX13-210ENST00000494402 LAMA4Q16363 1823 aa3.27□□□□□ -1.89
SNX13-210ENST00000494402 TNRC6BQ9UPQ9 1833 aaKnown RBP3.27□□□□□ -1.89
SNX13-210ENST00000494402 EFCAB5A4FU69 1503 aa3.27□□□□□ -1.89
SNX13-210ENST00000494402 USP9XQ93008 2570 aaPredicted RBP3.27□□□□□ -1.89
SNX13-210ENST00000494402 KNDC1Q76NI1 1749 aa3.27□□□□□ -1.89
SNX13-210ENST00000494402 GBF1Q92538 1859 aa3.26□□□□□ -1.89
SNX13-210ENST00000494402 PHRF1Q9P1Y6 1649 aaKnown RBP3.26□□□□□ -1.89
SNX13-210ENST00000494402 NOTCH3Q9UM47 2321 aa3.26□□□□□ -1.89
SNX13-210ENST00000494402 LRRC7Q96NW7 1537 aa3.26□□□□□ -1.89
SNX13-210ENST00000494402 Q96NJ1 140 aa3.26□□□□□ -1.89
SNX13-210ENST00000494402 TET1Q8NFU7 2136 aa3.26□□□□□ -1.89
SNX13-210ENST00000494402 SCN7AQ01118 1682 aa3.26□□□□□ -1.89
SNX13-210ENST00000494402 KIF21BO75037 1637 aa3.26□□□□□ -1.89
SNX13-210ENST00000494402 ICE1Q9Y2F5 2266 aa3.26□□□□□ -1.89
SNX13-210ENST00000494402 SIPA1L3O60292 1781 aaPredicted RBP3.25□□□□□ -1.89
SNX13-210ENST00000494402 SPINT3P49223 89 aa3.25□□□□□ -1.89
SNX13-210ENST00000494402 ZNF137PP52743 207 aa3.25□□□□□ -1.89
SNX13-210ENST00000494402 SMIM4Q8WVI0 70 aa3.25□□□□□ -1.89
SNX13-210ENST00000494402 OBSCN-AS1Q96MR7 158 aa3.25□□□□□ -1.89
SNX13-210ENST00000494402 CCL19Q99731 98 aa3.25□□□□□ -1.89
SNX13-210ENST00000494402 EEA1Q15075 1411 aa3.25□□□□□ -1.89
SNX13-210ENST00000494402 PIEZO1Q92508 2521 aa3.25□□□□□ -1.89
SNX13-210ENST00000494402 COL5A1P20908 1838 aaPredicted RBP3.24□□□□□ -1.89
SNX13-210ENST00000494402 MADDQ8WXG6 1647 aa3.24□□□□□ -1.89
SNX13-210ENST00000494402 TRGV1A0A0A0MS02 117 aa3.24□□□□□ -1.89
SNX13-210ENST00000494402 IGKV4-1P06312 121 aa3.24□□□□□ -1.89
SNX13-210ENST00000494402 COX17Q14061 63 aa3.24□□□□□ -1.89
SNX13-210ENST00000494402 UNQ6190/PRO20217Q6UXQ8 127 aa3.24□□□□□ -1.89
SNX13-210ENST00000494402 C6orf201Q7Z4U5 140 aa3.24□□□□□ -1.89
SNX13-210ENST00000494402 LINC00846Q9NV44 126 aa3.24□□□□□ -1.89
SNX13-210ENST00000494402 TMEM131LA2VDJ0 1609 aa3.23□□□□□ -1.89
SNX13-210ENST00000494402 TRAV1-2A0A0B4J238 106 aa3.23□□□□□ -1.89
SNX13-210ENST00000494402 BRD3OSQ6XYD6 125 aa3.23□□□□□ -1.89
SNX13-210ENST00000494402 ANKRD11Q6UB99 2663 aaPredicted RBP3.23□□□□□ -1.89
SNX13-210ENST00000494402 KDM3BQ7LBC6 1761 aa3.23□□□□□ -1.89
SNX13-210ENST00000494402 BDP1A6H8Y1 2624 aa3.23□□□□□ -1.89
SNX13-210ENST00000494402 NAV2Q8IVL1 2488 aa3.22□□□□□ -1.89
SNX13-210ENST00000494402 COL6A3P12111 3177 aa3.22□□□□□ -1.89
SNX13-210ENST00000494402 FLNBO75369 2602 aaKnown RBP3.22□□□□□ -1.89
SNX13-210ENST00000494402 KRTAP13-4Q3LI77 160 aa3.22□□□□□ -1.89
SNX13-210ENST00000494402 Q6JHZ5 121 aa3.22□□□□□ -1.89
SNX13-210ENST00000494402 EP400Q96L91 3159 aa3.21□□□□□ -1.9
SNX13-210ENST00000494402 A0A087WVE0 104 aa3.21□□□□□ -1.9
SNX13-210ENST00000494402 ACYP2P14621 99 aa3.21□□□□□ -1.9
SNX13-210ENST00000494402 FDCSPQ8NFU4 85 aa3.21□□□□□ -1.9
SNX13-210ENST00000494402 ALKQ9UM73 1620 aa3.21□□□□□ -1.9
SNX13-210ENST00000494402 SPRR4Q96PI1 79 aa3.2□□□□□ -1.9
SNX13-210ENST00000494402 FASNP49327 2511 aaKnown RBP3.2□□□□□ -1.9
SNX13-210ENST00000494402 SZT2Q5T011 3432 aa3.19□□□□□ -1.9
SNX13-210ENST00000494402 PRB2P02812 416 aaPredicted RBP3.19□□□□□ -1.9
SNX13-210ENST00000494402 ATP5EP2Q5VTU8 51 aa3.19□□□□□ -1.9
SNX13-210ENST00000494402 C10orf99Q6UWK7 81 aa3.19□□□□□ -1.9
SNX13-210ENST00000494402 PROK2Q9HC23 129 aa3.19□□□□□ -1.9
SNX13-210ENST00000494402 CHD6Q8TD26 2715 aa3.18□□□□□ -1.9
SNX13-210ENST00000494402 ZNF462Q96JM2 2506 aa3.18□□□□□ -1.9
SNX13-210ENST00000494402 DEFB103AP81534 67 aa3.18□□□□□ -1.9
SNX13-210ENST00000494402 UBE2D4Q9Y2X8 147 aa3.18□□□□□ -1.9
SNX13-210ENST00000494402 ARFGEF2Q9Y6D5 1785 aa3.17□□□□□ -1.9
SNX13-210ENST00000494402 MYO7BQ6PIF6 2116 aa3.17□□□□□ -1.9
SNX13-210ENST00000494402 GCHFRP30047 84 aa3.17□□□□□ -1.9
SNX13-210ENST00000494402 ZMYM4Q5VZL5 1548 aa3.17□□□□□ -1.9
SNX13-210ENST00000494402 KRTAP10-3P60369 221 aa3.16□□□□□ -1.9
SNX13-210ENST00000494402 INTS1Q8N201 2190 aaKnown RBP3.16□□□□□ -1.9
SNX13-210ENST00000494402 PTPN13Q12923 2485 aa3.16□□□□□ -1.9
SNX13-210ENST00000494402 RGPD1P0DJD0 1748 aa3.16□□□□□ -1.9
SNX13-210ENST00000494402 USP24Q9UPU5 2620 aa3.15□□□□□ -1.9
SNX13-210ENST00000494402 TRBV30A0A0K0K1B3 111 aa3.15□□□□□ -1.91
SNX13-210ENST00000494402 IFI27P40305 119 aaPredicted RBP3.15□□□□□ -1.91
SNX13-210ENST00000494402 KRTAP10-1P60331 282 aa3.15□□□□□ -1.91
SNX13-210ENST00000494402 NUP188Q5SRE5 1749 aa3.14□□□□□ -1.91
SNX13-210ENST00000494402 IFT172Q9UG01 1749 aa3.14□□□□□ -1.91
SNX13-210ENST00000494402 A0A087WXM4 84 aa3.14□□□□□ -1.91
SNX13-210ENST00000494402 COX8AP10176 69 aa3.14□□□□□ -1.91
SNX13-210ENST00000494402 TMEM263Q8WUH6 116 aaKnown RBP3.14□□□□□ -1.91
SNX13-210ENST00000494402 PLAC8Q9NZF1 115 aa3.14□□□□□ -1.91
SNX13-210ENST00000494402 KIAA0556O60303 1618 aa3.14□□□□□ -1.91
SNX13-210ENST00000494402 GOLGB1Q14789 3259 aaKnown RBP3.14□□□□□ -1.91
SNX13-210ENST00000494402 TEP1Q99973 2627 aaKnown RBP3.14□□□□□ -1.91
SNX13-210ENST00000494402 PREX1Q8TCU6 1659 aa3.14□□□□□ -1.91
SNX13-210ENST00000494402 VWDEQ8N2E2 1590 aa3.13□□□□□ -1.91
SNX13-210ENST00000494402 TARBP1Q13395 1621 aaKnown RBP3.13□□□□□ -1.91
SNX13-210ENST00000494402 KRTAP10-5P60370 271 aa3.13□□□□□ -1.91
SNX13-210ENST00000494402 DEFB107AQ8IZN7 70 aa3.13□□□□□ -1.91
SNX13-210ENST00000494402 ZCCHC13Q8WW36 166 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms