RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 PLAC8Q9NZF1 115 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 TMEM14CQ9P0S9 112 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 PAPPAQ13219 1627 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 CASP8AP2Q9UKL3 1982 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 CRYBG1Q9Y4K1 1723 aa1.17□□□□□ -2.22
PTPN12-212ENST00000494248 NHSQ6T4R5 1651 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 PREX1Q8TCU6 1659 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 ANKRD50Q9ULJ7 1429 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 MYO18AQ92614 2054 aaKnown RBP1.16□□□□□ -2.22
PTPN12-212ENST00000494248 CICQ96RK0 1608 aaPredicted RBP1.16□□□□□ -2.22
PTPN12-212ENST00000494248 IFT172Q9UG01 1749 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 A0A087WTM6 91 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 A0A087WVE0 104 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 LOC110117498A0A087WWA1 95 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 A0A1B0GUT8 65 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 LRCOL1A6NCL2 159 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 H3BRN7 92 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 INE1O15225 51 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 NDUFB1O75438 58 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 IL9P15248 144 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 HMGA1P17096 107 aaKnown RBP1.16□□□□□ -2.22
PTPN12-212ENST00000494248 ZNF137PP52743 207 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 FXYD3Q14802 87 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 LINC00322Q6ZN03 302 aaPredicted RBP1.16□□□□□ -2.22
PTPN12-212ENST00000494248 SPRR4Q96PI1 79 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 WFDC6Q9BQY6 131 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 SNURFQ9Y675 71 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 VWDEQ8N2E2 1590 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 SCN7AQ01118 1682 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 SHPRHQ149N8 1683 aa1.16□□□□□ -2.22
PTPN12-212ENST00000494248 SIPA1L3O60292 1781 aaPredicted RBP1.16□□□□□ -2.22
PTPN12-212ENST00000494248 ALKQ9UM73 1620 aa1.15□□□□□ -2.22
PTPN12-212ENST00000494248 CTXND1A0A1B0GTU2 59 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 IGKV2-29A2NJV5 120 aaPredicted RBP1.15□□□□□ -2.23
PTPN12-212ENST00000494248 M0R2N4 97 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 M0R3E3 92 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 IGLV3-19P01714 112 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 S100A3P33764 101 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 COX17Q14061 63 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 KRTAP13-2Q52LG2 175 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 PRR9Q5T870 116 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 C5orf56Q8N8D9 126 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 FDCSPQ8NFU4 85 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 RREB1Q92766 1687 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 DLEC1Q9Y238 1755 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 CABIN1Q9Y6J0 2220 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 FREM3P0C091 2139 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 LAMA4Q16363 1823 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 COL4A2P08572 1712 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 LRP6O75581 1613 aa1.15□□□□□ -2.23
PTPN12-212ENST00000494248 NUP214P35658 2090 aaPredicted RBP1.14□□□□□ -2.23
PTPN12-212ENST00000494248 EXPH5Q8NEV8 1989 aa1.14□□□□□ -2.23
PTPN12-212ENST00000494248 TRGV4A0A0C4DH28 118 aa1.14□□□□□ -2.23
PTPN12-212ENST00000494248 IGKV2-24A0A0C4DH68 120 aa1.14□□□□□ -2.23
PTPN12-212ENST00000494248 H0Y9P7 68 aa1.14□□□□□ -2.23
PTPN12-212ENST00000494248 IFI6P09912 130 aa1.14□□□□□ -2.23
PTPN12-212ENST00000494248 GDF5OSQ5U4N7 250 aa1.14□□□□□ -2.23
PTPN12-212ENST00000494248 SMIM4Q8WVI0 70 aa1.14□□□□□ -2.23
PTPN12-212ENST00000494248 KIAA0556O60303 1618 aa1.14□□□□□ -2.23
PTPN12-212ENST00000494248 PHRF1Q9P1Y6 1649 aaKnown RBP1.14□□□□□ -2.23
PTPN12-212ENST00000494248 BIVM-ERCC5R4GMW8 1640 aa1.14□□□□□ -2.23
PTPN12-212ENST00000494248 ABCC6O95255 1503 aa1.14□□□□□ -2.23
PTPN12-212ENST00000494248 CPS1P31327 1500 aa1.14□□□□□ -2.23
PTPN12-212ENST00000494248 DOCK9Q9BZ29 2069 aa1.14□□□□□ -2.23
PTPN12-212ENST00000494248 LOC285556D6RIA3 1793 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 WIZO95785 1651 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 SNRNP200O75643 2136 aaKnown RBP1.13□□□□□ -2.23
PTPN12-212ENST00000494248 SIP14410 1827 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 ARFGEF1Q9Y6D6 1849 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 NACAE9PAV3 2078 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.13□□□□□ -2.23
PTPN12-212ENST00000494248 TRBV30A0A0K0K1B3 111 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 SPRR5A0A1B0GTR4 108 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 LINC01549A6NIU2 74 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 FXYD4P59646 89 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 SPATA8Q6RVD6 105 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 COA5Q86WW8 74 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 DEFB107AQ8IZN7 70 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 LINC00304Q8N9R0 145 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 TMEM263Q8WUH6 116 aaKnown RBP1.13□□□□□ -2.23
PTPN12-212ENST00000494248 ZNF625Q96I27 306 aaPredicted RBP1.13□□□□□ -2.23
PTPN12-212ENST00000494248 LINC00208Q96KT6 92 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 Q96NJ1 140 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 NHSL1Q5SYE7 1610 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 EIF2AK4Q9P2K8 1649 aaKnown RBP1.13□□□□□ -2.23
PTPN12-212ENST00000494248 KIAA0586Q9BVV6 1533 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 KIAA2026Q5HYC2 2103 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 COL4A1P02462 1669 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 DLG5Q8TDM6 1919 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 ERCC6L2Q5T890 1561 aa1.13□□□□□ -2.23
PTPN12-212ENST00000494248 PDCD11Q14690 1871 aaKnown RBP1.12□□□□□ -2.23
PTPN12-212ENST00000494248 ABCA5Q8WWZ7 1642 aa1.12□□□□□ -2.23
PTPN12-212ENST00000494248 ADCY10Q96PN6 1610 aa1.12□□□□□ -2.23
PTPN12-212ENST00000494248 EFCAB6Q5THR3 1501 aa1.12□□□□□ -2.23
PTPN12-212ENST00000494248 TRGV1A0A0A0MS02 117 aa1.12□□□□□ -2.23
PTPN12-212ENST00000494248 TRAV1-2A0A0B4J238 106 aa1.12□□□□□ -2.23
PTPN12-212ENST00000494248 LCE6AA0A183 80 aa1.12□□□□□ -2.23
PTPN12-212ENST00000494248 IGKV4-1P06312 121 aa1.12□□□□□ -2.23
PTPN12-212ENST00000494248 NREPQ16612 68 aa1.12□□□□□ -2.23
PTPN12-212ENST00000494248 TOMM5Q8N4H5 51 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms