RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 A8MWV9 139 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 TMEM262E9PQX1 116 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 SNAI2O43623 268 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 ANGP03950 147 aaKnown RBP1.74□□□□□ -2.13
PTCD3-218ENST00000493430 RBX1P62877 108 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 SERF2P84101 59 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 LYZL1Q6UWQ5 148 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 Q6ZSA8 131 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 S100A7AQ86SG5 101 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 BAGE2Q86Y30 109 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 ZFP82Q8N141 532 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 LINC00269Q8N2A0 174 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 C15orf56Q8N910 161 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 MBD3L1Q8WWY6 194 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 FRZBQ92765 325 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 FMC1Q96HJ9 113 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 PRADC1Q9BSG0 188 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 TMEM70Q9BUB7 260 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 TMEM242Q9NWH2 141 aa1.74□□□□□ -2.13
PTCD3-218ENST00000493430 TRBV7-3A0A075B6L6 115 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 A0A096LNI7 61 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 TRBV6-8A0A0A6YYG3 113 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 A0A0J9YXV3 536 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 TRBV6-1A0A0K0K1D8 114 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 M0QY20 66 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 OXTP01178 125 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 SEC11BP0C7V7 166 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 MT1HL1P0DM35 61 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 BCL2P10415 239 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 RAB4AP20338 218 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 GNG4P50150 75 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 SULT1A2P50226 295 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 MEF2BQ02080 365 aaPredicted RBP1.73□□□□□ -2.13
PTCD3-218ENST00000493430 COTL1Q14019 142 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 ZNF345Q14585 488 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 SAPCD1Q5SSQ6 148 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 SPANXN1Q5VSR9 72 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 CBLN2Q8IUK8 224 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 FER1L6-AS1Q8NA97 138 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 GATD1Q8NB37 220 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 HIST1H2BAQ96A08 127 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 MED9Q9NWA0 146 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 V9GYY9 64 aa1.73□□□□□ -2.13
PTCD3-218ENST00000493430 A0A087WX48 190 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 A0A1B0GW15 77 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 HMSDA8MTL9 139 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 GATCO43716 136 aaKnown RBP1.72□□□□□ -2.13
PTCD3-218ENST00000493430 CRPP02741 224 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 RAB5AP20339 215 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 NTF3P20783 257 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 CTRLP40313 264 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 REG3AQ06141 175 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 KIAA0087Q14695 138 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 DNLZQ5SXM8 178 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 MRPL54Q6P161 138 aaKnown RBP1.72□□□□□ -2.13
PTCD3-218ENST00000493430 ZFP2Q6ZN57 461 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 TEX43Q6ZNM6 134 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 Q6ZUT4 128 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 AMN1Q8IY45 258 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 LINC00469Q8N7U9 141 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 C7orf33Q8WU49 177 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 RNF185Q96GF1 192 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 AP1S3Q96PC3 154 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 CHCHD7Q9BUK0 85 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 RPP21Q9H633 154 aaKnown RBP1.72□□□□□ -2.13
PTCD3-218ENST00000493430 ZFP30Q9Y2G7 519 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 URGCP-MRPS24S4R325 110 aa1.72□□□□□ -2.13
PTCD3-218ENST00000493430 A0A0D9SG52 128 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 IFNA1P01562 189 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 P01737 135 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 SRP19P09132 144 aaKnown RBP1.71□□□□□ -2.14
PTCD3-218ENST00000493430 OR5AL1P0C617 328 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 XCL1P47992 114 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 RAB4BP61018 213 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 RPL37AP61513 92 aaKnown RBP1.71□□□□□ -2.14
PTCD3-218ENST00000493430 RPL39P62891 51 aaKnown RBP1.71□□□□□ -2.14
PTCD3-218ENST00000493430 COX6A2Q02221 97 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 RPL18AQ02543 176 aaKnown RBP1.71□□□□□ -2.14
PTCD3-218ENST00000493430 COA6Q5JTJ3 125 aaKnown RBP1.71□□□□□ -2.14
PTCD3-218ENST00000493430 RASL11AQ6T310 242 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 AKAP14Q86UN6 197 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 TCTE3Q8IZS6 198 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 C10orf126Q8N4M7 172 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 PTH2Q96A98 100 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 TMEM243Q9BU79 118 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 CHAC1Q9BUX1 264 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 MANBALQ9NQG1 85 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 LPAP08519 4548 aa1.71□□□□□ -2.14
PTCD3-218ENST00000493430 TNXBP22105 4242 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 TRBV25-1A0A075B6N4 114 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 TRAV8-3A0A0A6YYJ7 113 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 IGHV1-24A0A0C4DH33 117 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 A0A0J9YXY3 114 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 A0A1W2PNN7 141 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 SDHAF1A6NFY7 115 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 ZNF727A8MUV8 499 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 UMAD1C9J7I0 102 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 TCAPO15273 167 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 CCL25O15444 150 aa1.7□□□□□ -2.14
PTCD3-218ENST00000493430 NDUFS6O75380 124 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 233.8 ms