RNA–Protein interactions for RNA: ENST00000492983.1

ATP13A3-209, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-209ENST00000492983 DOPEY1Q5JWR5 2465 aa-0.3□□□□□ -2.46
ATP13A3-209ENST00000492983 IGLC1P0CG04 106 aa-0.3□□□□□ -2.46
ATP13A3-209ENST00000492983 MYCBP2O75592 4640 aa-0.3□□□□□ -2.46
ATP13A3-209ENST00000492983 LRP2P98164 4655 aa-0.31□□□□□ -2.46
ATP13A3-209ENST00000492983 PRM1P04553 51 aa-0.31□□□□□ -2.46
ATP13A3-209ENST00000492983 ATP5EP56381 51 aaPredicted RBP-0.31□□□□□ -2.46
ATP13A3-209ENST00000492983 UBA52P62987 128 aaKnown RBP-0.31□□□□□ -2.46
ATP13A3-209ENST00000492983 FAM223AQ8IWN6 122 aa-0.31□□□□□ -2.46
ATP13A3-209ENST00000492983 SVBPQ8N300 66 aa-0.31□□□□□ -2.46
ATP13A3-209ENST00000492983 MANBALQ9NQG1 85 aa-0.31□□□□□ -2.46
ATP13A3-209ENST00000492983 CDC42SE2Q9NRR3 84 aa-0.31□□□□□ -2.46
ATP13A3-209ENST00000492983 POLA1P09884 1462 aaPredicted RBP-0.31□□□□□ -2.46
ATP13A3-209ENST00000492983 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.31□□□□□ -2.46
ATP13A3-209ENST00000492983 SMG6Q86US8 1419 aaKnown RBP-0.31□□□□□ -2.46
ATP13A3-209ENST00000492983 NSD3Q9BZ95 1437 aa-0.31□□□□□ -2.46
ATP13A3-209ENST00000492983 S100A1P23297 94 aa-0.32□□□□□ -2.46
ATP13A3-209ENST00000492983 KRTAP19-7Q3SYF9 63 aa-0.32□□□□□ -2.46
ATP13A3-209ENST00000492983 SFTA2Q6UW10 78 aa-0.32□□□□□ -2.46
ATP13A3-209ENST00000492983 ZANQ9Y493 2812 aa-0.32□□□□□ -2.46
ATP13A3-209ENST00000492983 WDR7Q9Y4E6 1490 aa-0.33□□□□□ -2.46
ATP13A3-209ENST00000492983 COX6B1P14854 86 aa-0.33□□□□□ -2.46
ATP13A3-209ENST00000492983 GNG4P50150 75 aa-0.33□□□□□ -2.46
ATP13A3-209ENST00000492983 PPP3R1P63098 170 aa-0.33□□□□□ -2.46
ATP13A3-209ENST00000492983 SARNPP82979 210 aaKnown RBP-0.33□□□□□ -2.46
ATP13A3-209ENST00000492983 C10orf113Q5VZT2 155 aa-0.33□□□□□ -2.46
ATP13A3-209ENST00000492983 FDCSPQ8NFU4 85 aa-0.33□□□□□ -2.46
ATP13A3-209ENST00000492983 TMEM263Q8WUH6 116 aaKnown RBP-0.33□□□□□ -2.46
ATP13A3-209ENST00000492983 SCAPERQ9BY12 1400 aa-0.33□□□□□ -2.46
ATP13A3-209ENST00000492983 SCN7AQ01118 1682 aa-0.33□□□□□ -2.46
ATP13A3-209ENST00000492983 CREBBPQ92793 2442 aa-0.34□□□□□ -2.46
ATP13A3-209ENST00000492983 KMT2CQ8NEZ4 4911 aaKnown RBP-0.34□□□□□ -2.46
ATP13A3-209ENST00000492983 F6UZH7 168 aa-0.34□□□□□ -2.46
ATP13A3-209ENST00000492983 K7EQZ3 153 aa-0.34□□□□□ -2.46
ATP13A3-209ENST00000492983 SPRR2DP22532 72 aa-0.34□□□□□ -2.46
ATP13A3-209ENST00000492983 KMT2AQ03164 3969 aa-0.34□□□□□ -2.46
ATP13A3-209ENST00000492983 Q0VG73 95 aa-0.34□□□□□ -2.46
ATP13A3-209ENST00000492983 KRTAP20-2Q3LI61 65 aa-0.34□□□□□ -2.46
ATP13A3-209ENST00000492983 IER3IP1Q9Y5U9 82 aa-0.34□□□□□ -2.46
ATP13A3-209ENST00000492983 HSPG2P98160 4391 aa-0.34□□□□□ -2.46
ATP13A3-209ENST00000492983 PDZD2O15018 2839 aa-0.35□□□□□ -2.47
ATP13A3-209ENST00000492983 SPRR1BP22528 89 aa-0.35□□□□□ -2.47
ATP13A3-209ENST00000492983 WHAMMP3Q1A5X7 153 aa-0.35□□□□□ -2.47
ATP13A3-209ENST00000492983 FAM167A-AS1Q96KT0 104 aa-0.35□□□□□ -2.47
ATP13A3-209ENST00000492983 GNG8Q9UK08 70 aa-0.35□□□□□ -2.47
ATP13A3-209ENST00000492983 HERC1Q15751 4861 aa-0.35□□□□□ -2.47
ATP13A3-209ENST00000492983 HERC2O95714 4834 aa-0.35□□□□□ -2.47
ATP13A3-209ENST00000492983 NF1P21359 2839 aa-0.35□□□□□ -2.47
ATP13A3-209ENST00000492983 EIF4G3O43432 1585 aaKnown RBP-0.36□□□□□ -2.47
ATP13A3-209ENST00000492983 PIEZO2Q9H5I5 2752 aa-0.36□□□□□ -2.47
ATP13A3-209ENST00000492983 HMGXB3Q12766 1538 aa-0.36□□□□□ -2.47
ATP13A3-209ENST00000492983 CORTO00230 105 aa-0.36□□□□□ -2.47
ATP13A3-209ENST00000492983 SPRR4Q96PI1 79 aa-0.36□□□□□ -2.47
ATP13A3-209ENST00000492983 FXYD6Q9H0Q3 95 aa-0.36□□□□□ -2.47
ATP13A3-209ENST00000492983 MAP1BP46821 2468 aaKnown RBP-0.36□□□□□ -2.47
ATP13A3-209ENST00000492983 PCLOQ9Y6V0 5065 aa-0.36□□□□□ -2.47
ATP13A3-209ENST00000492983 FLNAP21333 2647 aaKnown RBP-0.36□□□□□ -2.47
ATP13A3-209ENST00000492983 EHBP1L1Q8N3D4 1523 aa-0.37□□□□□ -2.47
ATP13A3-209ENST00000492983 TOP2BQ02880 1626 aa-0.37□□□□□ -2.47
ATP13A3-209ENST00000492983 TRAPPC2P0DI81 140 aa-0.37□□□□□ -2.47
ATP13A3-209ENST00000492983 TRAPPC2BP0DI82 140 aa-0.37□□□□□ -2.47
ATP13A3-209ENST00000492983 NRKQ7Z2Y5 1582 aa-0.37□□□□□ -2.47
ATP13A3-209ENST00000492983 NEBP20929 6669 aa-0.38□□□□□ -2.47
ATP13A3-209ENST00000492983 HECTD4Q9Y4D8 3996 aa-0.38□□□□□ -2.47
ATP13A3-209ENST00000492983 SPTA1P02549 2419 aa-0.38□□□□□ -2.47
ATP13A3-209ENST00000492983 HIVEP1P15822 2718 aa-0.38□□□□□ -2.47
ATP13A3-209ENST00000492983 KRTAP19-8Q3LI54 63 aa-0.38□□□□□ -2.47
ATP13A3-209ENST00000492983 LAMA5O15230 3695 aa-0.38□□□□□ -2.47
ATP13A3-209ENST00000492983 FAT1Q14517 4588 aa-0.38□□□□□ -2.47
ATP13A3-209ENST00000492983 LPAP08519 4548 aa-0.39□□□□□ -2.47
ATP13A3-209ENST00000492983 SETXQ7Z333 2677 aaKnown RBP-0.39□□□□□ -2.47
ATP13A3-209ENST00000492983 NAP1L6A6NFF2 107 aa-0.39□□□□□ -2.47
ATP13A3-209ENST00000492983 DEFB123Q8N688 67 aa-0.39□□□□□ -2.47
ATP13A3-209ENST00000492983 LINC01600Q96MT4 127 aa-0.39□□□□□ -2.47
ATP13A3-209ENST00000492983 TENM2Q9NT68 2774 aa-0.4□□□□□ -2.47
ATP13A3-209ENST00000492983 WNK1Q9H4A3 2382 aa-0.4□□□□□ -2.47
ATP13A3-209ENST00000492983 MAGI1Q96QZ7 1491 aaPredicted RBP-0.4□□□□□ -2.47
ATP13A3-209ENST00000492983 TRBV7-4A0A0J9YYF1 115 aa-0.4□□□□□ -2.47
ATP13A3-209ENST00000492983 COX6CP09669 75 aa-0.4□□□□□ -2.47
ATP13A3-209ENST00000492983 SNCAP37840 140 aa-0.4□□□□□ -2.47
ATP13A3-209ENST00000492983 UBE2D3P61077 147 aa-0.4□□□□□ -2.47
ATP13A3-209ENST00000492983 UBE2D2P62837 147 aa-0.4□□□□□ -2.47
ATP13A3-209ENST00000492983 PRO1854Q9UHT4 67 aa-0.4□□□□□ -2.47
ATP13A3-209ENST00000492983 CC2D2AQ9P2K1 1620 aa-0.4□□□□□ -2.47
ATP13A3-209ENST00000492983 SETD2Q9BYW2 2564 aaPredicted RBP-0.4□□□□□ -2.47
ATP13A3-209ENST00000492983 RYR3Q15413 4870 aa-0.41□□□□□ -2.47
ATP13A3-209ENST00000492983 DCHS2Q6V1P9 2916 aa-0.41□□□□□ -2.47
ATP13A3-209ENST00000492983 GAPVD1Q14C86 1478 aa-0.41□□□□□ -2.47
ATP13A3-209ENST00000492983 A0A1B0GWA3 101 aa-0.41□□□□□ -2.48
ATP13A3-209ENST00000492983 FAM223BA6NKX1 122 aa-0.41□□□□□ -2.48
ATP13A3-209ENST00000492983 LINC00587B1AMM8 73 aa-0.41□□□□□ -2.48
ATP13A3-209ENST00000492983 LOC730098B7Z3J9 87 aa-0.41□□□□□ -2.48
ATP13A3-209ENST00000492983 MT4P47944 62 aa-0.41□□□□□ -2.48
ATP13A3-209ENST00000492983 LCN9Q8WX39 176 aa-0.41□□□□□ -2.48
ATP13A3-209ENST00000492983 C12orf57Q99622 126 aa-0.41□□□□□ -2.48
ATP13A3-209ENST00000492983 C2orf88Q9BSF0 95 aa-0.41□□□□□ -2.48
ATP13A3-209ENST00000492983 URB1O60287 2271 aaKnown RBP-0.41□□□□□ -2.48
ATP13A3-209ENST00000492983 PZPP20742 1482 aa-0.41□□□□□ -2.48
ATP13A3-209ENST00000492983 MAP1AP78559 2803 aaPredicted RBP-0.42□□□□□ -2.48
ATP13A3-209ENST00000492983 NBEAL1Q6ZS30 2694 aa-0.42□□□□□ -2.48
ATP13A3-209ENST00000492983 LINC00959A0A1B0GUT2 108 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms