RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 IGLV5-39A0A0G2JS06 123 aa6.31□□□□□ -1.4
SMARCC1-208ENST00000492896 SMIM1B2RUZ4 78 aa6.31□□□□□ -1.4
SMARCC1-208ENST00000492896 NANOS2P60321 138 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-208ENST00000492896 DEFB121Q5J5C9 76 aa6.31□□□□□ -1.4
SMARCC1-208ENST00000492896 ZFAND6Q6FIF0 208 aa6.31□□□□□ -1.4
SMARCC1-208ENST00000492896 NDUFA12Q9UI09 145 aa6.31□□□□□ -1.4
SMARCC1-208ENST00000492896 A0A0J9YXY3 114 aa6.3□□□□□ -1.4
SMARCC1-208ENST00000492896 LINC00959A0A1B0GUT2 108 aa6.3□□□□□ -1.4
SMARCC1-208ENST00000492896 TMEM238LA0A1B0GVL6 79 aa6.3□□□□□ -1.4
SMARCC1-208ENST00000492896 A6NJY4 79 aa6.3□□□□□ -1.4
SMARCC1-208ENST00000492896 TMEM238C9JI98 176 aa6.3□□□□□ -1.4
SMARCC1-208ENST00000492896 NDUFA1O15239 70 aa6.3□□□□□ -1.4
SMARCC1-208ENST00000492896 SRSF9Q13242 221 aaKnown RBP eCLIP6.3□□□□□ -1.4
SMARCC1-208ENST00000492896 SS18Q15532 418 aa6.3□□□□□ -1.4
SMARCC1-208ENST00000492896 C10orf126Q8N4M7 172 aa6.3□□□□□ -1.4
SMARCC1-208ENST00000492896 MRAPQ8TCY5 172 aa6.3□□□□□ -1.4
SMARCC1-208ENST00000492896 DEFB131BA0A096LNP1 70 aa6.29□□□□□ -1.4
SMARCC1-208ENST00000492896 K7EP13 123 aa6.29□□□□□ -1.4
SMARCC1-208ENST00000492896 CCL25O15444 150 aa6.29□□□□□ -1.4
SMARCC1-208ENST00000492896 SMIM13P0DJ93 91 aa6.29□□□□□ -1.4
SMARCC1-208ENST00000492896 CLPSL2Q6UWE3 100 aa6.29□□□□□ -1.4
SMARCC1-208ENST00000492896 Q6ZVH6 145 aa6.29□□□□□ -1.4
SMARCC1-208ENST00000492896 NHP2Q9NX24 153 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-208ENST00000492896 IGHV3OR16-9A0A0B4J2B5 98 aa6.28□□□□□ -1.4
SMARCC1-208ENST00000492896 IGHV3-30P01768 117 aa6.28□□□□□ -1.4
SMARCC1-208ENST00000492896 ANGP03950 147 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-208ENST00000492896 IGHV3-30-5P0DP03 117 aa6.28□□□□□ -1.4
SMARCC1-208ENST00000492896 LYPD5Q6UWN5 251 aa6.28□□□□□ -1.4
SMARCC1-208ENST00000492896 LURAP1LQ8IV03 231 aa6.28□□□□□ -1.4
SMARCC1-208ENST00000492896 PKD1L1Q8TDX9 2849 aa6.27□□□□□ -1.41
SMARCC1-208ENST00000492896 A0A087WZ39 114 aa6.27□□□□□ -1.41
SMARCC1-208ENST00000492896 TRAV10A0A0B4J240 114 aa6.27□□□□□ -1.41
SMARCC1-208ENST00000492896 C9orf118A6NHY6 69 aa6.27□□□□□ -1.41
SMARCC1-208ENST00000492896 K7ERJ3 54 aa6.27□□□□□ -1.41
SMARCC1-208ENST00000492896 TIMM17BO60830 172 aa6.27□□□□□ -1.41
SMARCC1-208ENST00000492896 LINC00269Q8N2A0 174 aa6.27□□□□□ -1.41
SMARCC1-208ENST00000492896 RAB37Q96AX2 223 aa6.27□□□□□ -1.41
SMARCC1-208ENST00000492896 SPANXDQ9BXN6 97 aa6.27□□□□□ -1.41
SMARCC1-208ENST00000492896 Q9H8V8 135 aa6.27□□□□□ -1.41
SMARCC1-208ENST00000492896 SPANXCQ9NY87 97 aa6.27□□□□□ -1.41
SMARCC1-208ENST00000492896 A0A1B0GWB2 263 aa6.26□□□□□ -1.41
SMARCC1-208ENST00000492896 XCL1P47992 114 aa6.26□□□□□ -1.41
SMARCC1-208ENST00000492896 HERV-K104P63124 156 aa6.26□□□□□ -1.41
SMARCC1-208ENST00000492896 REG3AQ06141 175 aa6.26□□□□□ -1.41
SMARCC1-208ENST00000492896 VAMP3Q15836 100 aa6.26□□□□□ -1.41
SMARCC1-208ENST00000492896 C5orf38Q86SI9 138 aa6.26□□□□□ -1.41
SMARCC1-208ENST00000492896 LINC01561Q8N1V8 128 aa6.26□□□□□ -1.41
SMARCC1-208ENST00000492896 Q8N3U1 123 aa6.26□□□□□ -1.41
SMARCC1-208ENST00000492896 COX7B2Q8TF08 81 aa6.26□□□□□ -1.41
SMARCC1-208ENST00000492896 LITAFQ99732 161 aa6.26□□□□□ -1.41
SMARCC1-208ENST00000492896 DNAH9Q9NYC9 4486 aa6.26□□□□□ -1.41
SMARCC1-208ENST00000492896 H3BUT2 72 aa6.25□□□□□ -1.41
SMARCC1-208ENST00000492896 RPL24P83731 157 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-208ENST00000492896 CIRBPQ14011 172 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-208ENST00000492896 MIAQ16674 131 aa6.25□□□□□ -1.41
SMARCC1-208ENST00000492896 C15orf53Q8NAA6 179 aa6.25□□□□□ -1.41
SMARCC1-208ENST00000492896 ZNF625Q96I27 306 aaPredicted RBP6.25□□□□□ -1.41
SMARCC1-208ENST00000492896 TOMM7Q9P0U1 55 aa6.25□□□□□ -1.41
SMARCC1-208ENST00000492896 CRPP02741 224 aa6.24□□□□□ -1.41
SMARCC1-208ENST00000492896 MEIG1Q5JSS6 88 aa6.24□□□□□ -1.41
SMARCC1-208ENST00000492896 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
SMARCC1-208ENST00000492896 CD164L2Q6UWJ8 174 aa6.24□□□□□ -1.41
SMARCC1-208ENST00000492896 WFDC10BQ8IUB3 73 aa6.24□□□□□ -1.41
SMARCC1-208ENST00000492896 MUSTN1Q8IVN3 82 aa6.24□□□□□ -1.41
SMARCC1-208ENST00000492896 CHCHD10Q8WYQ3 142 aaPredicted RBP6.24□□□□□ -1.41
SMARCC1-208ENST00000492896 KLK12Q9UKR0 248 aa6.24□□□□□ -1.41
SMARCC1-208ENST00000492896 COX7A2LO14548 114 aa6.23□□□□□ -1.41
SMARCC1-208ENST00000492896 APOMO95445 188 aa6.23□□□□□ -1.41
SMARCC1-208ENST00000492896 IGHV3-33P01772 117 aa6.23□□□□□ -1.41
SMARCC1-208ENST00000492896 IFITM1P13164 125 aa6.23□□□□□ -1.41
SMARCC1-208ENST00000492896 ESRGQ1W209 222 aa6.23□□□□□ -1.41
SMARCC1-208ENST00000492896 SFTA2Q6UW10 78 aa6.23□□□□□ -1.41
SMARCC1-208ENST00000492896 B9D2Q9BPU9 175 aa6.23□□□□□ -1.41
SMARCC1-208ENST00000492896 NAA38Q9BRA0 125 aaKnown RBP6.23□□□□□ -1.41
SMARCC1-208ENST00000492896 PRR34Q9NV39 138 aa6.23□□□□□ -1.41
SMARCC1-208ENST00000492896 TENM3Q9P273 2699 aa6.23□□□□□ -1.41
SMARCC1-208ENST00000492896 NOTCH1P46531 2555 aa6.23□□□□□ -1.41
SMARCC1-208ENST00000492896 IGLV10-54A0A075B6I4 117 aa6.22□□□□□ -1.41
SMARCC1-208ENST00000492896 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.22□□□□□ -1.41
SMARCC1-208ENST00000492896 A0A1W2PPM0 123 aa6.22□□□□□ -1.41
SMARCC1-208ENST00000492896 A4D1N5 150 aa6.22□□□□□ -1.41
SMARCC1-208ENST00000492896 IGLL5B9A064 214 aa6.22□□□□□ -1.41
SMARCC1-208ENST00000492896 PRSS2P07478 247 aa6.22□□□□□ -1.41
SMARCC1-208ENST00000492896 ADAMTSL4-AS1Q5T5F5 129 aa6.22□□□□□ -1.41
SMARCC1-208ENST00000492896 COPS9Q8WXC6 57 aa6.22□□□□□ -1.41
SMARCC1-208ENST00000492896 A0A0B4J2C4 111 aa6.21□□□□□ -1.42
SMARCC1-208ENST00000492896 GAGE12HA6NDE8 117 aa6.21□□□□□ -1.42
SMARCC1-208ENST00000492896 CFC1BP0CG36 223 aa6.21□□□□□ -1.42
SMARCC1-208ENST00000492896 CFC1P0CG37 223 aa6.21□□□□□ -1.42
SMARCC1-208ENST00000492896 FABP2P12104 132 aa6.21□□□□□ -1.42
SMARCC1-208ENST00000492896 MALP21145 153 aa6.21□□□□□ -1.42
SMARCC1-208ENST00000492896 FOXI1Q12951 378 aa6.21□□□□□ -1.42
SMARCC1-208ENST00000492896 UBE2V1Q13404 147 aa6.21□□□□□ -1.42
SMARCC1-208ENST00000492896 Q8IZM0 81 aa6.21□□□□□ -1.42
SMARCC1-208ENST00000492896 TRAV8-4A0A0B4J246 113 aa6.2□□□□□ -1.42
SMARCC1-208ENST00000492896 K7EP34 96 aa6.2□□□□□ -1.42
SMARCC1-208ENST00000492896 CXCL5P42830 114 aa6.2□□□□□ -1.42
SMARCC1-208ENST00000492896 NPC2P61916 151 aa6.2□□□□□ -1.42
SMARCC1-208ENST00000492896 LINC01556Q5JQF7 62 aa6.2□□□□□ -1.42
SMARCC1-208ENST00000492896 CFAP161Q6P656 301 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms