RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 HIGD1AQ9Y241 93 aa2.56□□□□□ -2
SND1-216ENST00000492840 A0A087WTM6 91 aa2.55□□□□□ -2
SND1-216ENST00000492840 TRBV7-6A0A0J9YX20 115 aa2.55□□□□□ -2
SND1-216ENST00000492840 KRTAP10-7P60409 375 aaPredicted RBP2.55□□□□□ -2
SND1-216ENST00000492840 CCDC58Q4VC31 144 aa2.55□□□□□ -2
SND1-216ENST00000492840 SPANXN5Q5MJ07 72 aa2.55□□□□□ -2
SND1-216ENST00000492840 Q5XG85 94 aa2.55□□□□□ -2
SND1-216ENST00000492840 LINC00467Q9BRT7 94 aa2.55□□□□□ -2
SND1-216ENST00000492840 TAF9BQ9HBM6 251 aa2.55□□□□□ -2
SND1-216ENST00000492840 TRAV1-1A0A0B4J248 108 aa2.54□□□□□ -2
SND1-216ENST00000492840 TRGV4A0A0C4DH28 118 aa2.54□□□□□ -2
SND1-216ENST00000492840 H3BMG7 143 aa2.54□□□□□ -2
SND1-216ENST00000492840 BAALC-AS2P0C853 105 aa2.54□□□□□ -2
SND1-216ENST00000492840 UBBP0CG47 229 aa2.54□□□□□ -2
SND1-216ENST00000492840 ZNF846Q147U1 533 aa2.54□□□□□ -2
SND1-216ENST00000492840 MORN2Q502X0 79 aa2.54□□□□□ -2
SND1-216ENST00000492840 OR8J3Q8NGG0 315 aa2.54□□□□□ -2
SND1-216ENST00000492840 SPACA4Q8TDM5 124 aa2.54□□□□□ -2
SND1-216ENST00000492840 ARL11Q969Q4 196 aa2.54□□□□□ -2
SND1-216ENST00000492840 SLC50A1Q9BRV3 221 aa2.54□□□□□ -2
SND1-216ENST00000492840 V9GYS6 101 aa2.54□□□□□ -2
SND1-216ENST00000492840 TRAV13-1A0A0B4J241 112 aa2.53□□□□□ -2
SND1-216ENST00000492840 TMEM30CPA0ZSE6 113 aa2.53□□□□□ -2
SND1-216ENST00000492840 DPM2O94777 84 aa2.53□□□□□ -2
SND1-216ENST00000492840 GYPBP06028 91 aa2.53□□□□□ -2
SND1-216ENST00000492840 RBP2P50120 134 aa2.53□□□□□ -2
SND1-216ENST00000492840 RNASE10Q5GAN6 216 aaKnown RBP2.53□□□□□ -2
SND1-216ENST00000492840 LINC01590Q5TEZ4 76 aa2.53□□□□□ -2
SND1-216ENST00000492840 Q6ZSA8 131 aa2.53□□□□□ -2
SND1-216ENST00000492840 ZNF833PQ6ZTB9 187 aa2.53□□□□□ -2
SND1-216ENST00000492840 C7orf65Q6ZTY9 151 aa2.53□□□□□ -2
SND1-216ENST00000492840 TCTE3Q8IZS6 198 aa2.53□□□□□ -2
SND1-216ENST00000492840 OTOSQ8NHW6 89 aa2.53□□□□□ -2
SND1-216ENST00000492840 CHCHD1Q96BP2 118 aaKnown RBP2.53□□□□□ -2
SND1-216ENST00000492840 TRBV27A0A0K0K1C4 114 aa2.52□□□□□ -2.01
SND1-216ENST00000492840 A6NIN4 97 aa2.52□□□□□ -2.01
SND1-216ENST00000492840 H3BRN7 92 aa2.52□□□□□ -2.01
SND1-216ENST00000492840 SAA2P0DJI9 122 aaPredicted RBP2.52□□□□□ -2.01
SND1-216ENST00000492840 RPL13AP3Q6NVV1 102 aa2.52□□□□□ -2.01
SND1-216ENST00000492840 CGREF1Q99674 301 aa2.52□□□□□ -2.01
SND1-216ENST00000492840 RETNLBQ9BQ08 111 aa2.52□□□□□ -2.01
SND1-216ENST00000492840 COPZ2Q9P299 210 aa2.52□□□□□ -2.01
SND1-216ENST00000492840 IFNGP01579 166 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 PRH1P02810 166 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 MT-ND4LP03901 98 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 MT-ND6P03923 174 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 APELAP0DMC3 54 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 COX4I1P13073 169 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 DEFB131AP59861 70 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 KRTAP10-8P60410 259 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 ROMO1P60602 79 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 GNG11P61952 73 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 SELENOWP63302 87 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 OR51A4Q8NGJ6 313 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 OR5H6Q8NGV6 325 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 BRK1Q8WUW1 75 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 PP6455Q8WZ26 134 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 C14orf132Q9NPU4 83 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 NIT2Q9NQR4 276 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 CCDC167Q9P0B6 97 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 LY96Q9Y6Y9 160 aa2.51□□□□□ -2.01
SND1-216ENST00000492840 RPL37AP61513 92 aaKnown RBP2.5□□□□□ -2.01
SND1-216ENST00000492840 HIST1H1AQ02539 215 aaPredicted RBP2.5□□□□□ -2.01
SND1-216ENST00000492840 TMEM244Q5VVB8 128 aa2.5□□□□□ -2.01
SND1-216ENST00000492840 OR2T35Q8NGX2 323 aa2.5□□□□□ -2.01
SND1-216ENST00000492840 DIRC1Q969H9 104 aa2.5□□□□□ -2.01
SND1-216ENST00000492840 PRELID3AQ96N28 172 aa2.5□□□□□ -2.01
SND1-216ENST00000492840 PFDN5Q99471 154 aa2.5□□□□□ -2.01
SND1-216ENST00000492840 IGKV3-7A0A075B6H7 116 aa2.49□□□□□ -2.01
SND1-216ENST00000492840 TRBV7-1A0A0A6YYK4 115 aa2.49□□□□□ -2.01
SND1-216ENST00000492840 TRAV2A0A0B4J234 112 aa2.49□□□□□ -2.01
SND1-216ENST00000492840 FOXA3P55318 350 aaPredicted RBP2.49□□□□□ -2.01
SND1-216ENST00000492840 Q1T7F1 81 aa2.49□□□□□ -2.01
SND1-216ENST00000492840 RPL39P5Q59GN2 51 aa2.49□□□□□ -2.01
SND1-216ENST00000492840 TTC9CQ8N5M4 171 aa2.49□□□□□ -2.01
SND1-216ENST00000492840 TSC22D3Q99576 134 aa2.49□□□□□ -2.01
SND1-216ENST00000492840 CST9LQ9H4G1 147 aa2.49□□□□□ -2.01
SND1-216ENST00000492840 R4GMQ9 66 aa2.49□□□□□ -2.01
SND1-216ENST00000492840 EFCAB10A6NFE3 127 aa2.48□□□□□ -2.01
SND1-216ENST00000492840 KRTAP9-6A8MVA2 160 aa2.48□□□□□ -2.01
SND1-216ENST00000492840 NDUFA4O00483 81 aa2.48□□□□□ -2.01
SND1-216ENST00000492840 YPEL1O60688 119 aa2.48□□□□□ -2.01
SND1-216ENST00000492840 HIST1H1BP16401 226 aaKnown RBP2.48□□□□□ -2.01
SND1-216ENST00000492840 RAB5CP51148 216 aa2.48□□□□□ -2.01
SND1-216ENST00000492840 SMIM11AP58511 58 aa2.48□□□□□ -2.01
SND1-216ENST00000492840 ELOBQ15370 118 aa2.48□□□□□ -2.01
SND1-216ENST00000492840 OR4B1Q8NGF8 309 aa2.48□□□□□ -2.01
SND1-216ENST00000492840 TXNDC17Q9BRA2 123 aa2.48□□□□□ -2.01
SND1-216ENST00000492840 RHPN1-AS1Q9BWJ2 59 aa2.48□□□□□ -2.01
SND1-216ENST00000492840 DPH3P1Q9H4G8 78 aa2.48□□□□□ -2.01
SND1-216ENST00000492840 CMC2Q9NRP2 79 aa2.48□□□□□ -2.01
SND1-216ENST00000492840 LPAP08519 4548 aa2.47□□□□□ -2.01
SND1-216ENST00000492840 IGKV2D-26A0A0A0MRZ7 120 aa2.47□□□□□ -2.01
SND1-216ENST00000492840 LOC107986453A0A1B0GWG9 222 aa2.47□□□□□ -2.01
SND1-216ENST00000492840 C17orf112F2Z3M2 114 aa2.47□□□□□ -2.01
SND1-216ENST00000492840 IGKV4-1P06312 121 aa2.47□□□□□ -2.01
SND1-216ENST00000492840 EVI2AP22794 236 aa2.47□□□□□ -2.01
SND1-216ENST00000492840 PIGYQ3MUY2 71 aa2.47□□□□□ -2.01
SND1-216ENST00000492840 TMEM14EPQ6UXP3 125 aa2.47□□□□□ -2.01
SND1-216ENST00000492840 Q8N814 137 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms