RNA–Protein interactions for RNA: ENST00000490308.1

EPB41-212, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-212ENST00000490308 CHD3Q12873 2000 aaKnown RBP1.44□□□□□ -2.18
EPB41-212ENST00000490308 LOC110117498A0A087WWA1 95 aa1.44□□□□□ -2.18
EPB41-212ENST00000490308 SYS1-DBNDD2H3BUS1 97 aa1.44□□□□□ -2.18
EPB41-212ENST00000490308 J3QRE1 110 aa1.44□□□□□ -2.18
EPB41-212ENST00000490308 IGKV4-1P06312 121 aa1.44□□□□□ -2.18
EPB41-212ENST00000490308 HMGA1P17096 107 aaKnown RBP1.44□□□□□ -2.18
EPB41-212ENST00000490308 EDDM3BP56851 147 aa1.44□□□□□ -2.18
EPB41-212ENST00000490308 SNRPGP62308 76 aaKnown RBP1.44□□□□□ -2.18
EPB41-212ENST00000490308 PMCHL1Q16048 86 aa1.44□□□□□ -2.18
EPB41-212ENST00000490308 TMEM170BQ5T4T1 132 aa1.44□□□□□ -2.18
EPB41-212ENST00000490308 LCE1EQ5T753 118 aa1.44□□□□□ -2.18
EPB41-212ENST00000490308 LCE1FQ5T754 118 aa1.44□□□□□ -2.18
EPB41-212ENST00000490308 GDF5OSQ5U4N7 250 aa1.44□□□□□ -2.18
EPB41-212ENST00000490308 CYSTM1Q9H1C7 97 aa1.44□□□□□ -2.18
EPB41-212ENST00000490308 WFDC10AQ9H1F0 79 aa1.44□□□□□ -2.18
EPB41-212ENST00000490308 R4GMQ9 66 aa1.44□□□□□ -2.18
EPB41-212ENST00000490308 MYO7BQ6PIF6 2116 aa1.43□□□□□ -2.18
EPB41-212ENST00000490308 IGKV3-7A0A075B6H7 116 aa1.43□□□□□ -2.18
EPB41-212ENST00000490308 HMGN4O00479 90 aa1.43□□□□□ -2.18
EPB41-212ENST00000490308 PIN1P1O15428 100 aa1.43□□□□□ -2.18
EPB41-212ENST00000490308 NMBP08949 121 aa1.43□□□□□ -2.18
EPB41-212ENST00000490308 UBE2D3P61077 147 aa1.43□□□□□ -2.18
EPB41-212ENST00000490308 UBE2D2P62837 147 aa1.43□□□□□ -2.18
EPB41-212ENST00000490308 HMGN3Q15651 99 aa1.43□□□□□ -2.18
EPB41-212ENST00000490308 ZNF56Q15929 161 aa1.43□□□□□ -2.18
EPB41-212ENST00000490308 FAM213BQ8TBF2 198 aa1.43□□□□□ -2.18
EPB41-212ENST00000490308 TTTY10Q9BZA0 68 aa1.43□□□□□ -2.18
EPB41-212ENST00000490308 ST20Q9HBF5 79 aa1.43□□□□□ -2.18
EPB41-212ENST00000490308 NXT2Q9NPJ8 142 aaKnown RBP1.43□□□□□ -2.18
EPB41-212ENST00000490308 HEATR1Q9H583 2144 aaKnown RBP1.43□□□□□ -2.18
EPB41-212ENST00000490308 SHANK1Q9Y566 2161 aa1.42□□□□□ -2.18
EPB41-212ENST00000490308 TNRC6AQ8NDV7 1962 aaKnown RBP1.42□□□□□ -2.18
EPB41-212ENST00000490308 IGKV2-40A0A087WW87 121 aaPredicted RBP1.42□□□□□ -2.18
EPB41-212ENST00000490308 TMEM14DPA8MWL7 114 aa1.42□□□□□ -2.18
EPB41-212ENST00000490308 IGKV2D-40P01614 121 aaPredicted RBP1.42□□□□□ -2.18
EPB41-212ENST00000490308 IGLV3-1P01715 115 aa1.42□□□□□ -2.18
EPB41-212ENST00000490308 APOC3P02656 99 aa1.42□□□□□ -2.18
EPB41-212ENST00000490308 STATHP02808 62 aa1.42□□□□□ -2.18
EPB41-212ENST00000490308 SAA2P0DJI9 122 aaPredicted RBP1.42□□□□□ -2.18
EPB41-212ENST00000490308 CCL3L1P16619 93 aa1.42□□□□□ -2.18
EPB41-212ENST00000490308 SPINT3P49223 89 aa1.42□□□□□ -2.18
EPB41-212ENST00000490308 KLKP1Q107X0 134 aa1.42□□□□□ -2.18
EPB41-212ENST00000490308 VMO1Q7Z5L0 202 aa1.42□□□□□ -2.18
EPB41-212ENST00000490308 Q8N6K4 173 aa1.42□□□□□ -2.18
EPB41-212ENST00000490308 COX7B2Q8TF08 81 aa1.42□□□□□ -2.18
EPB41-212ENST00000490308 SMCO4Q9NRQ5 59 aa1.42□□□□□ -2.18
EPB41-212ENST00000490308 V9GYV3 84 aa1.42□□□□□ -2.18
EPB41-212ENST00000490308 NCOA6Q14686 2063 aaPredicted RBP1.42□□□□□ -2.18
EPB41-212ENST00000490308 ESPL1Q14674 2120 aa1.42□□□□□ -2.18
EPB41-212ENST00000490308 PCNTO95613 3336 aa1.41□□□□□ -2.18
EPB41-212ENST00000490308 IGLC7A0M8Q6 106 aa1.41□□□□□ -2.18
EPB41-212ENST00000490308 CPSF4LA6NMK7 179 aaKnown RBP1.41□□□□□ -2.18
EPB41-212ENST00000490308 CHKB-CPT1BH3BT56 60 aa1.41□□□□□ -2.18
EPB41-212ENST00000490308 PDCD5O14737 125 aa1.41□□□□□ -2.18
EPB41-212ENST00000490308 PRB4P10163 310 aaPredicted RBP1.41□□□□□ -2.18
EPB41-212ENST00000490308 RPL37AP61513 92 aaKnown RBP1.41□□□□□ -2.18
EPB41-212ENST00000490308 PP632Q6XCG6 107 aa1.41□□□□□ -2.18
EPB41-212ENST00000490308 KRTAP5-2Q701N4 177 aa1.41□□□□□ -2.18
EPB41-212ENST00000490308 ZGRF1Q86YA3 2104 aa1.41□□□□□ -2.18
EPB41-212ENST00000490308 C20orf197Q8N268 126 aa1.41□□□□□ -2.18
EPB41-212ENST00000490308 Q9Y3F1 56 aa1.41□□□□□ -2.18
EPB41-212ENST00000490308 SPCS1Q9Y6A9 102 aa1.41□□□□□ -2.18
EPB41-212ENST00000490308 PRRC2BQ5JSZ5 2229 aaKnown RBP1.4□□□□□ -2.18
EPB41-212ENST00000490308 TRBV25-1A0A075B6N4 114 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 TRBV6-7A0A0A0MS04 114 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 IGKV3D-7A0A0C4DH55 119 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 IGKV3OR2-268A0A0C4DH90 116 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 F2Z2F3 143 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 PPP1R17O96001 155 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 HMGN2P05204 90 aaKnown RBP1.4□□□□□ -2.19
EPB41-212ENST00000490308 SPAG11BQ08648 103 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 LINC01590Q5TEZ4 76 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 SPAG11AQ6PDA7 123 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 ALKAL2Q6UX46 152 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 SMIM4Q8WVI0 70 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 COX14Q96I36 57 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 C20orf78Q9BR46 151 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 LINC00474Q9P2X8 69 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 GOLGA4Q13439 2230 aaKnown RBP1.4□□□□□ -2.19
EPB41-212ENST00000490308 UNC13CQ8NB66 2214 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 FN1P02751 2386 aaKnown RBP1.4□□□□□ -2.19
EPB41-212ENST00000490308 ARFGEF3Q5TH69 2177 aa1.4□□□□□ -2.19
EPB41-212ENST00000490308 MYO7AQ13402 2215 aa1.39□□□□□ -2.19
EPB41-212ENST00000490308 TRAV1-2A0A0B4J238 106 aa1.39□□□□□ -2.19
EPB41-212ENST00000490308 TRAV22A0A0B4J277 110 aa1.39□□□□□ -2.19
EPB41-212ENST00000490308 ZNF815PA8K554 130 aa1.39□□□□□ -2.19
EPB41-212ENST00000490308 H7BZZ5 65 aa1.39□□□□□ -2.19
EPB41-212ENST00000490308 RPS27P42677 84 aaKnown RBP1.39□□□□□ -2.19
EPB41-212ENST00000490308 DEFB103AP81534 67 aa1.39□□□□□ -2.19
EPB41-212ENST00000490308 COX17Q14061 63 aa1.39□□□□□ -2.19
EPB41-212ENST00000490308 PSMG4Q5JS54 123 aa1.39□□□□□ -2.19
EPB41-212ENST00000490308 UNQ6190/PRO20217Q6UXQ8 127 aa1.39□□□□□ -2.19
EPB41-212ENST00000490308 Q6ZQY7 126 aa1.39□□□□□ -2.19
EPB41-212ENST00000490308 LINC00643Q86TS7 51 aa1.39□□□□□ -2.19
EPB41-212ENST00000490308 TOMM5Q8N4H5 51 aa1.39□□□□□ -2.19
EPB41-212ENST00000490308 ZNF625Q96I27 306 aaPredicted RBP1.39□□□□□ -2.19
EPB41-212ENST00000490308 LINC01600Q96MT4 127 aa1.39□□□□□ -2.19
EPB41-212ENST00000490308 CMC2Q9NRP2 79 aa1.39□□□□□ -2.19
EPB41-212ENST00000490308 CDC42SE2Q9NRR3 84 aa1.39□□□□□ -2.19
EPB41-212ENST00000490308 NDUFA4L2Q9NRX3 87 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms