RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 ATP5LO75964 103 aa11.37□□□□□ -0.59
ERCC3-207ENST00000490062 SEC11AP67812 179 aa11.37□□□□□ -0.59
ERCC3-207ENST00000490062 LINC01561Q8N1V8 128 aa11.37□□□□□ -0.59
ERCC3-207ENST00000490062 HIST1H2BKO60814 126 aa11.36□□□□□ -0.59
ERCC3-207ENST00000490062 HIST1H2BJP06899 126 aa11.36□□□□□ -0.59
ERCC3-207ENST00000490062 HIST1H2BOP23527 126 aa11.36□□□□□ -0.59
ERCC3-207ENST00000490062 HIST1H2BBP33778 126 aa11.36□□□□□ -0.59
ERCC3-207ENST00000490062 HIST1H2BDP58876 126 aa11.36□□□□□ -0.59
ERCC3-207ENST00000490062 HIST1H2BCP62807 126 aa11.36□□□□□ -0.59
ERCC3-207ENST00000490062 HIST2H2BEQ16778 126 aa11.36□□□□□ -0.59
ERCC3-207ENST00000490062 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.36□□□□□ -0.59
ERCC3-207ENST00000490062 HIST1H2BHQ93079 126 aa11.36□□□□□ -0.59
ERCC3-207ENST00000490062 HIST1H2BNQ99877 126 aa11.36□□□□□ -0.59
ERCC3-207ENST00000490062 HIST1H2BMQ99879 126 aa11.36□□□□□ -0.59
ERCC3-207ENST00000490062 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.35□□□□□ -0.59
ERCC3-207ENST00000490062 A0A087WZ39 114 aa11.35□□□□□ -0.59
ERCC3-207ENST00000490062 HSBP1O75506 76 aa11.35□□□□□ -0.59
ERCC3-207ENST00000490062 SERF1AO75920 110 aa11.35□□□□□ -0.59
ERCC3-207ENST00000490062 GCSHP23434 173 aa11.35□□□□□ -0.59
ERCC3-207ENST00000490062 PMVKQ15126 192 aa11.35□□□□□ -0.59
ERCC3-207ENST00000490062 PMCHL1Q16048 86 aa11.35□□□□□ -0.59
ERCC3-207ENST00000490062 ZC2HC1BQ5TFG8 222 aa11.35□□□□□ -0.59
ERCC3-207ENST00000490062 CST9LQ9H4G1 147 aa11.35□□□□□ -0.59
ERCC3-207ENST00000490062 hDV102S1A0JD36 115 aa11.33□□□□□ -0.6
ERCC3-207ENST00000490062 APOMO95445 188 aa11.33□□□□□ -0.6
ERCC3-207ENST00000490062 HERVK_113P63121 156 aa11.33□□□□□ -0.6
ERCC3-207ENST00000490062 COX6A2Q02221 97 aa11.33□□□□□ -0.6
ERCC3-207ENST00000490062 C9orf163Q8N9P6 203 aa11.33□□□□□ -0.6
ERCC3-207ENST00000490062 DNAH8Q96JB1 4490 aa11.32□□□□□ -0.6
ERCC3-207ENST00000490062 IGLV5-45A0A087WSX0 123 aa11.32□□□□□ -0.6
ERCC3-207ENST00000490062 TINCRA0A1B0GVN0 87 aa11.32□□□□□ -0.6
ERCC3-207ENST00000490062 SLPIP03973 132 aa11.32□□□□□ -0.6
ERCC3-207ENST00000490062 MALP21145 153 aa11.32□□□□□ -0.6
ERCC3-207ENST00000490062 FUSP35637 526 aaKnown RBP eCLIP11.32□□□□□ -0.6
ERCC3-207ENST00000490062 C5orf38Q86SI9 138 aa11.32□□□□□ -0.6
ERCC3-207ENST00000490062 OR10D4PQ8NGN7 298 aa11.32□□□□□ -0.6
ERCC3-207ENST00000490062 KIAA1109Q2LD37 5005 aa11.31□□□□□ -0.6
ERCC3-207ENST00000490062 RYR1P21817 5038 aa11.31□□□□□ -0.6
ERCC3-207ENST00000490062 IGHV3-64A0A075B6Q5 118 aa11.31□□□□□ -0.6
ERCC3-207ENST00000490062 KRTAP10-1P60331 282 aa11.31□□□□□ -0.6
ERCC3-207ENST00000490062 COA6Q5JTJ3 125 aaKnown RBP11.31□□□□□ -0.6
ERCC3-207ENST00000490062 APOBP04114 4563 aaKnown RBP11.31□□□□□ -0.6
ERCC3-207ENST00000490062 F8WDY8 70 aa11.3□□□□□ -0.6
ERCC3-207ENST00000490062 NUPR1O60356 82 aa11.3□□□□□ -0.6
ERCC3-207ENST00000490062 CDK2AP2O75956 126 aa11.3□□□□□ -0.6
ERCC3-207ENST00000490062 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
ERCC3-207ENST00000490062 TRAV12-1A0A0B4J245 112 aa11.29□□□□□ -0.6
ERCC3-207ENST00000490062 A0A0J9YXV3 536 aa11.29□□□□□ -0.6
ERCC3-207ENST00000490062 HIGD2BQ4VC39 106 aa11.29□□□□□ -0.6
ERCC3-207ENST00000490062 Q6ZSA8 131 aa11.29□□□□□ -0.6
ERCC3-207ENST00000490062 FAM19A2Q8N3H0 131 aa11.29□□□□□ -0.6
ERCC3-207ENST00000490062 IFI27L1Q96BM0 104 aa11.29□□□□□ -0.6
ERCC3-207ENST00000490062 C2orf48Q96LS8 159 aa11.29□□□□□ -0.6
ERCC3-207ENST00000490062 IGLC3P0DOY3 106 aa11.28□□□□□ -0.6
ERCC3-207ENST00000490062 PACRGQ96M98 296 aaPredicted RBP11.28□□□□□ -0.6
ERCC3-207ENST00000490062 GEMIN7Q9H840 131 aaKnown RBP11.28□□□□□ -0.6
ERCC3-207ENST00000490062 ZNF561-AS1K7EIQ3 104 aa11.27□□□□□ -0.61
ERCC3-207ENST00000490062 CDKN2A-AS1Q9UH64 79 aa11.27□□□□□ -0.61
ERCC3-207ENST00000490062 LEPROTL1O95214 131 aa11.26□□□□□ -0.61
ERCC3-207ENST00000490062 KIAA0087Q14695 138 aa11.26□□□□□ -0.61
ERCC3-207ENST00000490062 IGLV4-69A0A075B6H9 119 aa11.25□□□□□ -0.61
ERCC3-207ENST00000490062 SPAG11BQ08648 103 aa11.25□□□□□ -0.61
ERCC3-207ENST00000490062 SDIM1Q6ZPB5 146 aa11.25□□□□□ -0.61
ERCC3-207ENST00000490062 ORAOV1Q8WV07 137 aa11.25□□□□□ -0.61
ERCC3-207ENST00000490062 HSPB8Q9UJY1 196 aa11.25□□□□□ -0.61
ERCC3-207ENST00000490062 SYCNQ0VAF6 134 aa11.23□□□□□ -0.61
ERCC3-207ENST00000490062 RNF151Q2KHN1 245 aa11.23□□□□□ -0.61
ERCC3-207ENST00000490062 LINC00469Q8N7U9 141 aa11.23□□□□□ -0.61
ERCC3-207ENST00000490062 HERC2O95714 4834 aa11.23□□□□□ -0.61
ERCC3-207ENST00000490062 SMIM1B2RUZ4 78 aa11.22□□□□□ -0.61
ERCC3-207ENST00000490062 LINC01620Q4KN68 170 aa11.22□□□□□ -0.61
ERCC3-207ENST00000490062 Q8IZM0 81 aa11.22□□□□□ -0.61
ERCC3-207ENST00000490062 CARD19Q96LW7 228 aa11.22□□□□□ -0.61
ERCC3-207ENST00000490062 CHAC1Q9BUX1 264 aa11.22□□□□□ -0.61
ERCC3-207ENST00000490062 PKIGQ9Y2B9 76 aa11.22□□□□□ -0.61
ERCC3-207ENST00000490062 F8VRH5 84 aa11.21□□□□□ -0.61
ERCC3-207ENST00000490062 ZNF22P17026 224 aaPredicted RBP11.21□□□□□ -0.61
ERCC3-207ENST00000490062 XGP55808 180 aa11.21□□□□□ -0.61
ERCC3-207ENST00000490062 NDUFA6P56556 154 aa11.21□□□□□ -0.61
ERCC3-207ENST00000490062 CIRBPQ14011 172 aaKnown RBP11.21□□□□□ -0.61
ERCC3-207ENST00000490062 LINC00526Q96FQ7 95 aa11.21□□□□□ -0.61
ERCC3-207ENST00000490062 MRPL35Q9NZE8 188 aaKnown RBP11.21□□□□□ -0.61
ERCC3-207ENST00000490062 FAM30AQ9NZY2 134 aa11.21□□□□□ -0.61
ERCC3-207ENST00000490062 CHTOPQ9Y3Y2 248 aaKnown RBP11.21□□□□□ -0.61
ERCC3-207ENST00000490062 H3BRM9 83 aa11.2□□□□□ -0.62
ERCC3-207ENST00000490062 Q6ZRU5 148 aa11.2□□□□□ -0.62
ERCC3-207ENST00000490062 CAMK2N2Q96S95 79 aa11.2□□□□□ -0.62
ERCC3-207ENST00000490062 HSPG2P98160 4391 aa11.2□□□□□ -0.62
ERCC3-207ENST00000490062 C11orf86A6NJI1 115 aa11.19□□□□□ -0.62
ERCC3-207ENST00000490062 NDUFA1O15239 70 aa11.19□□□□□ -0.62
ERCC3-207ENST00000490062 ODF1Q14990 250 aa11.19□□□□□ -0.62
ERCC3-207ENST00000490062 IGLV5-39A0A0G2JS06 123 aa11.18□□□□□ -0.62
ERCC3-207ENST00000490062 FABP4P15090 132 aa11.17□□□□□ -0.62
ERCC3-207ENST00000490062 CXCL5P42830 114 aa11.17□□□□□ -0.62
ERCC3-207ENST00000490062 TRBV30A0A0K0K1B3 111 aa11.16□□□□□ -0.62
ERCC3-207ENST00000490062 TLX1NBP0CAT3 122 aa11.16□□□□□ -0.62
ERCC3-207ENST00000490062 PRSS2P07478 247 aa11.15□□□□□ -0.62
ERCC3-207ENST00000490062 MAP1LC3CQ9BXW4 147 aa11.15□□□□□ -0.62
ERCC3-207ENST00000490062 C6orf226Q5I0X4 101 aa11.14□□□□□ -0.63
ERCC3-207ENST00000490062 C10orf25Q5T742 122 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms