RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 DNAH9Q9NYC9 4486 aa8.17□□□□□ -1.1
TRIM40-208ENST00000489892 IGLV4-3A0A075B6K6 122 aa8.16□□□□□ -1.1
TRIM40-208ENST00000489892 DEFB131BA0A096LNP1 70 aa8.16□□□□□ -1.1
TRIM40-208ENST00000489892 A0A0J9YY99 117 aa8.16□□□□□ -1.1
TRIM40-208ENST00000489892 TMEM223A0PJW6 202 aa8.16□□□□□ -1.1
TRIM40-208ENST00000489892 J3QQQ9 107 aa8.16□□□□□ -1.1
TRIM40-208ENST00000489892 UBE2L6O14933 153 aa8.16□□□□□ -1.1
TRIM40-208ENST00000489892 TIRAPP58753 221 aa8.16□□□□□ -1.1
TRIM40-208ENST00000489892 AMELXQ99217 191 aa8.16□□□□□ -1.1
TRIM40-208ENST00000489892 VPS25Q9BRG1 176 aa8.16□□□□□ -1.1
TRIM40-208ENST00000489892 TIMM21Q9BVV7 248 aa8.16□□□□□ -1.1
TRIM40-208ENST00000489892 RYR1P21817 5038 aa8.16□□□□□ -1.1
TRIM40-208ENST00000489892 TRBV6-8A0A0A6YYG3 113 aa8.15□□□□□ -1.1
TRIM40-208ENST00000489892 TMEM238C9JI98 176 aa8.15□□□□□ -1.1
TRIM40-208ENST00000489892 NANOS2P60321 138 aaKnown RBP8.15□□□□□ -1.1
TRIM40-208ENST00000489892 C15orf53Q8NAA6 179 aa8.15□□□□□ -1.1
TRIM40-208ENST00000489892 VSIG2Q96IQ7 327 aa8.15□□□□□ -1.1
TRIM40-208ENST00000489892 IGHV3-38A0A0C4DH36 116 aa8.14□□□□□ -1.11
TRIM40-208ENST00000489892 LOC100131303A0A0U1RQF7 123 aa8.14□□□□□ -1.11
TRIM40-208ENST00000489892 K7ERJ3 54 aa8.14□□□□□ -1.11
TRIM40-208ENST00000489892 ZNF22P17026 224 aaPredicted RBP8.14□□□□□ -1.11
TRIM40-208ENST00000489892 MRPS36P82909 103 aaKnown RBP8.14□□□□□ -1.11
TRIM40-208ENST00000489892 DGAT2L7PQ6IED9 249 aa8.14□□□□□ -1.11
TRIM40-208ENST00000489892 Q9UF83 564 aa8.14□□□□□ -1.11
TRIM40-208ENST00000489892 HERC2O95714 4834 aa8.14□□□□□ -1.11
TRIM40-208ENST00000489892 SACSQ9NZJ4 4579 aa8.13□□□□□ -1.11
TRIM40-208ENST00000489892 TRBV20-1A0A075B6N2 111 aa8.13□□□□□ -1.11
TRIM40-208ENST00000489892 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.13□□□□□ -1.11
TRIM40-208ENST00000489892 RPL24P83731 157 aaKnown RBP8.13□□□□□ -1.11
TRIM40-208ENST00000489892 RNF151Q2KHN1 245 aa8.13□□□□□ -1.11
TRIM40-208ENST00000489892 TMEM101Q96IK0 257 aa8.13□□□□□ -1.11
TRIM40-208ENST00000489892 NAA38Q9BRA0 125 aaKnown RBP8.13□□□□□ -1.11
TRIM40-208ENST00000489892 CHCHD7Q9BUK0 85 aa8.13□□□□□ -1.11
TRIM40-208ENST00000489892 CSDC2Q9Y534 153 aaKnown RBP8.13□□□□□ -1.11
TRIM40-208ENST00000489892 TINCRA0A1B0GVN0 87 aa8.12□□□□□ -1.11
TRIM40-208ENST00000489892 CHCHD5Q9BSY4 110 aa8.12□□□□□ -1.11
TRIM40-208ENST00000489892 A0A0B4J2C4 111 aa8.11□□□□□ -1.11
TRIM40-208ENST00000489892 C3orf84H3BNL1 204 aa8.11□□□□□ -1.11
TRIM40-208ENST00000489892 IGHV3-30P01768 117 aa8.11□□□□□ -1.11
TRIM40-208ENST00000489892 IGHV3-30-5P0DP03 117 aa8.11□□□□□ -1.11
TRIM40-208ENST00000489892 LELP1Q5T871 98 aa8.11□□□□□ -1.11
TRIM40-208ENST00000489892 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
TRIM40-208ENST00000489892 DYNC2H1Q8NCM8 4307 aaKnown RBP8.11□□□□□ -1.11
TRIM40-208ENST00000489892 A0A096LPF7 62 aa8.1□□□□□ -1.11
TRIM40-208ENST00000489892 TIMM17BO60830 172 aa8.1□□□□□ -1.11
TRIM40-208ENST00000489892 PCP4P48539 62 aa8.1□□□□□ -1.11
TRIM40-208ENST00000489892 NTM-AS1Q6ZSK4 140 aa8.1□□□□□ -1.11
TRIM40-208ENST00000489892 C10orf126Q8N4M7 172 aa8.1□□□□□ -1.11
TRIM40-208ENST00000489892 UBE2D4Q9Y2X8 147 aa8.1□□□□□ -1.11
TRIM40-208ENST00000489892 DNAH7Q8WXX0 4024 aa8.09□□□□□ -1.11
TRIM40-208ENST00000489892 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.09□□□□□ -1.11
TRIM40-208ENST00000489892 IGHV1-58A0A0C4DH39 117 aa8.09□□□□□ -1.11
TRIM40-208ENST00000489892 IGKV2-29A2NJV5 120 aaPredicted RBP8.09□□□□□ -1.11
TRIM40-208ENST00000489892 TSPEAR-AS2P59090 65 aa8.09□□□□□ -1.11
TRIM40-208ENST00000489892 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.11
TRIM40-208ENST00000489892 SPANXDQ9BXN6 97 aa8.09□□□□□ -1.11
TRIM40-208ENST00000489892 SPANXCQ9NY87 97 aa8.09□□□□□ -1.11
TRIM40-208ENST00000489892 A0A0J9YXV3 536 aa8.08□□□□□ -1.12
TRIM40-208ENST00000489892 A0A1B0GUV1 79 aa8.08□□□□□ -1.12
TRIM40-208ENST00000489892 NUPR2A6NF83 97 aa8.08□□□□□ -1.12
TRIM40-208ENST00000489892 M0QXV9 152 aa8.08□□□□□ -1.12
TRIM40-208ENST00000489892 TSPAN13O95857 204 aa8.08□□□□□ -1.12
TRIM40-208ENST00000489892 DEFB104AQ8WTQ1 72 aa8.08□□□□□ -1.12
TRIM40-208ENST00000489892 COPS9Q8WXC6 57 aa8.08□□□□□ -1.12
TRIM40-208ENST00000489892 PRO1854Q9UHT4 67 aa8.08□□□□□ -1.12
TRIM40-208ENST00000489892 KLK5Q9Y337 293 aaPredicted RBP8.08□□□□□ -1.12
TRIM40-208ENST00000489892 IGLV5-45A0A087WSX0 123 aa8.07□□□□□ -1.12
TRIM40-208ENST00000489892 A0A0J9YXY3 114 aa8.07□□□□□ -1.12
TRIM40-208ENST00000489892 H3BMG7 143 aa8.07□□□□□ -1.12
TRIM40-208ENST00000489892 IGHV3-30-3P0DP02 117 aa8.07□□□□□ -1.12
TRIM40-208ENST00000489892 TENM2Q9NT68 2774 aa8.06□□□□□ -1.12
TRIM40-208ENST00000489892 TMEM262E9PQX1 116 aa8.06□□□□□ -1.12
TRIM40-208ENST00000489892 APOMO95445 188 aa8.06□□□□□ -1.12
TRIM40-208ENST00000489892 IFITM1P13164 125 aa8.06□□□□□ -1.12
TRIM40-208ENST00000489892 HERVK_113P63121 156 aa8.06□□□□□ -1.12
TRIM40-208ENST00000489892 LYPD5Q6UWN5 251 aa8.06□□□□□ -1.12
TRIM40-208ENST00000489892 MUC7Q8TAX7 377 aa8.06□□□□□ -1.12
TRIM40-208ENST00000489892 GEMIN7Q9H840 131 aaKnown RBP8.06□□□□□ -1.12
TRIM40-208ENST00000489892 DNAH1Q9P2D7 4330 aa8.05□□□□□ -1.12
TRIM40-208ENST00000489892 CFC1BP0CG36 223 aa8.05□□□□□ -1.12
TRIM40-208ENST00000489892 CFC1P0CG37 223 aa8.05□□□□□ -1.12
TRIM40-208ENST00000489892 CCL18P55774 89 aa8.05□□□□□ -1.12
TRIM40-208ENST00000489892 GAGE6Q13070 117 aa8.05□□□□□ -1.12
TRIM40-208ENST00000489892 ZFAND6Q6FIF0 208 aa8.05□□□□□ -1.12
TRIM40-208ENST00000489892 PPDPFQ9H3Y8 114 aa8.05□□□□□ -1.12
TRIM40-208ENST00000489892 PRO0461Q9UI25 63 aa8.05□□□□□ -1.12
TRIM40-208ENST00000489892 SCGB1A1P11684 91 aa8.04□□□□□ -1.12
TRIM40-208ENST00000489892 CASC10Q5T4H9 136 aa8.04□□□□□ -1.12
TRIM40-208ENST00000489892 CEMP1Q6PRD7 247 aaPredicted RBP8.04□□□□□ -1.12
TRIM40-208ENST00000489892 OPRPNQ99935 248 aaPredicted RBP8.04□□□□□ -1.12
TRIM40-208ENST00000489892 CDC42SE2Q9NRR3 84 aa8.04□□□□□ -1.12
TRIM40-208ENST00000489892 LOC107984156A0A0G2JMH3 177 aa8.03□□□□□ -1.12
TRIM40-208ENST00000489892 Q6ZUT4 128 aa8.03□□□□□ -1.12
TRIM40-208ENST00000489892 ARL17AQ8IVW1 177 aa8.03□□□□□ -1.12
TRIM40-208ENST00000489892 NDUFA12Q9UI09 145 aa8.03□□□□□ -1.12
TRIM40-208ENST00000489892 ERG28Q9UKR5 140 aa8.03□□□□□ -1.12
TRIM40-208ENST00000489892 A4D1N5 150 aa8.02□□□□□ -1.13
TRIM40-208ENST00000489892 NDUFA1O15239 70 aa8.02□□□□□ -1.13
TRIM40-208ENST00000489892 CIRBPQ14011 172 aaKnown RBP8.02□□□□□ -1.13
TRIM40-208ENST00000489892 MIAQ16674 131 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms