RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 TSPEAR-AS2P59090 65 aa5.99□□□□□ -1.45
VTI1A-207ENST00000489357 ZFAND6Q6FIF0 208 aa5.99□□□□□ -1.45
VTI1A-207ENST00000489357 Q6ZUT4 128 aa5.99□□□□□ -1.45
VTI1A-207ENST00000489357 RAB37Q96AX2 223 aa5.99□□□□□ -1.45
VTI1A-207ENST00000489357 TMEM101Q96IK0 257 aa5.99□□□□□ -1.45
VTI1A-207ENST00000489357 TMEM243Q9BU79 118 aa5.99□□□□□ -1.45
VTI1A-207ENST00000489357 TRBV20-1A0A075B6N2 111 aa5.98□□□□□ -1.45
VTI1A-207ENST00000489357 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.98□□□□□ -1.45
VTI1A-207ENST00000489357 A0A0B4J2C4 111 aa5.98□□□□□ -1.45
VTI1A-207ENST00000489357 TRGV4A0A0C4DH28 118 aa5.98□□□□□ -1.45
VTI1A-207ENST00000489357 IGKV2-29A2NJV5 120 aaPredicted RBP5.98□□□□□ -1.45
VTI1A-207ENST00000489357 K7ERU9 68 aa5.98□□□□□ -1.45
VTI1A-207ENST00000489357 UBE2L6O14933 153 aa5.98□□□□□ -1.45
VTI1A-207ENST00000489357 GAGE7O76087 117 aa5.98□□□□□ -1.45
VTI1A-207ENST00000489357 GAGE12FP0CL80 117 aa5.98□□□□□ -1.45
VTI1A-207ENST00000489357 GAGE12GP0CL81 117 aa5.98□□□□□ -1.45
VTI1A-207ENST00000489357 GAGE12IP0CL82 117 aa5.98□□□□□ -1.45
VTI1A-207ENST00000489357 IFITM1P13164 125 aa5.98□□□□□ -1.45
VTI1A-207ENST00000489357 SFTA2Q6UW10 78 aa5.98□□□□□ -1.45
VTI1A-207ENST00000489357 SPANXDQ9BXN6 97 aa5.98□□□□□ -1.45
VTI1A-207ENST00000489357 CDC42SE2Q9NRR3 84 aa5.98□□□□□ -1.45
VTI1A-207ENST00000489357 SPANXCQ9NY87 97 aa5.98□□□□□ -1.45
VTI1A-207ENST00000489357 IGLV5-39A0A0G2JS06 123 aa5.97□□□□□ -1.45
VTI1A-207ENST00000489357 CIRBPQ14011 172 aaKnown RBP5.97□□□□□ -1.45
VTI1A-207ENST00000489357 FHL2Q14192 279 aa5.97□□□□□ -1.45
VTI1A-207ENST00000489357 NTM-AS1Q6ZSK4 140 aa5.97□□□□□ -1.45
VTI1A-207ENST00000489357 C10orf126Q8N4M7 172 aa5.97□□□□□ -1.45
VTI1A-207ENST00000489357 WFDC10AQ9H1F0 79 aa5.97□□□□□ -1.45
VTI1A-207ENST00000489357 Q9UF83 564 aa5.97□□□□□ -1.45
VTI1A-207ENST00000489357 DNAH9Q9NYC9 4486 aa5.96□□□□□ -1.46
VTI1A-207ENST00000489357 TRBV6-8A0A0A6YYG3 113 aa5.96□□□□□ -1.46
VTI1A-207ENST00000489357 IGHV3-38A0A0C4DH36 116 aa5.96□□□□□ -1.46
VTI1A-207ENST00000489357 TEX48A0A1B0GUV7 120 aa5.96□□□□□ -1.46
VTI1A-207ENST00000489357 GAGE12JA6NER3 117 aa5.96□□□□□ -1.46
VTI1A-207ENST00000489357 K7ERJ3 54 aa5.96□□□□□ -1.46
VTI1A-207ENST00000489357 NDUFA1O15239 70 aa5.96□□□□□ -1.46
VTI1A-207ENST00000489357 HERV-K104P63124 156 aa5.96□□□□□ -1.46
VTI1A-207ENST00000489357 GAGE4Q13068 117 aa5.96□□□□□ -1.46
VTI1A-207ENST00000489357 GAGE5Q13069 117 aa5.96□□□□□ -1.46
VTI1A-207ENST00000489357 GAGE13Q4V321 117 aa5.96□□□□□ -1.46
VTI1A-207ENST00000489357 CEMP1Q6PRD7 247 aaPredicted RBP5.96□□□□□ -1.46
VTI1A-207ENST00000489357 DEFB104AQ8WTQ1 72 aa5.96□□□□□ -1.46
VTI1A-207ENST00000489357 PRO1854Q9UHT4 67 aa5.96□□□□□ -1.46
VTI1A-207ENST00000489357 NDUFA12Q9UI09 145 aa5.96□□□□□ -1.46
VTI1A-207ENST00000489357 CBY1Q9Y3M2 126 aa5.96□□□□□ -1.46
VTI1A-207ENST00000489357 TGP01266 2768 aa5.95□□□□□ -1.46
VTI1A-207ENST00000489357 TRAV26-1A0A087WT03 109 aa5.95□□□□□ -1.46
VTI1A-207ENST00000489357 K7EIL1 84 aa5.95□□□□□ -1.46
VTI1A-207ENST00000489357 MIFP14174 115 aa5.95□□□□□ -1.46
VTI1A-207ENST00000489357 MIAQ16674 131 aa5.95□□□□□ -1.46
VTI1A-207ENST00000489357 OCIAD2Q56VL3 154 aa5.95□□□□□ -1.46
VTI1A-207ENST00000489357 LINC00242Q5T6M2 205 aa5.95□□□□□ -1.46
VTI1A-207ENST00000489357 CDKN2A-AS1Q9UH64 79 aa5.95□□□□□ -1.46
VTI1A-207ENST00000489357 PRO0255Q9UI72 69 aa5.95□□□□□ -1.46
VTI1A-207ENST00000489357 A0A1B0GUV1 79 aa5.94□□□□□ -1.46
VTI1A-207ENST00000489357 CFC1BP0CG36 223 aa5.94□□□□□ -1.46
VTI1A-207ENST00000489357 CFC1P0CG37 223 aa5.94□□□□□ -1.46
VTI1A-207ENST00000489357 SH2D6Q7Z4S9 175 aa5.94□□□□□ -1.46
VTI1A-207ENST00000489357 MRAPQ8TCY5 172 aa5.94□□□□□ -1.46
VTI1A-207ENST00000489357 LITAFQ99732 161 aa5.94□□□□□ -1.46
VTI1A-207ENST00000489357 M0QXV9 152 aa5.93□□□□□ -1.46
VTI1A-207ENST00000489357 TSPAN13O95857 204 aa5.93□□□□□ -1.46
VTI1A-207ENST00000489357 LINC01561Q8N1V8 128 aa5.93□□□□□ -1.46
VTI1A-207ENST00000489357 COL7A1Q02388 2944 aa5.92□□□□□ -1.46
VTI1A-207ENST00000489357 TRAV8-3A0A0A6YYJ7 113 aa5.92□□□□□ -1.46
VTI1A-207ENST00000489357 A4D1N5 150 aa5.92□□□□□ -1.46
VTI1A-207ENST00000489357 A8MZ25 164 aa5.92□□□□□ -1.46
VTI1A-207ENST00000489357 SMIM1B2RUZ4 78 aa5.92□□□□□ -1.46
VTI1A-207ENST00000489357 J3QR89 54 aa5.92□□□□□ -1.46
VTI1A-207ENST00000489357 SPINK8P0C7L1 97 aa5.92□□□□□ -1.46
VTI1A-207ENST00000489357 ATP6V0E2Q8NHE4 81 aa5.92□□□□□ -1.46
VTI1A-207ENST00000489357 KRTAP9-9Q9BYP9 154 aa5.92□□□□□ -1.46
VTI1A-207ENST00000489357 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
VTI1A-207ENST00000489357 IGHV3-64A0A075B6Q5 118 aa5.91□□□□□ -1.46
VTI1A-207ENST00000489357 F5H768 121 aa5.91□□□□□ -1.46
VTI1A-207ENST00000489357 APOMO95445 188 aa5.91□□□□□ -1.46
VTI1A-207ENST00000489357 IGHV3-33P01772 117 aa5.91□□□□□ -1.46
VTI1A-207ENST00000489357 RBX1P62877 108 aa5.91□□□□□ -1.46
VTI1A-207ENST00000489357 RNASE13Q5GAN3 156 aaKnown RBP5.91□□□□□ -1.46
VTI1A-207ENST00000489357 MUSTN1Q8IVN3 82 aa5.91□□□□□ -1.46
VTI1A-207ENST00000489357 NAA38Q9BRA0 125 aaKnown RBP5.91□□□□□ -1.46
VTI1A-207ENST00000489357 ERG28Q9UKR5 140 aa5.91□□□□□ -1.46
VTI1A-207ENST00000489357 TRAV13-1A0A0B4J241 112 aa5.9□□□□□ -1.46
VTI1A-207ENST00000489357 TRBV30A0A0K0K1B3 111 aa5.9□□□□□ -1.46
VTI1A-207ENST00000489357 SPART-AS1P0CW21 52 aa5.9□□□□□ -1.46
VTI1A-207ENST00000489357 DEFB130BP0DP73 79 aa5.9□□□□□ -1.46
VTI1A-207ENST00000489357 DEFB130AP0DP74 79 aa5.9□□□□□ -1.46
VTI1A-207ENST00000489357 ZNF625Q96I27 306 aaPredicted RBP5.9□□□□□ -1.46
VTI1A-207ENST00000489357 LINC01600Q96MT4 127 aa5.9□□□□□ -1.46
VTI1A-207ENST00000489357 CHCHD5Q9BSY4 110 aa5.9□□□□□ -1.46
VTI1A-207ENST00000489357 A0A087WZ39 114 aa5.89□□□□□ -1.47
VTI1A-207ENST00000489357 H3BMG7 143 aa5.89□□□□□ -1.47
VTI1A-207ENST00000489357 ATP5G1P05496 136 aa5.89□□□□□ -1.47
VTI1A-207ENST00000489357 COX6CP09669 75 aa5.89□□□□□ -1.47
VTI1A-207ENST00000489357 NHLRC4P0CG21 123 aaPredicted RBP5.89□□□□□ -1.47
VTI1A-207ENST00000489357 GYPEP15421 78 aa5.89□□□□□ -1.47
VTI1A-207ENST00000489357 COX6A2Q02221 97 aa5.89□□□□□ -1.47
VTI1A-207ENST00000489357 DEFB121Q5J5C9 76 aa5.89□□□□□ -1.47
VTI1A-207ENST00000489357 FAM222AQ5U5X8 452 aa5.89□□□□□ -1.47
VTI1A-207ENST00000489357 Q8NAQ8 132 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms