RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 CHAC1Q9BUX1 264 aa8.27□□□□□ -1.09
HLA-DOB-209ENST00000488325 A0A0J9YXV3 536 aa8.26□□□□□ -1.09
HLA-DOB-209ENST00000488325 TINCRA0A1B0GVN0 87 aa8.26□□□□□ -1.09
HLA-DOB-209ENST00000488325 RBX1P62877 108 aa8.26□□□□□ -1.09
HLA-DOB-209ENST00000488325 GEMIN7Q9H840 131 aaKnown RBP8.26□□□□□ -1.09
HLA-DOB-209ENST00000488325 IGLV4-60A0A075B6I1 120 aa8.25□□□□□ -1.09
HLA-DOB-209ENST00000488325 PCP4L1A6NKN8 68 aa8.25□□□□□ -1.09
HLA-DOB-209ENST00000488325 HERVK_113P63121 156 aa8.25□□□□□ -1.09
HLA-DOB-209ENST00000488325 ANKRD39Q53RE8 183 aa8.25□□□□□ -1.09
HLA-DOB-209ENST00000488325 TMEM170BQ5T4T1 132 aa8.25□□□□□ -1.09
HLA-DOB-209ENST00000488325 FAM19A3Q7Z5A8 133 aa8.25□□□□□ -1.09
HLA-DOB-209ENST00000488325 STPG4Q8N801 248 aa8.25□□□□□ -1.09
HLA-DOB-209ENST00000488325 UQCR10Q9UDW1 63 aa8.25□□□□□ -1.09
HLA-DOB-209ENST00000488325 TRAV13-1A0A0B4J241 112 aa8.24□□□□□ -1.09
HLA-DOB-209ENST00000488325 MPV17L2Q567V2 206 aa8.24□□□□□ -1.09
HLA-DOB-209ENST00000488325 MIEN1Q9BRT3 115 aa8.24□□□□□ -1.09
HLA-DOB-209ENST00000488325 IGLL5B9A064 214 aa8.23□□□□□ -1.09
HLA-DOB-209ENST00000488325 H3BRM9 83 aa8.23□□□□□ -1.09
HLA-DOB-209ENST00000488325 RTL8CO15255 209 aa8.23□□□□□ -1.09
HLA-DOB-209ENST00000488325 CCL25O15444 150 aa8.23□□□□□ -1.09
HLA-DOB-209ENST00000488325 COX8AP10176 69 aa8.23□□□□□ -1.09
HLA-DOB-209ENST00000488325 ZNF22P17026 224 aaPredicted RBP8.23□□□□□ -1.09
HLA-DOB-209ENST00000488325 SLC25A34Q6PIV7 304 aa8.23□□□□□ -1.09
HLA-DOB-209ENST00000488325 Q8N1X5 172 aa8.23□□□□□ -1.09
HLA-DOB-209ENST00000488325 E9PLD3 99 aa8.22□□□□□ -1.09
HLA-DOB-209ENST00000488325 CDK2AP2O75956 126 aa8.22□□□□□ -1.09
HLA-DOB-209ENST00000488325 ANGP03950 147 aaKnown RBP8.22□□□□□ -1.09
HLA-DOB-209ENST00000488325 NMUP48645 174 aa8.22□□□□□ -1.09
HLA-DOB-209ENST00000488325 CCL18P55774 89 aa8.22□□□□□ -1.09
HLA-DOB-209ENST00000488325 SS18Q15532 418 aa8.22□□□□□ -1.09
HLA-DOB-209ENST00000488325 ESRGQ1W209 222 aa8.22□□□□□ -1.09
HLA-DOB-209ENST00000488325 LINC00469Q8N7U9 141 aa8.22□□□□□ -1.09
HLA-DOB-209ENST00000488325 C14orf144Q96I85 54 aa8.22□□□□□ -1.09
HLA-DOB-209ENST00000488325 IGLV5-45A0A087WSX0 123 aa8.21□□□□□ -1.1
HLA-DOB-209ENST00000488325 DDTP30046 118 aa8.21□□□□□ -1.1
HLA-DOB-209ENST00000488325 LINC00242Q5T6M2 205 aa8.21□□□□□ -1.1
HLA-DOB-209ENST00000488325 APOBP04114 4563 aaKnown RBP8.2□□□□□ -1.1
HLA-DOB-209ENST00000488325 IGKV3OR2-268A0A0C4DH90 116 aa8.2□□□□□ -1.1
HLA-DOB-209ENST00000488325 LINC00959A0A1B0GUT2 108 aa8.2□□□□□ -1.1
HLA-DOB-209ENST00000488325 TMEM223A0PJW6 202 aa8.2□□□□□ -1.1
HLA-DOB-209ENST00000488325 DLEU1O43261 78 aa8.2□□□□□ -1.1
HLA-DOB-209ENST00000488325 HNRNPA3P51991 378 aaKnown RBP8.2□□□□□ -1.1
HLA-DOB-209ENST00000488325 PLEKHB2Q96CS7 222 aa8.2□□□□□ -1.1
HLA-DOB-209ENST00000488325 MRPS16Q9Y3D3 137 aaKnown RBP8.2□□□□□ -1.1
HLA-DOB-209ENST00000488325 LEPROTO15243 131 aa8.19□□□□□ -1.1
HLA-DOB-209ENST00000488325 TCTAP57738 103 aa8.19□□□□□ -1.1
HLA-DOB-209ENST00000488325 IGKV2D-26A0A0A0MRZ7 120 aa8.18□□□□□ -1.1
HLA-DOB-209ENST00000488325 CRPP02741 224 aa8.18□□□□□ -1.1
HLA-DOB-209ENST00000488325 REG3AQ06141 175 aa8.18□□□□□ -1.1
HLA-DOB-209ENST00000488325 WFDC10BQ8IUB3 73 aa8.18□□□□□ -1.1
HLA-DOB-209ENST00000488325 BOD1L2Q8IYS8 172 aa8.18□□□□□ -1.1
HLA-DOB-209ENST00000488325 LINC00269Q8N2A0 174 aa8.18□□□□□ -1.1
HLA-DOB-209ENST00000488325 CDKN2A-AS1Q9UH64 79 aa8.18□□□□□ -1.1
HLA-DOB-209ENST00000488325 LRP1BQ9NZR2 4599 aa8.18□□□□□ -1.1
HLA-DOB-209ENST00000488325 IGHV1-58A0A0C4DH39 117 aa8.17□□□□□ -1.1
HLA-DOB-209ENST00000488325 SIVA1O15304 175 aa8.17□□□□□ -1.1
HLA-DOB-209ENST00000488325 IGHV3-30P01768 117 aa8.17□□□□□ -1.1
HLA-DOB-209ENST00000488325 IGHV3-33P01772 117 aa8.17□□□□□ -1.1
HLA-DOB-209ENST00000488325 IGHV3-30-3P0DP02 117 aa8.17□□□□□ -1.1
HLA-DOB-209ENST00000488325 IGHV3-30-5P0DP03 117 aa8.17□□□□□ -1.1
HLA-DOB-209ENST00000488325 LGALS3P17931 250 aaKnown RBP8.17□□□□□ -1.1
HLA-DOB-209ENST00000488325 COX6A2Q02221 97 aa8.17□□□□□ -1.1
HLA-DOB-209ENST00000488325 LINC01556Q5JQF7 62 aa8.17□□□□□ -1.1
HLA-DOB-209ENST00000488325 CLPSL2Q6UWE3 100 aa8.17□□□□□ -1.1
HLA-DOB-209ENST00000488325 KLK12Q9UKR0 248 aa8.17□□□□□ -1.1
HLA-DOB-209ENST00000488325 J3QQQ9 107 aa8.16□□□□□ -1.1
HLA-DOB-209ENST00000488325 SPINK8P0C7L1 97 aa8.16□□□□□ -1.1
HLA-DOB-209ENST00000488325 PCP2Q8IVA1 136 aa8.16□□□□□ -1.1
HLA-DOB-209ENST00000488325 LINC01561Q8N1V8 128 aa8.16□□□□□ -1.1
HLA-DOB-209ENST00000488325 UPK3BQ9BT76 320 aa8.16□□□□□ -1.1
HLA-DOB-209ENST00000488325 PRR34Q9NV39 138 aa8.16□□□□□ -1.1
HLA-DOB-209ENST00000488325 APLNQ9ULZ1 77 aa8.16□□□□□ -1.1
HLA-DOB-209ENST00000488325 SRRM2Q9UQ35 2752 aaKnown RBP8.16□□□□□ -1.1
HLA-DOB-209ENST00000488325 LINC00588Q9Y4M8 146 aa8.16□□□□□ -1.1
HLA-DOB-209ENST00000488325 TRAV8-4A0A0B4J246 113 aa8.15□□□□□ -1.1
HLA-DOB-209ENST00000488325 MYMXA0A1B0GTQ4 84 aa8.15□□□□□ -1.1
HLA-DOB-209ENST00000488325 ZNF815PA8K554 130 aa8.15□□□□□ -1.1
HLA-DOB-209ENST00000488325 DNAH10OSP0CZ25 163 aa8.15□□□□□ -1.1
HLA-DOB-209ENST00000488325 Q8N3U1 123 aa8.15□□□□□ -1.1
HLA-DOB-209ENST00000488325 IGHV3-64A0A075B6Q5 118 aa8.14□□□□□ -1.11
HLA-DOB-209ENST00000488325 IGHV3OR16-9A0A0B4J2B5 98 aa8.14□□□□□ -1.11
HLA-DOB-209ENST00000488325 C16orf90A8MZG2 172 aa8.14□□□□□ -1.11
HLA-DOB-209ENST00000488325 XCL1P47992 114 aa8.14□□□□□ -1.11
HLA-DOB-209ENST00000488325 MIAQ16674 131 aa8.14□□□□□ -1.11
HLA-DOB-209ENST00000488325 CD164L2Q6UWJ8 174 aa8.14□□□□□ -1.11
HLA-DOB-209ENST00000488325 UBE2DNLQ8IWF7 75 aa8.14□□□□□ -1.11
HLA-DOB-209ENST00000488325 CHCHD10Q8WYQ3 142 aaPredicted RBP8.14□□□□□ -1.11
HLA-DOB-209ENST00000488325 UBE2WQ96B02 151 aa8.14□□□□□ -1.11
HLA-DOB-209ENST00000488325 A0A087WZ39 114 aa8.13□□□□□ -1.11
HLA-DOB-209ENST00000488325 TRAV8-3A0A0A6YYJ7 113 aa8.13□□□□□ -1.11
HLA-DOB-209ENST00000488325 IGLV5-39A0A0G2JS06 123 aa8.13□□□□□ -1.11
HLA-DOB-209ENST00000488325 LINC00587B1AMM8 73 aa8.13□□□□□ -1.11
HLA-DOB-209ENST00000488325 SMIM1B2RUZ4 78 aa8.13□□□□□ -1.11
HLA-DOB-209ENST00000488325 M0R2N4 97 aa8.13□□□□□ -1.11
HLA-DOB-209ENST00000488325 C10orf126Q8N4M7 172 aa8.13□□□□□ -1.11
HLA-DOB-209ENST00000488325 HIGD1BQ9P298 99 aa8.13□□□□□ -1.11
HLA-DOB-209ENST00000488325 COX7A2LO14548 114 aa8.12□□□□□ -1.11
HLA-DOB-209ENST00000488325 CTAG1AP78358 180 aa8.12□□□□□ -1.11
HLA-DOB-209ENST00000488325 ENHOQ6UWT2 76 aa8.12□□□□□ -1.11
HLA-DOB-209ENST00000488325 SCGB1D4Q6XE38 83 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms