RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 UQCR11O14957 56 aa2.41□□□□□ -2.02
VPS8-224ENST00000488255 KRTAP13-2Q52LG2 175 aa2.41□□□□□ -2.02
VPS8-224ENST00000488255 ZNF563Q8TA94 476 aa2.41□□□□□ -2.02
VPS8-224ENST00000488255 MINOS1-NBL1R4GNA1 71 aa2.41□□□□□ -2.02
VPS8-224ENST00000488255 TJP1Q07157 1748 aa2.41□□□□□ -2.02
VPS8-224ENST00000488255 PKD1L3Q7Z443 1732 aa2.41□□□□□ -2.02
VPS8-224ENST00000488255 PTPRSQ13332 1948 aa2.4□□□□□ -2.02
VPS8-224ENST00000488255 DLG5Q8TDM6 1919 aa2.4□□□□□ -2.02
VPS8-224ENST00000488255 NINQ8N4C6 2090 aa2.4□□□□□ -2.02
VPS8-224ENST00000488255 FMN2Q9NZ56 1722 aa2.4□□□□□ -2.02
VPS8-224ENST00000488255 IGHV3OR16-8A0A075B7F1 116 aa2.4□□□□□ -2.03
VPS8-224ENST00000488255 TRBV7-4A0A0J9YYF1 115 aa2.4□□□□□ -2.03
VPS8-224ENST00000488255 NUPR2A6NF83 97 aa2.4□□□□□ -2.03
VPS8-224ENST00000488255 PRB4P10163 310 aaPredicted RBP2.4□□□□□ -2.03
VPS8-224ENST00000488255 DEFA4P12838 97 aa2.4□□□□□ -2.03
VPS8-224ENST00000488255 PDE6HQ13956 83 aa2.4□□□□□ -2.03
VPS8-224ENST00000488255 COX17Q14061 63 aa2.4□□□□□ -2.03
VPS8-224ENST00000488255 Q8NAQ8 132 aa2.4□□□□□ -2.03
VPS8-224ENST00000488255 GCC2Q8IWJ2 1684 aa2.4□□□□□ -2.03
VPS8-224ENST00000488255 GREB1Q4ZG55 1949 aa2.4□□□□□ -2.03
VPS8-224ENST00000488255 MYO7AQ13402 2215 aa2.4□□□□□ -2.03
VPS8-224ENST00000488255 ZNF407Q9C0G0 2248 aa2.4□□□□□ -2.03
VPS8-224ENST00000488255 CPAMD8Q8IZJ3 1885 aa2.39□□□□□ -2.03
VPS8-224ENST00000488255 BAZ2BQ9UIF8 2168 aaKnown RBP2.39□□□□□ -2.03
VPS8-224ENST00000488255 A0A1W2PNM2 257 aa2.39□□□□□ -2.03
VPS8-224ENST00000488255 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
VPS8-224ENST00000488255 Q8TAT8 98 aa2.39□□□□□ -2.03
VPS8-224ENST00000488255 LHFPL6Q9Y693 200 aa2.39□□□□□ -2.03
VPS8-224ENST00000488255 FREM3P0C091 2139 aa2.39□□□□□ -2.03
VPS8-224ENST00000488255 COL27A1Q8IZC6 1860 aaPredicted RBP2.39□□□□□ -2.03
VPS8-224ENST00000488255 HEATR5BQ9P2D3 2071 aa2.38□□□□□ -2.03
VPS8-224ENST00000488255 RREB1Q92766 1687 aa2.38□□□□□ -2.03
VPS8-224ENST00000488255 IGKV3D-11A0A0A0MRZ8 115 aa2.38□□□□□ -2.03
VPS8-224ENST00000488255 IGKV4-1P06312 121 aa2.38□□□□□ -2.03
VPS8-224ENST00000488255 CAV3P56539 151 aa2.38□□□□□ -2.03
VPS8-224ENST00000488255 QSER1Q2KHR3 1735 aa2.38□□□□□ -2.03
VPS8-224ENST00000488255 DEFB113Q30KQ7 82 aa2.38□□□□□ -2.03
VPS8-224ENST00000488255 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
VPS8-224ENST00000488255 Q6ZTI0 123 aa2.38□□□□□ -2.03
VPS8-224ENST00000488255 COX7B2Q8TF08 81 aa2.38□□□□□ -2.03
VPS8-224ENST00000488255 LRP5O75197 1615 aa2.38□□□□□ -2.03
VPS8-224ENST00000488255 NHSL1Q5SYE7 1610 aa2.38□□□□□ -2.03
VPS8-224ENST00000488255 COL11A1P12107 1806 aaPredicted RBP2.38□□□□□ -2.03
VPS8-224ENST00000488255 LAMA4Q16363 1823 aa2.38□□□□□ -2.03
VPS8-224ENST00000488255 KIAA1549LQ6ZVL6 1849 aa2.38□□□□□ -2.03
VPS8-224ENST00000488255 GBF1Q92538 1859 aa2.37□□□□□ -2.03
VPS8-224ENST00000488255 SAMD9LQ8IVG5 1584 aa2.37□□□□□ -2.03
VPS8-224ENST00000488255 MYOFQ9NZM1 2061 aa2.37□□□□□ -2.03
VPS8-224ENST00000488255 PI4KAP42356 2102 aa2.37□□□□□ -2.03
VPS8-224ENST00000488255 PRR9Q5T870 116 aa2.37□□□□□ -2.03
VPS8-224ENST00000488255 KRTAP26-1Q6PEX3 210 aa2.37□□□□□ -2.03
VPS8-224ENST00000488255 LINC01558Q9Y6Z2 57 aa2.37□□□□□ -2.03
VPS8-224ENST00000488255 V9GYV3 84 aa2.37□□□□□ -2.03
VPS8-224ENST00000488255 MYO7BQ6PIF6 2116 aa2.36□□□□□ -2.03
VPS8-224ENST00000488255 ARFGEF1Q9Y6D6 1849 aa2.36□□□□□ -2.03
VPS8-224ENST00000488255 KIAA0100Q14667 2235 aaKnown RBP2.36□□□□□ -2.03
VPS8-224ENST00000488255 SPAG17Q6Q759 2223 aa2.36□□□□□ -2.03
VPS8-224ENST00000488255 IL9P15248 144 aa2.36□□□□□ -2.03
VPS8-224ENST00000488255 CNBPP62633 177 aaKnown RBP2.36□□□□□ -2.03
VPS8-224ENST00000488255 NREPQ16612 68 aa2.36□□□□□ -2.03
VPS8-224ENST00000488255 CSAG1Q6PB30 78 aa2.36□□□□□ -2.03
VPS8-224ENST00000488255 LYPD6Q86Y78 171 aa2.36□□□□□ -2.03
VPS8-224ENST00000488255 LINC00208Q96KT6 92 aa2.36□□□□□ -2.03
VPS8-224ENST00000488255 KLK9Q9UKQ9 250 aa2.36□□□□□ -2.03
VPS8-224ENST00000488255 SNURFQ9Y675 71 aa2.36□□□□□ -2.03
VPS8-224ENST00000488255 IQGAP1P46940 1657 aa2.36□□□□□ -2.03
VPS8-224ENST00000488255 TULP4Q9NRJ4 1543 aa2.36□□□□□ -2.03
VPS8-224ENST00000488255 DIDO1Q9BTC0 2240 aaKnown RBP2.36□□□□□ -2.03
VPS8-224ENST00000488255 NRXN3Q9Y4C0 1643 aa2.35□□□□□ -2.03
VPS8-224ENST00000488255 UBR3Q6ZT12 1888 aa2.35□□□□□ -2.03
VPS8-224ENST00000488255 SPTBP11277 2137 aa2.35□□□□□ -2.03
VPS8-224ENST00000488255 H0Y9P7 68 aa2.35□□□□□ -2.03
VPS8-224ENST00000488255 HCRTO43612 131 aa2.35□□□□□ -2.03
VPS8-224ENST00000488255 RPL38P63173 70 aaKnown RBP2.35□□□□□ -2.03
VPS8-224ENST00000488255 TMEM263Q8WUH6 116 aaKnown RBP2.35□□□□□ -2.03
VPS8-224ENST00000488255 TMEM167BQ9NRX6 74 aa2.35□□□□□ -2.03
VPS8-224ENST00000488255 TMEM14CQ9P0S9 112 aa2.35□□□□□ -2.03
VPS8-224ENST00000488255 SLIT1O75093 1534 aa2.35□□□□□ -2.03
VPS8-224ENST00000488255 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
VPS8-224ENST00000488255 ANKRD36A6QL64 1941 aa2.34□□□□□ -2.03
VPS8-224ENST00000488255 COL4A6Q14031 1691 aa2.34□□□□□ -2.03
VPS8-224ENST00000488255 KIAA1549Q9HCM3 1950 aa2.34□□□□□ -2.03
VPS8-224ENST00000488255 PAPPA2Q9BXP8 1791 aa2.34□□□□□ -2.03
VPS8-224ENST00000488255 LTBP2Q14767 1821 aa2.34□□□□□ -2.03
VPS8-224ENST00000488255 IGKV3D-7A0A0C4DH55 119 aa2.34□□□□□ -2.03
VPS8-224ENST00000488255 TRBV6-1A0A0K0K1D8 114 aa2.34□□□□□ -2.03
VPS8-224ENST00000488255 LINC01546A6NGU7 62 aa2.34□□□□□ -2.03
VPS8-224ENST00000488255 H0YGX0 51 aa2.34□□□□□ -2.03
VPS8-224ENST00000488255 CCL3L1P16619 93 aa2.34□□□□□ -2.03
VPS8-224ENST00000488255 KRTAP25-1Q3LHN0 102 aa2.34□□□□□ -2.03
VPS8-224ENST00000488255 ZGRF1Q86YA3 2104 aa2.34□□□□□ -2.03
VPS8-224ENST00000488255 WFDC9Q8NEX5 89 aa2.34□□□□□ -2.03
VPS8-224ENST00000488255 PROK2Q9HC23 129 aa2.34□□□□□ -2.03
VPS8-224ENST00000488255 RICTORQ6R327 1708 aa2.34□□□□□ -2.04
VPS8-224ENST00000488255 WDR90Q96KV7 1748 aa2.34□□□□□ -2.04
VPS8-224ENST00000488255 MPDZO75970 2070 aa2.33□□□□□ -2.04
VPS8-224ENST00000488255 MDC1Q14676 2089 aaKnown RBP2.33□□□□□ -2.04
VPS8-224ENST00000488255 SDK2Q58EX2 2172 aa2.33□□□□□ -2.04
VPS8-224ENST00000488255 MYO16Q9Y6X6 1858 aa2.33□□□□□ -2.04
VPS8-224ENST00000488255 PHRF1Q9P1Y6 1649 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms