RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 HSD52Q0P140 79 aa-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 Q0VG73 95 aa-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 WHAMMP3Q1A5X7 153 aa-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 KRTAP20-2Q3LI61 65 aa-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 SVBPQ8N300 66 aa-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 C12orf57Q99622 126 aa-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 DPH3P1Q9H4G8 78 aa-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 PAIP2BQ9ULR5 123 aaKnown RBP-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 MUC2Q02817 5179 aa-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 CNOT1A5YKK6 2376 aaKnown RBP-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 CHD8Q9HCK8 2581 aa-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 GAPVD1Q14C86 1478 aa-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 LRP2P98164 4655 aa-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 UNC13AQ9UPW8 1703 aa-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 GOLGA4Q13439 2230 aaKnown RBP-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 MYOM3Q5VTT5 1437 aa-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 ATRQ13535 2644 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 KTN1Q86UP2 1357 aaKnown RBP-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 VWFP04275 2813 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 URB1O60287 2271 aaKnown RBP-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 DCHS2Q6V1P9 2916 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 A0A087WVE0 104 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 A0A1B0GU69 56 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 UBE2L5PA0A1B0GUS4 154 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 CRYM-AS1A6NIL9 109 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 F6UZH7 168 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 I3L3M4 83 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 ASIPP42127 132 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 KRTAP6-2Q3LI66 62 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 H1FX-AS1Q4G0G2 97 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 DEFB107AQ8IZN7 70 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 PP6455Q8WZ26 134 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 FAM167A-AS1Q96KT0 104 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 SPRR4Q96PI1 79 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 CDC42SE2Q9NRR3 84 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 SPTA1P02549 2419 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 LRRC37A2A6NM11 1700 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 PRDM2Q13029 1718 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 FLNBO75369 2602 aaKnown RBP-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 PXDNQ92626 1479 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 NAIPQ13075 1403 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 KMT2CQ8NEZ4 4911 aaKnown RBP-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 SPEF2Q9C093 1822 aa-0.31□□□□□ -2.46
R3HDM1-219ENST00000488035 CREBBPQ92793 2442 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 KDM3BQ7LBC6 1761 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 TENM2Q9NT68 2774 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 NWD2Q9ULI1 1742 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 MYO7BQ6PIF6 2116 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 SETXQ7Z333 2677 aaKnown RBP-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 KDM5AP29375 1690 aaKnown RBP-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 MBD5Q9P267 1494 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 K7EP13 123 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 FGF7P21781 194 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 GNGT1P63211 74 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 BTG2P78543 158 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 VAMP8Q9BV40 100 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 PRO1854Q9UHT4 67 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 SETBP1Q9Y6X0 1596 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 PI4KAP42356 2102 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 NBEAL1Q6ZS30 2694 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 MYH8P13535 1937 aa-0.32□□□□□ -2.46
R3HDM1-219ENST00000488035 KIF21AQ7Z4S6 1674 aa-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 WNK3Q9BYP7 1800 aa-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 IQSEC2Q5JU85 1478 aa-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 NLRP1Q9C000 1473 aa-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 TRAV30A0A087WSZ9 112 aa-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 A0A0G2JND7 137 aa-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 A0A1B0GV90 55 aa-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 C7orf77A4D0Y5 90 aa-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 NAP1L6A6NFF2 107 aa-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 COX6CP09669 75 aa-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 DEFB112Q30KQ8 113 aa-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 RPL13AP3Q6NVV1 102 aa-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 C6orf201Q7Z4U5 140 aa-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 C1orf54Q8WWF1 131 aa-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 BICRAQ9NZM4 1560 aa-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.33□□□□□ -2.46
R3HDM1-219ENST00000488035 TSC2P49815 1807 aa-0.34□□□□□ -2.46
R3HDM1-219ENST00000488035 C1orf167Q5SNV9 1468 aa-0.34□□□□□ -2.46
R3HDM1-219ENST00000488035 hADV29S1A0JD25 119 aa-0.34□□□□□ -2.46
R3HDM1-219ENST00000488035 UBE2D3P61077 147 aa-0.34□□□□□ -2.46
R3HDM1-219ENST00000488035 UBE2D2P62837 147 aa-0.34□□□□□ -2.46
R3HDM1-219ENST00000488035 PPP3R1P63098 170 aa-0.34□□□□□ -2.46
R3HDM1-219ENST00000488035 DOCK1Q14185 1865 aa-0.34□□□□□ -2.46
R3HDM1-219ENST00000488035 LELP1Q5T871 98 aa-0.34□□□□□ -2.46
R3HDM1-219ENST00000488035 SCAPERQ9BY12 1400 aa-0.34□□□□□ -2.46
R3HDM1-219ENST00000488035 GNG8Q9UK08 70 aa-0.34□□□□□ -2.46
R3HDM1-219ENST00000488035 RIMS1Q86UR5 1692 aaKnown RBP-0.34□□□□□ -2.46
R3HDM1-219ENST00000488035 HECTD4Q9Y4D8 3996 aa-0.34□□□□□ -2.46
R3HDM1-219ENST00000488035 MAGI1Q96QZ7 1491 aaPredicted RBP-0.35□□□□□ -2.46
R3HDM1-219ENST00000488035 LPAP08519 4548 aa-0.35□□□□□ -2.47
R3HDM1-219ENST00000488035 TMEM262E9PQX1 116 aa-0.35□□□□□ -2.47
R3HDM1-219ENST00000488035 H0YGG7 62 aa-0.35□□□□□ -2.47
R3HDM1-219ENST00000488035 H3BQF6 201 aa-0.35□□□□□ -2.47
R3HDM1-219ENST00000488035 GNGT2O14610 69 aa-0.35□□□□□ -2.47
R3HDM1-219ENST00000488035 HMGN1P05114 100 aa-0.35□□□□□ -2.47
R3HDM1-219ENST00000488035 SAA2P0DJI9 122 aaPredicted RBP-0.35□□□□□ -2.47
R3HDM1-219ENST00000488035 ATP5EP56381 51 aaPredicted RBP-0.35□□□□□ -2.47
R3HDM1-219ENST00000488035 S100A12P80511 92 aa-0.35□□□□□ -2.47
R3HDM1-219ENST00000488035 TMEM203Q969S6 136 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms