RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 C1orf195Q5TG92 126 aa11.04□□□□□ -0.64
HLA-DQB1-209ENST00000487676 BRI3O95415 125 aa11.04□□□□□ -0.64
HLA-DQB1-209ENST00000487676 FUSP35637 526 aaKnown RBP eCLIP11.04□□□□□ -0.64
HLA-DQB1-209ENST00000487676 DIRC1Q969H9 104 aa11.04□□□□□ -0.64
HLA-DQB1-209ENST00000487676 TRBV6-4A0A1B0GX49 114 aa11.03□□□□□ -0.64
HLA-DQB1-209ENST00000487676 GNLYP22749 145 aa11.03□□□□□ -0.64
HLA-DQB1-209ENST00000487676 LINC00337Q8N6G1 96 aa11.03□□□□□ -0.64
HLA-DQB1-209ENST00000487676 IGLV10-54A0A075B6I4 117 aa11.03□□□□□ -0.64
HLA-DQB1-209ENST00000487676 IGHV4-30-2A0A087WSY4 118 aa11.03□□□□□ -0.64
HLA-DQB1-209ENST00000487676 FAM19A1Q7Z5A9 133 aa11.03□□□□□ -0.64
HLA-DQB1-209ENST00000487676 ZNF575Q86XF7 245 aa11.03□□□□□ -0.64
HLA-DQB1-209ENST00000487676 FAM218AQ96MZ4 157 aa11.02□□□□□ -0.64
HLA-DQB1-209ENST00000487676 HILS1P60008 231 aa11.02□□□□□ -0.65
HLA-DQB1-209ENST00000487676 SCXQ7RTU7 201 aa11.02□□□□□ -0.65
HLA-DQB1-209ENST00000487676 MYO9AB2RTY4 2548 aa11.01□□□□□ -0.65
HLA-DQB1-209ENST00000487676 EIF4EBP3O60516 100 aaPredicted RBP11.01□□□□□ -0.65
HLA-DQB1-209ENST00000487676 IGLV5-45A0A087WSX0 123 aa11.01□□□□□ -0.65
HLA-DQB1-209ENST00000487676 SOSTDC1Q6X4U4 206 aa11.01□□□□□ -0.65
HLA-DQB1-209ENST00000487676 NCOR2Q9Y618 2525 aa11□□□□□ -0.65
HLA-DQB1-209ENST00000487676 TRBV10-3A0A0K0K1G6 114 aa11□□□□□ -0.65
HLA-DQB1-209ENST00000487676 HIGD2BQ4VC39 106 aa11□□□□□ -0.65
HLA-DQB1-209ENST00000487676 Q6ZSN1 163 aa11□□□□□ -0.65
HLA-DQB1-209ENST00000487676 Q8N814 137 aa11□□□□□ -0.65
HLA-DQB1-209ENST00000487676 MAPK1IP1LQ8NDC0 245 aa11□□□□□ -0.65
HLA-DQB1-209ENST00000487676 TRBV6-8A0A0A6YYG3 113 aa10.99□□□□□ -0.65
HLA-DQB1-209ENST00000487676 C10orf99Q6UWK7 81 aa10.99□□□□□ -0.65
HLA-DQB1-209ENST00000487676 MIFP14174 115 aa10.99□□□□□ -0.65
HLA-DQB1-209ENST00000487676 LAMA2P24043 3122 aaKnown RBP10.98□□□□□ -0.65
HLA-DQB1-209ENST00000487676 NTM-AS1Q6ZSK4 140 aa10.98□□□□□ -0.65
HLA-DQB1-209ENST00000487676 KLK9Q2XQG4 91 aa10.98□□□□□ -0.65
HLA-DQB1-209ENST00000487676 SPAG11BQ08648 103 aa10.98□□□□□ -0.65
HLA-DQB1-209ENST00000487676 CHD8Q9HCK8 2581 aa10.98□□□□□ -0.65
HLA-DQB1-209ENST00000487676 BPY2O14599 106 aa10.97□□□□□ -0.65
HLA-DQB1-209ENST00000487676 COX7BP24311 80 aa10.97□□□□□ -0.65
HLA-DQB1-209ENST00000487676 CCL24O00175 119 aa10.96□□□□□ -0.66
HLA-DQB1-209ENST00000487676 Q6ZQY7 126 aa10.96□□□□□ -0.66
HLA-DQB1-209ENST00000487676 NKAPP1Q8N9T2 125 aa10.96□□□□□ -0.66
HLA-DQB1-209ENST00000487676 DEFB114Q30KQ6 69 aa10.96□□□□□ -0.66
HLA-DQB1-209ENST00000487676 ABCA2Q9BZC7 2435 aa10.95□□□□□ -0.66
HLA-DQB1-209ENST00000487676 BEAN1Q3B7T3 259 aa10.95□□□□□ -0.66
HLA-DQB1-209ENST00000487676 CHD9Q3L8U1 2897 aa10.94□□□□□ -0.66
HLA-DQB1-209ENST00000487676 C4orf3Q8WVX3 66 aa10.94□□□□□ -0.66
HLA-DQB1-209ENST00000487676 A0A087WZ39 114 aa10.93□□□□□ -0.66
HLA-DQB1-209ENST00000487676 LINC00959A0A1B0GUT2 108 aa10.93□□□□□ -0.66
HLA-DQB1-209ENST00000487676 BCE1O60756 84 aa10.93□□□□□ -0.66
HLA-DQB1-209ENST00000487676 DEFB105AQ8NG35 78 aa10.93□□□□□ -0.66
HLA-DQB1-209ENST00000487676 MUC4Q99102 2169 aa10.93□□□□□ -0.66
HLA-DQB1-209ENST00000487676 FAM19A3Q7Z5A8 133 aa10.93□□□□□ -0.66
HLA-DQB1-209ENST00000487676 Q8IZM0 81 aa10.92□□□□□ -0.66
HLA-DQB1-209ENST00000487676 BRCA2P51587 3418 aa10.92□□□□□ -0.66
HLA-DQB1-209ENST00000487676 Q8N3U1 123 aa10.92□□□□□ -0.66
HLA-DQB1-209ENST00000487676 RMI2Q96E14 147 aa10.92□□□□□ -0.66
HLA-DQB1-209ENST00000487676 IGHV4-28A0A0C4DH34 117 aa10.92□□□□□ -0.66
HLA-DQB1-209ENST00000487676 LINC00269Q8N2A0 174 aa10.92□□□□□ -0.66
HLA-DQB1-209ENST00000487676 MKI67P46013 3256 aaKnown RBP10.91□□□□□ -0.66
HLA-DQB1-209ENST00000487676 PRO0255Q9UI72 69 aa10.9□□□□□ -0.66
HLA-DQB1-209ENST00000487676 COX17Q14061 63 aa10.9□□□□□ -0.66
HLA-DQB1-209ENST00000487676 FHL2Q14192 279 aa10.9□□□□□ -0.66
HLA-DQB1-209ENST00000487676 CHCHD10Q8WYQ3 142 aaPredicted RBP10.9□□□□□ -0.66
HLA-DQB1-209ENST00000487676 HIVEP2P31629 2446 aa10.89□□□□□ -0.67
HLA-DQB1-209ENST00000487676 TRBV7-6A0A0J9YX20 115 aa10.89□□□□□ -0.67
HLA-DQB1-209ENST00000487676 LOC100131303A0A0U1RQF7 123 aa10.89□□□□□ -0.67
HLA-DQB1-209ENST00000487676 MP68P56378 58 aa10.89□□□□□ -0.67
HLA-DQB1-209ENST00000487676 CAMK2N2Q96S95 79 aa10.89□□□□□ -0.67
HLA-DQB1-209ENST00000487676 LINC01561Q8N1V8 128 aa10.89□□□□□ -0.67
HLA-DQB1-209ENST00000487676 Q9UF83 564 aa10.88□□□□□ -0.67
HLA-DQB1-209ENST00000487676 LINC01547P58512 204 aaPredicted RBP10.88□□□□□ -0.67
HLA-DQB1-209ENST00000487676 Q6ZVQ6 151 aa10.88□□□□□ -0.67
HLA-DQB1-209ENST00000487676 WIPF1O43516 503 aa10.87□□□□□ -0.67
HLA-DQB1-209ENST00000487676 C2orf48Q96LS8 159 aa10.87□□□□□ -0.67
HLA-DQB1-209ENST00000487676 REG3AQ06141 175 aa10.86□□□□□ -0.67
HLA-DQB1-209ENST00000487676 PRB2P02812 416 aaPredicted RBP10.86□□□□□ -0.67
HLA-DQB1-209ENST00000487676 PRR3P79522 188 aaKnown RBP10.86□□□□□ -0.67
HLA-DQB1-209ENST00000487676 CD164L2Q6UWJ8 174 aa10.86□□□□□ -0.67
HLA-DQB1-209ENST00000487676 IGLV4-60A0A075B6I1 120 aa10.85□□□□□ -0.67
HLA-DQB1-209ENST00000487676 CDSNQ15517 529 aa10.85□□□□□ -0.67
HLA-DQB1-209ENST00000487676 TMEM254Q8TBM7 123 aa10.85□□□□□ -0.67
HLA-DQB1-209ENST00000487676 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.85□□□□□ -0.67
HLA-DQB1-209ENST00000487676 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB1-209ENST00000487676 NAV2Q8IVL1 2488 aa10.83□□□□□ -0.68
HLA-DQB1-209ENST00000487676 PRO3102Q9H379 93 aa10.83□□□□□ -0.68
HLA-DQB1-209ENST00000487676 COL27A1Q8IZC6 1860 aaPredicted RBP10.83□□□□□ -0.68
HLA-DQB1-209ENST00000487676 IGKV2-28A0A075B6P5 120 aa10.83□□□□□ -0.68
HLA-DQB1-209ENST00000487676 IGKV2D-28P01615 120 aa10.83□□□□□ -0.68
HLA-DQB1-209ENST00000487676 MUC7Q8TAX7 377 aa10.83□□□□□ -0.68
HLA-DQB1-209ENST00000487676 PRYO14603 147 aa10.83□□□□□ -0.68
HLA-DQB1-209ENST00000487676 CXCL6P80162 114 aa10.83□□□□□ -0.68
HLA-DQB1-209ENST00000487676 C11orf72Q8NBR9 251 aa10.83□□□□□ -0.68
HLA-DQB1-209ENST00000487676 KLK12Q9UKR0 248 aa10.82□□□□□ -0.68
HLA-DQB1-209ENST00000487676 HIVEP3Q5T1R4 2406 aa10.81□□□□□ -0.68
HLA-DQB1-209ENST00000487676 LINC00575Q6W349 94 aa10.81□□□□□ -0.68
HLA-DQB1-209ENST00000487676 ZNF843Q8N446 348 aa10.81□□□□□ -0.68
HLA-DQB1-209ENST00000487676 IGHV3OR16-9A0A0B4J2B5 98 aa10.81□□□□□ -0.68
HLA-DQB1-209ENST00000487676 ZFYVE26Q68DK2 2539 aa10.81□□□□□ -0.68
HLA-DQB1-209ENST00000487676 CFAP54Q96N23 3096 aa10.81□□□□□ -0.68
HLA-DQB1-209ENST00000487676 MRPL55Q7Z7F7 128 aaKnown RBP10.81□□□□□ -0.68
HLA-DQB1-209ENST00000487676 C1orf158Q8N1D5 194 aa10.81□□□□□ -0.68
HLA-DQB1-209ENST00000487676 ESM1Q9NQ30 184 aa10.81□□□□□ -0.68
HLA-DQB1-209ENST00000487676 ETDCA0A1B0GVM5 59 aa10.8□□□□□ -0.68
HLA-DQB1-209ENST00000487676 XAGE1AQ9HD64 81 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms