RNA–Protein interactions for RNA: ENST00000487547.1

USP34-216, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 612 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-216ENST00000487547 DEFB4AO15263 64 aa-0.41□□□□□ -2.48
USP34-216ENST00000487547 RBP4P02753 201 aa-0.41□□□□□ -2.48
USP34-216ENST00000487547 SPAG11BQ08648 103 aa-0.41□□□□□ -2.48
USP34-216ENST00000487547 OR8B8Q15620 311 aa-0.41□□□□□ -2.48
USP34-216ENST00000487547 TMEM91Q6ZNR0 172 aa-0.41□□□□□ -2.48
USP34-216ENST00000487547 Q96NJ1 140 aa-0.41□□□□□ -2.48
USP34-216ENST00000487547 BANF2Q9H503 90 aa-0.41□□□□□ -2.48
USP34-216ENST00000487547 OVOS2A0A0G2JMS6 1433 aa-0.41□□□□□ -2.48
USP34-216ENST00000487547 DISP2A7MBM2 1401 aa-0.41□□□□□ -2.48
USP34-216ENST00000487547 PRG4Q92954 1404 aaPredicted RBP-0.41□□□□□ -2.48
USP34-216ENST00000487547 RRBP1Q9P2E9 1410 aaKnown RBP-0.41□□□□□ -2.48
USP34-216ENST00000487547 THOC2Q8NI27 1593 aaKnown RBP-0.41□□□□□ -2.48
USP34-216ENST00000487547 ITSN1Q15811 1721 aa-0.41□□□□□ -2.48
USP34-216ENST00000487547 MAGI1Q96QZ7 1491 aaPredicted RBP-0.41□□□□□ -2.48
USP34-216ENST00000487547 MLH3Q9UHC1 1453 aa-0.41□□□□□ -2.48
USP34-216ENST00000487547 WDR7Q9Y4E6 1490 aa-0.41□□□□□ -2.48
USP34-216ENST00000487547 PAPPA2Q9BXP8 1791 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 MYOM1P52179 1685 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 A0A087WTM6 91 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 TRBV7-1A0A0A6YYK4 115 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 FAM236AA0A1B0GUQ0 79 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 FAM236BA0A1B0GV22 79 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 C9orf92A6NGG3 77 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 H3BNG1 76 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 SSSCA1O60232 199 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 IFNA17P01571 189 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 ACYP2P14621 99 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 SSBP1Q04837 148 aaKnown RBP-0.42□□□□□ -2.48
USP34-216ENST00000487547 FAM74A4Q5TZK3 123 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 SLC48A1Q6P1K1 146 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 NDUFA11Q86Y39 141 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 Q8IZM0 81 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 SKA2Q8WVK7 121 aaPredicted RBP-0.42□□□□□ -2.48
USP34-216ENST00000487547 SMPXQ9UHP9 88 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 DNAJC15Q9Y5T4 150 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 DAPK1P53355 1430 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 CASKIN1Q8WXD9 1431 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 DIP2AQ14689 1571 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 DNMBPQ6XZF7 1577 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 NRKQ7Z2Y5 1582 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 ABCA3Q99758 1704 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 KIF14Q15058 1648 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 DOCK11Q5JSL3 2073 aa-0.42□□□□□ -2.48
USP34-216ENST00000487547 CFAP43Q8NDM7 1665 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 MAGI3Q5TCQ9 1506 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 A0A0G2JMZ2 1700 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 C4AP0C0L4 1744 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 C4BP0C0L5 1744 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 UBR1Q8IWV7 1749 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 TIAM1Q13009 1591 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 ANKRD50Q9ULJ7 1429 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 H0YGG7 62 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 CCL3L1P16619 93 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 WFDC2Q14508 124 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 DEFB135Q30KP9 77 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 TMEM244Q5VVB8 128 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 SPAG11AQ6PDA7 123 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 CLPSL2Q6UWE3 100 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 DEFB124Q8NES8 71 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 ATP6V0E2Q8NHE4 81 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 ERG28Q9UKR5 140 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 GRIN2AQ12879 1464 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 LRRC9Q6ZRR7 1453 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 KIF21AQ7Z4S6 1674 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 MAPKBP1O60336 1514 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 ZFYVE16Q7Z3T8 1539 aa-0.43□□□□□ -2.48
USP34-216ENST00000487547 PARP4Q9UKK3 1724 aaKnown RBP-0.44□□□□□ -2.48
USP34-216ENST00000487547 PLXNC1O60486 1568 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 ABCC5O15440 1437 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 A0A087WVE0 104 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 SPINK4O60575 86 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 HLA-DRB4P13762 266 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 GCHFRP30047 84 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 UBE2D1P51668 147 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 HAMPP81172 84 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 KRTAP19-5Q3LI72 72 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 CLLU1Q5K131 121 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 UBE2DNLQ8IWF7 75 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 C20orf197Q8N268 126 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 COX7B2Q8TF08 81 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 NDUFA12Q9UI09 145 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 S4R3F8 94 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 V9GYV3 84 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 HLA-DRB4X5D2U9 266 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 FYCO1Q9BQS8 1478 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 FER1L6Q2WGJ9 1857 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 CDC42BPAQ5VT25 1732 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 PKD1L3Q7Z443 1732 aa-0.44□□□□□ -2.48
USP34-216ENST00000487547 ANKRD30AQ9BXX3 1397 aa-0.45□□□□□ -2.48
USP34-216ENST00000487547 DIP2CQ9Y2E4 1556 aa-0.45□□□□□ -2.48
USP34-216ENST00000487547 SIPA1L3O60292 1781 aaPredicted RBP-0.45□□□□□ -2.48
USP34-216ENST00000487547 MYH9P35579 1960 aaKnown RBP-0.45□□□□□ -2.48
USP34-216ENST00000487547 TARBP1Q13395 1621 aaKnown RBP-0.45□□□□□ -2.48
USP34-216ENST00000487547 VPS8Q8N3P4 1428 aa-0.45□□□□□ -2.48
USP34-216ENST00000487547 PBRM1Q86U86 1689 aa-0.45□□□□□ -2.48
USP34-216ENST00000487547 MYOM2P54296 1465 aa-0.45□□□□□ -2.48
USP34-216ENST00000487547 NRXN1Q9ULB1 1477 aa-0.45□□□□□ -2.48
USP34-216ENST00000487547 FAM92AA1XBS5 289 aa-0.45□□□□□ -2.48
USP34-216ENST00000487547 TSTD3H0UI37 97 aa-0.45□□□□□ -2.48
USP34-216ENST00000487547 M0R3E3 92 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms