RNA–Protein interactions for RNA: ENST00000487234.1

TMEM50A-204, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 511 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-204ENST00000487234 TET3O43151 1660 aa0.08□□□□□ -2.4
TMEM50A-204ENST00000487234 ZFYVE16Q7Z3T8 1539 aa0.08□□□□□ -2.4
TMEM50A-204ENST00000487234 ABCC5O15440 1437 aa0.08□□□□□ -2.4
TMEM50A-204ENST00000487234 S100A3P33764 101 aa0.08□□□□□ -2.4
TMEM50A-204ENST00000487234 WFDC2Q14508 124 aa0.08□□□□□ -2.4
TMEM50A-204ENST00000487234 CGREF1Q99674 301 aa0.08□□□□□ -2.4
TMEM50A-204ENST00000487234 PRO1854Q9UHT4 67 aa0.08□□□□□ -2.4
TMEM50A-204ENST00000487234 RAPGEF6Q8TEU7 1601 aa0.08□□□□□ -2.4
TMEM50A-204ENST00000487234 KDM5AP29375 1690 aaKnown RBP0.08□□□□□ -2.4
TMEM50A-204ENST00000487234 NHSL1Q5SYE7 1610 aa0.07□□□□□ -2.4
TMEM50A-204ENST00000487234 hADV29S1A0JD25 119 aa0.07□□□□□ -2.4
TMEM50A-204ENST00000487234 GOLGA4Q13439 2230 aaKnown RBP0.07□□□□□ -2.4
TMEM50A-204ENST00000487234 MYO7BQ6PIF6 2116 aa0.07□□□□□ -2.4
TMEM50A-204ENST00000487234 CC2D2AQ9P2K1 1620 aa0.06□□□□□ -2.4
TMEM50A-204ENST00000487234 ADGRL2O95490 1459 aa0.06□□□□□ -2.4
TMEM50A-204ENST00000487234 CRYM-AS1A6NIL9 109 aa0.06□□□□□ -2.4
TMEM50A-204ENST00000487234 CFDP00746 253 aaPredicted RBP0.06□□□□□ -2.4
TMEM50A-204ENST00000487234 COX6CP09669 75 aa0.06□□□□□ -2.4
TMEM50A-204ENST00000487234 C10orf113Q5VZT2 155 aa0.06□□□□□ -2.4
TMEM50A-204ENST00000487234 C12orf57Q99622 126 aa0.06□□□□□ -2.4
TMEM50A-204ENST00000487234 FAIMQ9NVQ4 179 aa0.06□□□□□ -2.4
TMEM50A-204ENST00000487234 ABCA2Q9BZC7 2435 aa0.06□□□□□ -2.4
TMEM50A-204ENST00000487234 USF3Q68DE3 2245 aa0.06□□□□□ -2.4
TMEM50A-204ENST00000487234 SSPOA2VEC9 5147 aa0.06□□□□□ -2.4
TMEM50A-204ENST00000487234 COL7A1Q02388 2944 aa0.06□□□□□ -2.4
TMEM50A-204ENST00000487234 DIP2CQ9Y2E4 1556 aa0.06□□□□□ -2.4
TMEM50A-204ENST00000487234 WNK2Q9Y3S1 2297 aa0.06□□□□□ -2.4
TMEM50A-204ENST00000487234 CACNA1AO00555 2505 aa0.06□□□□□ -2.4
TMEM50A-204ENST00000487234 NCOR1O75376 2440 aa0.05□□□□□ -2.4
TMEM50A-204ENST00000487234 MRC2Q9UBG0 1479 aa0.05□□□□□ -2.4
TMEM50A-204ENST00000487234 CHD6Q8TD26 2715 aa0.05□□□□□ -2.4
TMEM50A-204ENST00000487234 TMEM218A2RU14 115 aa0.05□□□□□ -2.4
TMEM50A-204ENST00000487234 FAM223BA6NKX1 122 aa0.05□□□□□ -2.4
TMEM50A-204ENST00000487234 ATP6V1G2-DDX39BF2Z307 99 aa0.05□□□□□ -2.4
TMEM50A-204ENST00000487234 TRAPPC2P0DI81 140 aa0.05□□□□□ -2.4
TMEM50A-204ENST00000487234 TRAPPC2BP0DI82 140 aa0.05□□□□□ -2.4
TMEM50A-204ENST00000487234 KRTDAPP60985 99 aa0.05□□□□□ -2.4
TMEM50A-204ENST00000487234 Q5VSD8 79 aa0.05□□□□□ -2.4
TMEM50A-204ENST00000487234 TCEAL7Q9BRU2 100 aa0.05□□□□□ -2.4
TMEM50A-204ENST00000487234 ANKRD17O75179 2603 aaKnown RBP0.05□□□□□ -2.4
TMEM50A-204ENST00000487234 COL4A6Q14031 1691 aa0.05□□□□□ -2.4
TMEM50A-204ENST00000487234 BTAF1O14981 1849 aa0.04□□□□□ -2.4
TMEM50A-204ENST00000487234 PIEZO2Q9H5I5 2752 aa0.04□□□□□ -2.4
TMEM50A-204ENST00000487234 TRBV6-1A0A0K0K1D8 114 aa0.04□□□□□ -2.4
TMEM50A-204ENST00000487234 UBA52P62987 128 aaKnown RBP0.04□□□□□ -2.4
TMEM50A-204ENST00000487234 SEC11AP67812 179 aa0.04□□□□□ -2.4
TMEM50A-204ENST00000487234 PAPPAQ13219 1627 aa0.04□□□□□ -2.4
TMEM50A-204ENST00000487234 PKDREJQ9NTG1 2253 aa0.04□□□□□ -2.4
TMEM50A-204ENST00000487234 SPTBN1Q01082 2364 aaKnown RBP0.04□□□□□ -2.4
TMEM50A-204ENST00000487234 GVINP1Q7Z2Y8 2422 aa0.04□□□□□ -2.4
TMEM50A-204ENST00000487234 TULP4Q9NRJ4 1543 aa0.03□□□□□ -2.4
TMEM50A-204ENST00000487234 TRAV30A0A087WSZ9 112 aa0.03□□□□□ -2.4
TMEM50A-204ENST00000487234 SAA2P0DJI9 122 aaPredicted RBP0.03□□□□□ -2.4
TMEM50A-204ENST00000487234 SPRR1AP35321 89 aa0.03□□□□□ -2.4
TMEM50A-204ENST00000487234 PIGYQ3MUY2 71 aa0.03□□□□□ -2.4
TMEM50A-204ENST00000487234 DEFB123Q8N688 67 aa0.03□□□□□ -2.4
TMEM50A-204ENST00000487234 MAGI1Q96QZ7 1491 aaPredicted RBP0.03□□□□□ -2.41
TMEM50A-204ENST00000487234 ARHGEF12Q9NZN5 1544 aa0.03□□□□□ -2.41
TMEM50A-204ENST00000487234 LINC00959A0A1B0GUT2 108 aa0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 A0A1B0GWA3 101 aa0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 RBP2P50120 134 aa0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 DEFB109BQ30KR1 87 aa0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 LCN9Q8WX39 176 aa0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 LINC01600Q96MT4 127 aa0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 TCHHQ07283 1943 aa0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 TOP2BQ02880 1626 aa0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 PTPN13Q12923 2485 aa0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 SCN7AQ01118 1682 aa0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 PPRC1Q5VV67 1664 aaKnown RBP0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 GNGT2O14610 69 aa0.01□□□□□ -2.41
TMEM50A-204ENST00000487234 MT-ATP8P03928 68 aa0.01□□□□□ -2.41
TMEM50A-204ENST00000487234 LINC00846Q9NV44 126 aa0.01□□□□□ -2.41
TMEM50A-204ENST00000487234 VWFP04275 2813 aa0.01□□□□□ -2.41
TMEM50A-204ENST00000487234 POLA1P09884 1462 aaPredicted RBP0.01□□□□□ -2.41
TMEM50A-204ENST00000487234 C1orf167Q5SNV9 1468 aa0.01□□□□□ -2.41
TMEM50A-204ENST00000487234 TOPAZ1Q8N9V7 1692 aa0.01□□□□□ -2.41
TMEM50A-204ENST00000487234 TENM4Q6N022 2769 aa0□□□□□ -2.41
TMEM50A-204ENST00000487234 FXYD6-FXYD2A0A087WZ82 144 aa0□□□□□ -2.41
TMEM50A-204ENST00000487234 CHD1O14646 1710 aa0□□□□□ -2.41
TMEM50A-204ENST00000487234 S100A10P60903 97 aa0□□□□□ -2.41
TMEM50A-204ENST00000487234 DOPEY2Q9Y3R5 2298 aa0□□□□□ -2.41
TMEM50A-204ENST00000487234 PRDM15P57071 1507 aaPredicted RBP-0.01□□□□□ -2.41
TMEM50A-204ENST00000487234 TRBV7-4A0A0J9YYF1 115 aa-0.01□□□□□ -2.41
TMEM50A-204ENST00000487234 MPC2O95563 127 aa-0.01□□□□□ -2.41
TMEM50A-204ENST00000487234 PRO1933Q9H354 126 aa-0.01□□□□□ -2.41
TMEM50A-204ENST00000487234 CACFD1Q9UGQ2 172 aa-0.01□□□□□ -2.41
TMEM50A-204ENST00000487234 ABCA3Q99758 1704 aa-0.01□□□□□ -2.41
TMEM50A-204ENST00000487234 CNTLNQ9NXG0 1405 aa-0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 A0A0G2JND7 137 aa-0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 H7BZZ5 65 aa-0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 NDUFC1O43677 76 aa-0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 COX6B1P14854 86 aa-0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 ACBD7Q8N6N7 88 aa-0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 FDCSPQ8NFU4 85 aa-0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 SPRR2GQ9BYE4 73 aa-0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 PKD1L1Q8TDX9 2849 aa-0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 FLNCQ14315 2725 aa-0.02□□□□□ -2.41
TMEM50A-204ENST00000487234 GAPVD1Q14C86 1478 aa-0.03□□□□□ -2.41
TMEM50A-204ENST00000487234 ANKRD36BQ8N2N9 1353 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms