RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 LINC00477Q96M19 166 aa5.97□□□□□ -1.45
APTX-228ENST00000486724 LINC01587Q99440 93 aa5.97□□□□□ -1.45
APTX-228ENST00000486724 IGHV4-28A0A0C4DH34 117 aa5.96□□□□□ -1.46
APTX-228ENST00000486724 A8MTW9 85 aa5.96□□□□□ -1.46
APTX-228ENST00000486724 F6UB75 175 aa5.96□□□□□ -1.46
APTX-228ENST00000486724 UQCRQO14949 82 aa5.96□□□□□ -1.46
APTX-228ENST00000486724 TNFRSF6BO95407 300 aa5.96□□□□□ -1.46
APTX-228ENST00000486724 PRB4P10163 310 aaPredicted RBP5.96□□□□□ -1.46
APTX-228ENST00000486724 CMC4P56277 68 aaPredicted RBP5.96□□□□□ -1.46
APTX-228ENST00000486724 DEFB131AP59861 70 aa5.96□□□□□ -1.46
APTX-228ENST00000486724 ERCC8Q13216 396 aa5.96□□□□□ -1.46
APTX-228ENST00000486724 ATXN8Q156A1 80 aa5.96□□□□□ -1.46
APTX-228ENST00000486724 TMEM170BQ5T4T1 132 aa5.96□□□□□ -1.46
APTX-228ENST00000486724 ODF3Q96PU9 254 aa5.96□□□□□ -1.46
APTX-228ENST00000486724 KIR2DL4Q99706 377 aa5.96□□□□□ -1.46
APTX-228ENST00000486724 AGPAT4-IT1Q9H0P7 198 aa5.96□□□□□ -1.46
APTX-228ENST00000486724 PPDPFQ9H3Y8 114 aa5.96□□□□□ -1.46
APTX-228ENST00000486724 MRPL35Q9NZE8 188 aaKnown RBP5.96□□□□□ -1.46
APTX-228ENST00000486724 PRO1854Q9UHT4 67 aa5.96□□□□□ -1.46
APTX-228ENST00000486724 LRP1Q07954 4544 aaKnown RBP5.96□□□□□ -1.46
APTX-228ENST00000486724 NBDYA0A0U1RRE5 68 aa5.95□□□□□ -1.46
APTX-228ENST00000486724 H3BT86 120 aa5.95□□□□□ -1.46
APTX-228ENST00000486724 H3BVH4 76 aa5.95□□□□□ -1.46
APTX-228ENST00000486724 GHRHP01286 108 aa5.95□□□□□ -1.46
APTX-228ENST00000486724 SMR3BP02814 79 aaPredicted RBP5.95□□□□□ -1.46
APTX-228ENST00000486724 IGLC6P0CF74 106 aa5.95□□□□□ -1.46
APTX-228ENST00000486724 DEFB1P60022 68 aa5.95□□□□□ -1.46
APTX-228ENST00000486724 ORMDL2Q53FV1 153 aa5.95□□□□□ -1.46
APTX-228ENST00000486724 C3orf22Q8N5N4 141 aa5.95□□□□□ -1.46
APTX-228ENST00000486724 ZNRF2Q8NHG8 242 aa5.95□□□□□ -1.46
APTX-228ENST00000486724 FAM19A4Q96LR4 140 aa5.95□□□□□ -1.46
APTX-228ENST00000486724 C8orf49Q96NF6 230 aa5.95□□□□□ -1.46
APTX-228ENST00000486724 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.94□□□□□ -1.46
APTX-228ENST00000486724 TRBV10-2A0A0K0K1G8 114 aa5.94□□□□□ -1.46
APTX-228ENST00000486724 C9JAW5 83 aa5.94□□□□□ -1.46
APTX-228ENST00000486724 MIFP14174 115 aa5.94□□□□□ -1.46
APTX-228ENST00000486724 SCGB1D4Q6XE38 83 aa5.94□□□□□ -1.46
APTX-228ENST00000486724 APRG1Q8IVJ8 170 aa5.94□□□□□ -1.46
APTX-228ENST00000486724 LINC00526Q96FQ7 95 aa5.94□□□□□ -1.46
APTX-228ENST00000486724 RNF185Q96GF1 192 aa5.94□□□□□ -1.46
APTX-228ENST00000486724 TTTY13Q9BZ97 58 aa5.94□□□□□ -1.46
APTX-228ENST00000486724 A0A0B4J2C4 111 aa5.93□□□□□ -1.46
APTX-228ENST00000486724 KNCNA6PVL3 124 aa5.93□□□□□ -1.46
APTX-228ENST00000486724 ZNF815PA8K554 130 aa5.93□□□□□ -1.46
APTX-228ENST00000486724 H3BMM0 161 aa5.93□□□□□ -1.46
APTX-228ENST00000486724 SH2D1AO60880 128 aa5.93□□□□□ -1.46
APTX-228ENST00000486724 CRIP1P50238 77 aa5.93□□□□□ -1.46
APTX-228ENST00000486724 C9orf153Q5TBE3 101 aa5.93□□□□□ -1.46
APTX-228ENST00000486724 ZFP2Q6ZN57 461 aa5.93□□□□□ -1.46
APTX-228ENST00000486724 ZFAND2AQ8N6M9 145 aa5.93□□□□□ -1.46
APTX-228ENST00000486724 UBE2WQ96B02 151 aa5.93□□□□□ -1.46
APTX-228ENST00000486724 PRADC1Q9BSG0 188 aa5.93□□□□□ -1.46
APTX-228ENST00000486724 FAT3Q8TDW7 4589 aa5.92□□□□□ -1.46
APTX-228ENST00000486724 KLLNB2CW77 178 aa5.92□□□□□ -1.46
APTX-228ENST00000486724 PPP1R17O96001 155 aa5.92□□□□□ -1.46
APTX-228ENST00000486724 CXCL5P42830 114 aa5.92□□□□□ -1.46
APTX-228ENST00000486724 ZNF80P51504 273 aaPredicted RBP5.92□□□□□ -1.46
APTX-228ENST00000486724 PMVKQ15126 192 aa5.92□□□□□ -1.46
APTX-228ENST00000486724 LINC01620Q4KN68 170 aa5.92□□□□□ -1.46
APTX-228ENST00000486724 PRR9Q5T870 116 aa5.92□□□□□ -1.46
APTX-228ENST00000486724 TRPT1Q86TN4 253 aaKnown RBP5.92□□□□□ -1.46
APTX-228ENST00000486724 BAALCQ8WXS3 180 aa5.92□□□□□ -1.46
APTX-228ENST00000486724 CELA1Q9UNI1 258 aa5.92□□□□□ -1.46
APTX-228ENST00000486724 TRBV30A0A0K0K1B3 111 aa5.91□□□□□ -1.46
APTX-228ENST00000486724 IGKV3-20P01619 116 aa5.91□□□□□ -1.46
APTX-228ENST00000486724 ANXA2RQ3ZCQ2 193 aa5.91□□□□□ -1.46
APTX-228ENST00000486724 STHQ8IWL8 128 aa5.91□□□□□ -1.46
APTX-228ENST00000486724 SLC25A29Q8N8R3 303 aa5.91□□□□□ -1.46
APTX-228ENST00000486724 NEXN-AS1Q8NBZ9 246 aa5.91□□□□□ -1.46
APTX-228ENST00000486724 NTN5Q8WTR8 489 aaPredicted RBP5.91□□□□□ -1.46
APTX-228ENST00000486724 TOMM6Q96B49 74 aa5.91□□□□□ -1.46
APTX-228ENST00000486724 TRAV21A0A0B4J279 112 aa5.9□□□□□ -1.46
APTX-228ENST00000486724 A0A0J9YY99 117 aa5.9□□□□□ -1.46
APTX-228ENST00000486724 IGHV3-30P01768 117 aa5.9□□□□□ -1.46
APTX-228ENST00000486724 CFC1BP0CG36 223 aa5.9□□□□□ -1.46
APTX-228ENST00000486724 CFC1P0CG37 223 aa5.9□□□□□ -1.46
APTX-228ENST00000486724 LINC00694P0DN24 101 aa5.9□□□□□ -1.46
APTX-228ENST00000486724 IGHV3-30-5P0DP03 117 aa5.9□□□□□ -1.46
APTX-228ENST00000486724 EMP1P54849 157 aa5.9□□□□□ -1.46
APTX-228ENST00000486724 FXYD7P58549 80 aa5.9□□□□□ -1.46
APTX-228ENST00000486724 SPINK13Q1W4C9 94 aa5.9□□□□□ -1.46
APTX-228ENST00000486724 SCGB3A1Q96QR1 104 aa5.9□□□□□ -1.46
APTX-228ENST00000486724 PKHD1L1Q86WI1 4243 aa5.9□□□□□ -1.47
APTX-228ENST00000486724 A4D1N5 150 aa5.89□□□□□ -1.47
APTX-228ENST00000486724 SMKR1H3BMG3 65 aa5.89□□□□□ -1.47
APTX-228ENST00000486724 IGHV3-33P01772 117 aa5.89□□□□□ -1.47
APTX-228ENST00000486724 COX6CP09669 75 aa5.89□□□□□ -1.47
APTX-228ENST00000486724 CRYGAP11844 174 aa5.89□□□□□ -1.47
APTX-228ENST00000486724 RNASE4P34096 147 aaKnown RBP5.89□□□□□ -1.47
APTX-228ENST00000486724 HERVK_113P63121 156 aa5.89□□□□□ -1.47
APTX-228ENST00000486724 FAM19A5Q7Z5A7 132 aaPredicted RBP5.89□□□□□ -1.47
APTX-228ENST00000486724 LINC00643Q86TS7 51 aa5.89□□□□□ -1.47
APTX-228ENST00000486724 DEFB104AQ8WTQ1 72 aa5.89□□□□□ -1.47
APTX-228ENST00000486724 FAT4Q6V0I7 4981 aa5.88□□□□□ -1.47
APTX-228ENST00000486724 TMSB15BA0A087X1C1 80 aa5.88□□□□□ -1.47
APTX-228ENST00000486724 INSP01308 110 aa5.88□□□□□ -1.47
APTX-228ENST00000486724 COX7CP15954 63 aa5.88□□□□□ -1.47
APTX-228ENST00000486724 TMEM258P61165 79 aa5.88□□□□□ -1.47
APTX-228ENST00000486724 GAGE2AQ6NT46 116 aa5.88□□□□□ -1.47
APTX-228ENST00000486724 Q6ZQT7 251 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms