RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 USH2AO75445 5202 aa3.68□□□□□ -1.82
SMC4-217ENST00000485867 CCDC160A6NGH7 325 aa3.68□□□□□ -1.82
SMC4-217ENST00000485867 TRGC1P0CF51 173 aa3.68□□□□□ -1.82
SMC4-217ENST00000485867 PET100P0DJ07 73 aa3.68□□□□□ -1.82
SMC4-217ENST00000485867 RPL28P46779 137 aaKnown RBP3.68□□□□□ -1.82
SMC4-217ENST00000485867 H2BFSP57053 126 aa3.68□□□□□ -1.82
SMC4-217ENST00000485867 SERF2P84101 59 aa3.68□□□□□ -1.82
SMC4-217ENST00000485867 C5orf38Q86SI9 138 aa3.68□□□□□ -1.82
SMC4-217ENST00000485867 GATD1Q8NB37 220 aa3.68□□□□□ -1.82
SMC4-217ENST00000485867 RPL39LQ96EH5 51 aaKnown RBP3.68□□□□□ -1.82
SMC4-217ENST00000485867 TCEAL7Q9BRU2 100 aa3.68□□□□□ -1.82
SMC4-217ENST00000485867 TPPP3Q9BW30 176 aa3.68□□□□□ -1.82
SMC4-217ENST00000485867 C6orf48Q9UBA6 75 aa3.68□□□□□ -1.82
SMC4-217ENST00000485867 TNFSF18Q9UNG2 199 aa3.68□□□□□ -1.82
SMC4-217ENST00000485867 CTXND1A0A1B0GTU2 59 aa3.67□□□□□ -1.82
SMC4-217ENST00000485867 C1orf196B1AJZ1 125 aa3.67□□□□□ -1.82
SMC4-217ENST00000485867 F8WDY8 70 aa3.67□□□□□ -1.82
SMC4-217ENST00000485867 NDUFA1O15239 70 aa3.67□□□□□ -1.82
SMC4-217ENST00000485867 DEFA1P59665 94 aa3.67□□□□□ -1.82
SMC4-217ENST00000485867 FAM229BQ4G0N7 80 aa3.67□□□□□ -1.82
SMC4-217ENST00000485867 ZC2HC1BQ5TFG8 222 aa3.67□□□□□ -1.82
SMC4-217ENST00000485867 UNQ6190/PRO20217Q6UXQ8 127 aa3.67□□□□□ -1.82
SMC4-217ENST00000485867 MRPL52Q86TS9 123 aaKnown RBP3.67□□□□□ -1.82
SMC4-217ENST00000485867 OR10D4PQ8NGN7 298 aa3.67□□□□□ -1.82
SMC4-217ENST00000485867 STOML3Q8TAV4 291 aa3.67□□□□□ -1.82
SMC4-217ENST00000485867 SDHAF1A6NFY7 115 aa3.66□□□□□ -1.82
SMC4-217ENST00000485867 INMT-MINDY4F8WBC2 141 aa3.66□□□□□ -1.82
SMC4-217ENST00000485867 BCE1O60756 84 aa3.66□□□□□ -1.82
SMC4-217ENST00000485867 CTRLP40313 264 aa3.66□□□□□ -1.82
SMC4-217ENST00000485867 FHITP49789 147 aa3.66□□□□□ -1.82
SMC4-217ENST00000485867 TMEM241Q24JQ0 296 aa3.66□□□□□ -1.82
SMC4-217ENST00000485867 C9orf129Q5T035 196 aaKnown RBP3.66□□□□□ -1.82
SMC4-217ENST00000485867 MZT2BQ6NZ67 158 aa3.66□□□□□ -1.82
SMC4-217ENST00000485867 BAGE2Q86Y30 109 aa3.66□□□□□ -1.82
SMC4-217ENST00000485867 ORAOV1Q8WV07 137 aa3.66□□□□□ -1.82
SMC4-217ENST00000485867 MRAP2Q96G30 205 aa3.66□□□□□ -1.82
SMC4-217ENST00000485867 ALG5Q9Y673 324 aa3.66□□□□□ -1.82
SMC4-217ENST00000485867 FLGP20930 4061 aaPredicted RBP3.65□□□□□ -1.82
SMC4-217ENST00000485867 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.82
SMC4-217ENST00000485867 IGKV2D-26A0A0A0MRZ7 120 aa3.65□□□□□ -1.83
SMC4-217ENST00000485867 TRAV13-1A0A0B4J241 112 aa3.65□□□□□ -1.83
SMC4-217ENST00000485867 S100A9P06702 114 aaKnown RBP3.65□□□□□ -1.83
SMC4-217ENST00000485867 CST9LP1Q5W188 147 aa3.65□□□□□ -1.83
SMC4-217ENST00000485867 MACF1Q9UPN3 7388 aaKnown RBP3.65□□□□□ -1.83
SMC4-217ENST00000485867 FAM240BA0A1B0GVZ2 78 aa3.64□□□□□ -1.83
SMC4-217ENST00000485867 NDUFC2-KCTD14E9PQ53 114 aa3.64□□□□□ -1.83
SMC4-217ENST00000485867 F2Z2F3 143 aa3.64□□□□□ -1.83
SMC4-217ENST00000485867 I3L3M4 83 aa3.64□□□□□ -1.83
SMC4-217ENST00000485867 M0R2T5 61 aa3.64□□□□□ -1.83
SMC4-217ENST00000485867 PMCHP20382 165 aa3.64□□□□□ -1.83
SMC4-217ENST00000485867 RPS20P60866 119 aaKnown RBP3.64□□□□□ -1.83
SMC4-217ENST00000485867 RNASE13Q5GAN3 156 aaKnown RBP3.64□□□□□ -1.83
SMC4-217ENST00000485867 LYZL1Q6UWQ5 148 aa3.64□□□□□ -1.83
SMC4-217ENST00000485867 CCDC32Q9BV29 185 aa3.64□□□□□ -1.83
SMC4-217ENST00000485867 TMEM242Q9NWH2 141 aa3.64□□□□□ -1.83
SMC4-217ENST00000485867 C22orf24Q9Y442 160 aa3.64□□□□□ -1.83
SMC4-217ENST00000485867 MAP1LC3B2A6NCE7 125 aa3.63□□□□□ -1.83
SMC4-217ENST00000485867 NOTCH2NLQ7Z3S9 236 aa3.63□□□□□ -1.83
SMC4-217ENST00000485867 KRTAP13-1Q8IUC0 172 aa3.63□□□□□ -1.83
SMC4-217ENST00000485867 C3orf22Q8N5N4 141 aa3.63□□□□□ -1.83
SMC4-217ENST00000485867 MAP1LC3BQ9GZQ8 125 aa3.63□□□□□ -1.83
SMC4-217ENST00000485867 RNASE7Q9H1E1 156 aaKnown RBP3.63□□□□□ -1.83
SMC4-217ENST00000485867 TRBV6-5A0A0K0K1A5 114 aa3.62□□□□□ -1.83
SMC4-217ENST00000485867 TRBV30A0A0K0K1B3 111 aa3.62□□□□□ -1.83
SMC4-217ENST00000485867 A0A1B0GVG6 124 aa3.62□□□□□ -1.83
SMC4-217ENST00000485867 C7orf77A4D0Y5 90 aa3.62□□□□□ -1.83
SMC4-217ENST00000485867 PAGE4O60829 102 aa3.62□□□□□ -1.83
SMC4-217ENST00000485867 LBHQ53QV2 105 aaPredicted RBP3.62□□□□□ -1.83
SMC4-217ENST00000485867 SPAG11AQ6PDA7 123 aa3.62□□□□□ -1.83
SMC4-217ENST00000485867 Q6ZUT4 128 aa3.62□□□□□ -1.83
SMC4-217ENST00000485867 CYTL1Q9NRR1 136 aa3.62□□□□□ -1.83
SMC4-217ENST00000485867 CSDC2Q9Y534 153 aaKnown RBP3.62□□□□□ -1.83
SMC4-217ENST00000485867 IGHV3OR16-9A0A0B4J2B5 98 aa3.61□□□□□ -1.83
SMC4-217ENST00000485867 IFNA1P01562 189 aa3.61□□□□□ -1.83
SMC4-217ENST00000485867 FOXA3P55318 350 aaPredicted RBP3.61□□□□□ -1.83
SMC4-217ENST00000485867 KIAA0087Q14695 138 aa3.61□□□□□ -1.83
SMC4-217ENST00000485867 PACRGQ96M98 296 aaPredicted RBP3.61□□□□□ -1.83
SMC4-217ENST00000485867 FAM210AQ96ND0 272 aa3.61□□□□□ -1.83
SMC4-217ENST00000485867 CNFNQ9BYD5 112 aa3.61□□□□□ -1.83
SMC4-217ENST00000485867 TP73-AS1Q9UF72 201 aa3.61□□□□□ -1.83
SMC4-217ENST00000485867 UBE2D4Q9Y2X8 147 aa3.61□□□□□ -1.83
SMC4-217ENST00000485867 SYNE2Q8WXH0 6885 aaKnown RBP3.61□□□□□ -1.83
SMC4-217ENST00000485867 XKRY2A2RUG3 117 aa3.6□□□□□ -1.83
SMC4-217ENST00000485867 KRTAP16-1A8MUX0 517 aa3.6□□□□□ -1.83
SMC4-217ENST00000485867 UBE2AP49459 152 aa3.6□□□□□ -1.83
SMC4-217ENST00000485867 AKR1C8PQ5T2L2 129 aa3.6□□□□□ -1.83
SMC4-217ENST00000485867 RPL7L1Q6DKI1 246 aaKnown RBP3.6□□□□□ -1.83
SMC4-217ENST00000485867 TEX261Q6UWH6 196 aa3.6□□□□□ -1.83
SMC4-217ENST00000485867 C2orf82Q6UX34 121 aa3.6□□□□□ -1.83
SMC4-217ENST00000485867 MRPL55Q7Z7F7 128 aaKnown RBP3.6□□□□□ -1.83
SMC4-217ENST00000485867 C9orf62Q8N4C0 152 aa3.6□□□□□ -1.83
SMC4-217ENST00000485867 DAND5Q8N907 189 aa3.6□□□□□ -1.83
SMC4-217ENST00000485867 IGLV8-61A0A075B6I0 122 aa3.59□□□□□ -1.83
SMC4-217ENST00000485867 TRBV27A0A0K0K1C4 114 aa3.59□□□□□ -1.83
SMC4-217ENST00000485867 SMIM1B2RUZ4 78 aa3.59□□□□□ -1.83
SMC4-217ENST00000485867 SSNA1O43805 119 aa3.59□□□□□ -1.83
SMC4-217ENST00000485867 PFDN1O60925 122 aa3.59□□□□□ -1.83
SMC4-217ENST00000485867 RPL35P42766 123 aaKnown RBP3.59□□□□□ -1.83
SMC4-217ENST00000485867 POLR2KP53803 58 aaKnown RBP3.59□□□□□ -1.83
SMC4-217ENST00000485867 CENPWQ5EE01 88 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms