RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 TRAV10A0A0B4J240 114 aa3.6□□□□□ -1.83
CCDC39-205ENST00000485055 A0A0J9YWU9 116 aa3.6□□□□□ -1.83
CCDC39-205ENST00000485055 HBDP02042 147 aa3.6□□□□□ -1.83
CCDC39-205ENST00000485055 TMEM256Q8N2U0 113 aa3.6□□□□□ -1.83
CCDC39-205ENST00000485055 TOMM5Q8N4H5 51 aa3.6□□□□□ -1.83
CCDC39-205ENST00000485055 ZNF431Q8TF32 576 aaPredicted RBP3.6□□□□□ -1.83
CCDC39-205ENST00000485055 DIRC1Q969H9 104 aa3.6□□□□□ -1.83
CCDC39-205ENST00000485055 WFDC10AQ9H1F0 79 aa3.6□□□□□ -1.83
CCDC39-205ENST00000485055 BIRC6Q9NR09 4857 aa3.6□□□□□ -1.83
CCDC39-205ENST00000485055 FRAS1Q86XX4 4008 aa3.6□□□□□ -1.83
CCDC39-205ENST00000485055 A0A0J9YX75 114 aa3.6□□□□□ -1.83
CCDC39-205ENST00000485055 HLA-DQA1P01909 254 aa3.6□□□□□ -1.83
CCDC39-205ENST00000485055 LORP23490 312 aaPredicted RBP3.6□□□□□ -1.83
CCDC39-205ENST00000485055 LYZL2Q7Z4W2 148 aa3.6□□□□□ -1.83
CCDC39-205ENST00000485055 C20orf203Q8NBC4 194 aa3.6□□□□□ -1.83
CCDC39-205ENST00000485055 CHCHD5Q9BSY4 110 aa3.6□□□□□ -1.83
CCDC39-205ENST00000485055 TENM3Q9P273 2699 aa3.6□□□□□ -1.83
CCDC39-205ENST00000485055 IGKV1OR2-108A0A075B7D4 117 aa3.59□□□□□ -1.83
CCDC39-205ENST00000485055 A0A087X002 238 aa3.59□□□□□ -1.83
CCDC39-205ENST00000485055 TSPEAR-AS2P59090 65 aa3.59□□□□□ -1.83
CCDC39-205ENST00000485055 TMEM14CQ9P0S9 112 aa3.59□□□□□ -1.83
CCDC39-205ENST00000485055 A0A1B0GVY2 172 aa3.59□□□□□ -1.84
CCDC39-205ENST00000485055 CEBPZOSA8MTT3 80 aa3.59□□□□□ -1.84
CCDC39-205ENST00000485055 S4R3C0 116 aa3.59□□□□□ -1.84
CCDC39-205ENST00000485055 MUC4Q99102 2169 aa3.59□□□□□ -1.84
CCDC39-205ENST00000485055 FUSP35637 526 aaKnown RBP eCLIP3.58□□□□□ -1.84
CCDC39-205ENST00000485055 DEFB131AP59861 70 aa3.58□□□□□ -1.84
CCDC39-205ENST00000485055 NPC2P61916 151 aa3.58□□□□□ -1.84
CCDC39-205ENST00000485055 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.58□□□□□ -1.84
CCDC39-205ENST00000485055 TMEM183AQ8IXX5 376 aa3.58□□□□□ -1.84
CCDC39-205ENST00000485055 ORMDL3Q8N138 153 aa3.58□□□□□ -1.84
CCDC39-205ENST00000485055 FAM213BQ8TBF2 198 aa3.58□□□□□ -1.84
CCDC39-205ENST00000485055 IGKV3D-20A0A0C4DH25 116 aa3.58□□□□□ -1.84
CCDC39-205ENST00000485055 CIRBPQ14011 172 aaKnown RBP3.58□□□□□ -1.84
CCDC39-205ENST00000485055 Q6ZR54 194 aa3.58□□□□□ -1.84
CCDC39-205ENST00000485055 CYP2G1PQ6ZSU1 146 aa3.58□□□□□ -1.84
CCDC39-205ENST00000485055 SPANXDQ9BXN6 97 aa3.58□□□□□ -1.84
CCDC39-205ENST00000485055 DPH3P1Q9H4G8 78 aa3.58□□□□□ -1.84
CCDC39-205ENST00000485055 A6NED7 52 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 SNRPGP15A8MWD9 76 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 IL4P05112 153 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 PDE6HQ13956 83 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 DEFB135Q30KP9 77 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 TSKUQ8WUA8 353 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 PMCHL2Q9BQD1 86 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 SLC50A1Q9BRV3 221 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 SIX6O95475 246 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 PYDC2Q56P42 97 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 C15orf53Q8NAA6 179 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 FAM24AA6NFZ4 105 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 F8W1H4 67 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 TIMM17BO60830 172 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 COX7CP15954 63 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 ADCYAP1P18509 176 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 LINC01545Q5VT33 79 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 C2orf66Q6UXQ4 117 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 RAB37Q96AX2 223 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 C8orf49Q96NF6 230 aa3.57□□□□□ -1.84
CCDC39-205ENST00000485055 STAB2Q8WWQ8 2551 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 HECTD4Q9Y4D8 3996 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.56□□□□□ -1.84
CCDC39-205ENST00000485055 IGLC2P0DOY2 106 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 MRPL51Q4U2R6 128 aaKnown RBP3.56□□□□□ -1.84
CCDC39-205ENST00000485055 S100A7L2Q5SY68 101 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 PATE2Q6UY27 113 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 ZFP2Q6ZN57 461 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 VGLL1Q99990 258 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 UPK3BQ9BT76 320 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 NMES1Q9C002 83 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 hADV29S1A0JD25 119 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 A8MWL6 223 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 SPART-AS1P0CW21 52 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 RPS10P46783 165 aaKnown RBP3.56□□□□□ -1.84
CCDC39-205ENST00000485055 RNASE13Q5GAN3 156 aaKnown RBP3.56□□□□□ -1.84
CCDC39-205ENST00000485055 POM121L12Q8N7R1 296 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 CLEC2BQ92478 149 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 AQP10Q96PS8 301 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 CAMK2N2Q96S95 79 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 LENEPQ9Y5L5 61 aa3.56□□□□□ -1.84
CCDC39-205ENST00000485055 IGHV3-21A0A0B4J1V1 117 aa3.55□□□□□ -1.84
CCDC39-205ENST00000485055 HYPMO75409 117 aa3.55□□□□□ -1.84
CCDC39-205ENST00000485055 IGLC3P0DOY3 106 aa3.55□□□□□ -1.84
CCDC39-205ENST00000485055 LYPD1Q8N2G4 141 aa3.55□□□□□ -1.84
CCDC39-205ENST00000485055 PSENENQ9NZ42 101 aa3.55□□□□□ -1.84
CCDC39-205ENST00000485055 ATP6V0E2Q8NHE4 81 aa3.55□□□□□ -1.84
CCDC39-205ENST00000485055 SPCS1Q9Y6A9 102 aa3.55□□□□□ -1.84
CCDC39-205ENST00000485055 FAT2Q9NYQ8 4349 aa3.55□□□□□ -1.84
CCDC39-205ENST00000485055 HYDINQ4G0P3 5121 aa3.54□□□□□ -1.84
CCDC39-205ENST00000485055 ZFP92A6NM28 416 aa3.54□□□□□ -1.84
CCDC39-205ENST00000485055 LYRM1O43325 122 aa3.54□□□□□ -1.84
CCDC39-205ENST00000485055 ETDBQ3ZM63 59 aa3.54□□□□□ -1.84
CCDC39-205ENST00000485055 SPINK9Q5DT21 86 aa3.54□□□□□ -1.84
CCDC39-205ENST00000485055 PSMG4Q5JS54 123 aa3.54□□□□□ -1.84
CCDC39-205ENST00000485055 C9orf47Q6ZRZ4 202 aa3.54□□□□□ -1.84
CCDC39-205ENST00000485055 MIR17HGQ75NE6 70 aa3.54□□□□□ -1.84
CCDC39-205ENST00000485055 ZFAND2AQ8N6M9 145 aa3.54□□□□□ -1.84
CCDC39-205ENST00000485055 COPS9Q8WXC6 57 aa3.54□□□□□ -1.84
CCDC39-205ENST00000485055 C19orf71A6NCJ1 209 aa3.54□□□□□ -1.84
CCDC39-205ENST00000485055 A8MWP4 228 aa3.54□□□□□ -1.84
CCDC39-205ENST00000485055 PRB4P10163 310 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms