RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 REG3AQ06141 175 aa6.11□□□□□ -1.43
SHROOM4-204ENST00000483955 PMVKQ15126 192 aa6.11□□□□□ -1.43
SHROOM4-204ENST00000483955 MIAQ16674 131 aa6.11□□□□□ -1.43
SHROOM4-204ENST00000483955 LINC00269Q8N2A0 174 aa6.11□□□□□ -1.43
SHROOM4-204ENST00000483955 AMELXQ99217 191 aa6.11□□□□□ -1.43
SHROOM4-204ENST00000483955 HIST1H2BLQ99880 126 aa6.11□□□□□ -1.43
SHROOM4-204ENST00000483955 KRTAP4-2Q9BYR5 136 aa6.11□□□□□ -1.43
SHROOM4-204ENST00000483955 PRR34Q9NV39 138 aa6.11□□□□□ -1.43
SHROOM4-204ENST00000483955 PLECQ15149 4684 aaKnown RBP6.1□□□□□ -1.43
SHROOM4-204ENST00000483955 TRAV12-1A0A0B4J245 112 aa6.1□□□□□ -1.43
SHROOM4-204ENST00000483955 TRAV8-4A0A0B4J246 113 aa6.1□□□□□ -1.43
SHROOM4-204ENST00000483955 NBDYA0A0U1RRE5 68 aa6.1□□□□□ -1.43
SHROOM4-204ENST00000483955 SEC11AP67812 179 aa6.1□□□□□ -1.43
SHROOM4-204ENST00000483955 SS18Q15532 418 aa6.1□□□□□ -1.43
SHROOM4-204ENST00000483955 RNASE13Q5GAN3 156 aaKnown RBP6.1□□□□□ -1.43
SHROOM4-204ENST00000483955 UBE2WQ96B02 151 aa6.1□□□□□ -1.43
SHROOM4-204ENST00000483955 RMI2Q96E14 147 aa6.1□□□□□ -1.43
SHROOM4-204ENST00000483955 OPRPNQ99935 248 aaPredicted RBP6.1□□□□□ -1.43
SHROOM4-204ENST00000483955 IGKV3OR2-268A0A0C4DH90 116 aa6.09□□□□□ -1.43
SHROOM4-204ENST00000483955 C20orf202A1L168 122 aa6.09□□□□□ -1.43
SHROOM4-204ENST00000483955 GCSHP23434 173 aa6.09□□□□□ -1.43
SHROOM4-204ENST00000483955 UBE2D1P51668 147 aa6.09□□□□□ -1.43
SHROOM4-204ENST00000483955 AKR1D1P51857 326 aa6.09□□□□□ -1.43
SHROOM4-204ENST00000483955 CLPSL2Q6UWE3 100 aa6.09□□□□□ -1.43
SHROOM4-204ENST00000483955 LINC00173Q6ZV60 143 aa6.09□□□□□ -1.43
SHROOM4-204ENST00000483955 CST9LQ9H4G1 147 aa6.09□□□□□ -1.43
SHROOM4-204ENST00000483955 ALMS1Q8TCU4 4167 aa6.09□□□□□ -1.44
SHROOM4-204ENST00000483955 TRAV13-1A0A0B4J241 112 aa6.08□□□□□ -1.44
SHROOM4-204ENST00000483955 LINC00959A0A1B0GUT2 108 aa6.08□□□□□ -1.44
SHROOM4-204ENST00000483955 F8VRH5 84 aa6.08□□□□□ -1.44
SHROOM4-204ENST00000483955 SYS1-DBNDD2H3BUS1 97 aa6.08□□□□□ -1.44
SHROOM4-204ENST00000483955 TRIAP1O43715 76 aa6.08□□□□□ -1.44
SHROOM4-204ENST00000483955 C3orf79P0CE67 100 aa6.08□□□□□ -1.44
SHROOM4-204ENST00000483955 KRTDAPP60985 99 aa6.08□□□□□ -1.44
SHROOM4-204ENST00000483955 ENHOQ6UWT2 76 aa6.08□□□□□ -1.44
SHROOM4-204ENST00000483955 SPATA12Q7Z6I5 190 aa6.08□□□□□ -1.44
SHROOM4-204ENST00000483955 NFE4Q86UQ8 179 aa6.08□□□□□ -1.44
SHROOM4-204ENST00000483955 FAM104AQ969W3 186 aa6.08□□□□□ -1.44
SHROOM4-204ENST00000483955 COX11Q9Y6N1 276 aa6.08□□□□□ -1.44
SHROOM4-204ENST00000483955 LCE6AA0A183 80 aa6.07□□□□□ -1.44
SHROOM4-204ENST00000483955 HERVK_113P63121 156 aa6.07□□□□□ -1.44
SHROOM4-204ENST00000483955 ZC2HC1BQ5TFG8 222 aa6.07□□□□□ -1.44
SHROOM4-204ENST00000483955 FAM19A3Q7Z5A8 133 aa6.07□□□□□ -1.44
SHROOM4-204ENST00000483955 TM2D2Q9BX73 214 aa6.07□□□□□ -1.44
SHROOM4-204ENST00000483955 GEMIN7Q9H840 131 aaKnown RBP6.07□□□□□ -1.44
SHROOM4-204ENST00000483955 IGKV2D-24A0A075B6R9 120 aa6.06□□□□□ -1.44
SHROOM4-204ENST00000483955 TINCRA0A1B0GVN0 87 aa6.06□□□□□ -1.44
SHROOM4-204ENST00000483955 IGLC3P0DOY3 106 aa6.06□□□□□ -1.44
SHROOM4-204ENST00000483955 PLNP26678 52 aa6.06□□□□□ -1.44
SHROOM4-204ENST00000483955 LINC01545Q5VT33 79 aa6.06□□□□□ -1.44
SHROOM4-204ENST00000483955 CD164L2Q6UWJ8 174 aa6.06□□□□□ -1.44
SHROOM4-204ENST00000483955 Q6ZR54 194 aa6.06□□□□□ -1.44
SHROOM4-204ENST00000483955 OR10D4PQ8NGN7 298 aa6.06□□□□□ -1.44
SHROOM4-204ENST00000483955 CHCHD10Q8WYQ3 142 aaPredicted RBP6.06□□□□□ -1.44
SHROOM4-204ENST00000483955 KRTAP1-5Q9BYS1 174 aa6.06□□□□□ -1.44
SHROOM4-204ENST00000483955 Q9HAA7 133 aa6.06□□□□□ -1.44
SHROOM4-204ENST00000483955 LYSTQ99698 3801 aa6.06□□□□□ -1.44
SHROOM4-204ENST00000483955 IGLV10-54A0A075B6I4 117 aa6.05□□□□□ -1.44
SHROOM4-204ENST00000483955 FAM229AH3BQW9 127 aa6.05□□□□□ -1.44
SHROOM4-204ENST00000483955 XCL1P47992 114 aa6.05□□□□□ -1.44
SHROOM4-204ENST00000483955 LINC00242Q5T6M2 205 aa6.05□□□□□ -1.44
SHROOM4-204ENST00000483955 CHAC1Q9BUX1 264 aa6.05□□□□□ -1.44
SHROOM4-204ENST00000483955 MRPL35Q9NZE8 188 aaKnown RBP6.05□□□□□ -1.44
SHROOM4-204ENST00000483955 TGP01266 2768 aa6.05□□□□□ -1.44
SHROOM4-204ENST00000483955 VPS13DQ5THJ4 4388 aa6.04□□□□□ -1.44
SHROOM4-204ENST00000483955 IGLV4-69A0A075B6H9 119 aa6.04□□□□□ -1.44
SHROOM4-204ENST00000483955 A0A0J9YXV3 536 aa6.04□□□□□ -1.44
SHROOM4-204ENST00000483955 H3BRM9 83 aa6.04□□□□□ -1.44
SHROOM4-204ENST00000483955 M0R2N4 97 aa6.04□□□□□ -1.44
SHROOM4-204ENST00000483955 DPM2O94777 84 aa6.04□□□□□ -1.44
SHROOM4-204ENST00000483955 IGKCP01834 107 aa6.04□□□□□ -1.44
SHROOM4-204ENST00000483955 C6orf223Q8N319 242 aa6.04□□□□□ -1.44
SHROOM4-204ENST00000483955 DNAH6Q9C0G6 4158 aa6.03□□□□□ -1.44
SHROOM4-204ENST00000483955 IGLV5-45A0A087WSX0 123 aa6.03□□□□□ -1.44
SHROOM4-204ENST00000483955 IGHV3OR16-9A0A0B4J2B5 98 aa6.03□□□□□ -1.44
SHROOM4-204ENST00000483955 GAGE12HA6NDE8 117 aa6.03□□□□□ -1.44
SHROOM4-204ENST00000483955 COX7A2LO14548 114 aa6.03□□□□□ -1.44
SHROOM4-204ENST00000483955 PSCAO43653 123 aa6.03□□□□□ -1.44
SHROOM4-204ENST00000483955 C1orf134Q5TEV5 83 aa6.03□□□□□ -1.44
SHROOM4-204ENST00000483955 LINC01561Q8N1V8 128 aa6.03□□□□□ -1.44
SHROOM4-204ENST00000483955 DNAH1Q9P2D7 4330 aa6.02□□□□□ -1.45
SHROOM4-204ENST00000483955 A0A087WZ39 114 aa6.02□□□□□ -1.45
SHROOM4-204ENST00000483955 C11orf86A6NJI1 115 aa6.02□□□□□ -1.45
SHROOM4-204ENST00000483955 APOMO95445 188 aa6.02□□□□□ -1.45
SHROOM4-204ENST00000483955 ZNF22P17026 224 aaPredicted RBP6.02□□□□□ -1.45
SHROOM4-204ENST00000483955 FOXI1Q12951 378 aa6.02□□□□□ -1.45
SHROOM4-204ENST00000483955 TMEM170BQ5T4T1 132 aa6.02□□□□□ -1.45
SHROOM4-204ENST00000483955 CDKN2A-AS1Q9UH64 79 aa6.02□□□□□ -1.45
SHROOM4-204ENST00000483955 SEC61GP60059 68 aa6.01□□□□□ -1.45
SHROOM4-204ENST00000483955 HERVK_113P61574 105 aa6.01□□□□□ -1.45
SHROOM4-204ENST00000483955 JOSD1Q15040 202 aaPredicted RBP6.01□□□□□ -1.45
SHROOM4-204ENST00000483955 KRTAP26-1Q6PEX3 210 aa6.01□□□□□ -1.45
SHROOM4-204ENST00000483955 PMCHL2Q9BQD1 86 aa6.01□□□□□ -1.45
SHROOM4-204ENST00000483955 IGHV1-58A0A0C4DH39 117 aa6□□□□□ -1.45
SHROOM4-204ENST00000483955 COX6A2Q02221 97 aa6□□□□□ -1.45
SHROOM4-204ENST00000483955 Q6ZRN7 208 aaPredicted RBP6□□□□□ -1.45
SHROOM4-204ENST00000483955 C5orf38Q86SI9 138 aa6□□□□□ -1.45
SHROOM4-204ENST00000483955 C14orf177Q52M58 125 aa5.99□□□□□ -1.45
SHROOM4-204ENST00000483955 KMT2AQ03164 3969 aa5.98□□□□□ -1.45
SHROOM4-204ENST00000483955 IGHV3-64A0A075B6Q5 118 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms