RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 PPDPFLQ8WWR9 84 aa6.86□□□□□ -1.31
LIMK1-205ENST00000483414 C9orf85Q96MD7 179 aa6.86□□□□□ -1.31
LIMK1-205ENST00000483414 TEN1Q86WV5 123 aa6.85□□□□□ -1.31
LIMK1-205ENST00000483414 SLC25A29Q8N8R3 303 aa6.85□□□□□ -1.31
LIMK1-205ENST00000483414 DAND5Q8N907 189 aa6.85□□□□□ -1.31
LIMK1-205ENST00000483414 B9D2Q9BPU9 175 aa6.85□□□□□ -1.31
LIMK1-205ENST00000483414 RHODO00212 210 aa6.85□□□□□ -1.31
LIMK1-205ENST00000483414 DNAH6Q9C0G6 4158 aa6.85□□□□□ -1.31
LIMK1-205ENST00000483414 IGLV4-3A0A075B6K6 122 aa6.85□□□□□ -1.31
LIMK1-205ENST00000483414 ZNF22P17026 224 aaPredicted RBP6.85□□□□□ -1.31
LIMK1-205ENST00000483414 C10orf126Q8N4M7 172 aa6.85□□□□□ -1.31
LIMK1-205ENST00000483414 LINC00612Q8N6U2 182 aa6.85□□□□□ -1.31
LIMK1-205ENST00000483414 TRGV1A0A0A0MS02 117 aa6.84□□□□□ -1.31
LIMK1-205ENST00000483414 NXPH4O95158 308 aa6.84□□□□□ -1.31
LIMK1-205ENST00000483414 IGHV3-30P01768 117 aa6.84□□□□□ -1.31
LIMK1-205ENST00000483414 IGHV3-30-5P0DP03 117 aa6.84□□□□□ -1.31
LIMK1-205ENST00000483414 RETNQ9HD89 108 aa6.84□□□□□ -1.31
LIMK1-205ENST00000483414 LEPROTO15243 131 aa6.84□□□□□ -1.31
LIMK1-205ENST00000483414 SLC25A20O43772 301 aa6.84□□□□□ -1.31
LIMK1-205ENST00000483414 GAGE2BQ13066 116 aa6.84□□□□□ -1.31
LIMK1-205ENST00000483414 RHOHQ15669 191 aa6.84□□□□□ -1.31
LIMK1-205ENST00000483414 DEFB135Q30KP9 77 aa6.84□□□□□ -1.31
LIMK1-205ENST00000483414 GAGE2EQ4V326 116 aa6.84□□□□□ -1.31
LIMK1-205ENST00000483414 GAGE2DQ9UEU5 116 aa6.84□□□□□ -1.31
LIMK1-205ENST00000483414 IGHV3-30-3P0DP02 117 aa6.83□□□□□ -1.32
LIMK1-205ENST00000483414 CHCHD5Q9BSY4 110 aa6.83□□□□□ -1.32
LIMK1-205ENST00000483414 VPS13DQ5THJ4 4388 aa6.83□□□□□ -1.32
LIMK1-205ENST00000483414 TRAV13-1A0A0B4J241 112 aa6.83□□□□□ -1.32
LIMK1-205ENST00000483414 EIF4EBP3O60516 100 aaPredicted RBP6.83□□□□□ -1.32
LIMK1-205ENST00000483414 SNCGO76070 127 aa6.83□□□□□ -1.32
LIMK1-205ENST00000483414 UBE2D1P51668 147 aa6.83□□□□□ -1.32
LIMK1-205ENST00000483414 RPL32P62910 135 aaKnown RBP6.83□□□□□ -1.32
LIMK1-205ENST00000483414 ZNF415Q09FC8 603 aa6.83□□□□□ -1.32
LIMK1-205ENST00000483414 NDUFA12Q9UI09 145 aa6.83□□□□□ -1.32
LIMK1-205ENST00000483414 TRBV6-5A0A0K0K1A5 114 aa6.83□□□□□ -1.32
LIMK1-205ENST00000483414 TMEM223A0PJW6 202 aa6.83□□□□□ -1.32
LIMK1-205ENST00000483414 NDUFV3P56181 108 aaKnown RBP6.83□□□□□ -1.32
LIMK1-205ENST00000483414 Q6ZSN1 163 aa6.83□□□□□ -1.32
LIMK1-205ENST00000483414 M0R2P5 195 aa6.82□□□□□ -1.32
LIMK1-205ENST00000483414 RS1O15537 224 aa6.82□□□□□ -1.32
LIMK1-205ENST00000483414 MRPL23Q16540 153 aaKnown RBP6.82□□□□□ -1.32
LIMK1-205ENST00000483414 CFAP161Q6P656 301 aa6.82□□□□□ -1.32
LIMK1-205ENST00000483414 MRAPQ8TCY5 172 aa6.82□□□□□ -1.32
LIMK1-205ENST00000483414 C11orf68Q9H3H3 251 aaKnown RBP6.82□□□□□ -1.32
LIMK1-205ENST00000483414 TMEM263Q8WUH6 116 aaKnown RBP6.82□□□□□ -1.32
LIMK1-205ENST00000483414 SMIM9A6NGZ8 99 aa6.81□□□□□ -1.32
LIMK1-205ENST00000483414 C15orf53Q8NAA6 179 aa6.81□□□□□ -1.32
LIMK1-205ENST00000483414 A0A0J9YXY3 114 aa6.81□□□□□ -1.32
LIMK1-205ENST00000483414 UBE2D3P61077 147 aa6.8□□□□□ -1.32
LIMK1-205ENST00000483414 UBE2D2P62837 147 aa6.8□□□□□ -1.32
LIMK1-205ENST00000483414 DAZ2Q13117 558 aaKnown RBP6.8□□□□□ -1.32
LIMK1-205ENST00000483414 MEIG1Q5JSS6 88 aa6.8□□□□□ -1.32
LIMK1-205ENST00000483414 STAB2Q8WWQ8 2551 aa6.8□□□□□ -1.32
LIMK1-205ENST00000483414 IGHV4-28A0A0C4DH34 117 aa6.8□□□□□ -1.32
LIMK1-205ENST00000483414 GAGE12JA6NER3 117 aa6.8□□□□□ -1.32
LIMK1-205ENST00000483414 GAGE7O76087 117 aa6.8□□□□□ -1.32
LIMK1-205ENST00000483414 GAGE12FP0CL80 117 aa6.8□□□□□ -1.32
LIMK1-205ENST00000483414 GAGE12GP0CL81 117 aa6.8□□□□□ -1.32
LIMK1-205ENST00000483414 GAGE12IP0CL82 117 aa6.8□□□□□ -1.32
LIMK1-205ENST00000483414 MIFP14174 115 aa6.8□□□□□ -1.32
LIMK1-205ENST00000483414 GAGE4Q13068 117 aa6.8□□□□□ -1.32
LIMK1-205ENST00000483414 CLEC2BQ92478 149 aa6.8□□□□□ -1.32
LIMK1-205ENST00000483414 PPDPFQ9H3Y8 114 aa6.8□□□□□ -1.32
LIMK1-205ENST00000483414 ALMS1Q8TCU4 4167 aa6.79□□□□□ -1.32
LIMK1-205ENST00000483414 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.79□□□□□ -1.32
LIMK1-205ENST00000483414 COX6CP09669 75 aa6.79□□□□□ -1.32
LIMK1-205ENST00000483414 POM121L12Q8N7R1 296 aa6.79□□□□□ -1.32
LIMK1-205ENST00000483414 C16orf74Q96GX8 76 aa6.79□□□□□ -1.32
LIMK1-205ENST00000483414 KLK5Q9Y337 293 aaPredicted RBP6.79□□□□□ -1.32
LIMK1-205ENST00000483414 IGHV3-33P01772 117 aa6.79□□□□□ -1.32
LIMK1-205ENST00000483414 TOMM7Q9P0U1 55 aa6.79□□□□□ -1.32
LIMK1-205ENST00000483414 CELA1Q9UNI1 258 aa6.79□□□□□ -1.32
LIMK1-205ENST00000483414 TRGV2A0A075B6R0 118 aa6.78□□□□□ -1.32
LIMK1-205ENST00000483414 PIK3CD-AS1Q5SR53 167 aa6.78□□□□□ -1.32
LIMK1-205ENST00000483414 CDKN2A-AS1Q9UH64 79 aa6.78□□□□□ -1.32
LIMK1-205ENST00000483414 IFITM1P13164 125 aa6.78□□□□□ -1.32
LIMK1-205ENST00000483414 ADAMTSL4-AS1Q5T5F5 129 aa6.78□□□□□ -1.32
LIMK1-205ENST00000483414 EDA2RQ9HAV5 297 aa6.78□□□□□ -1.32
LIMK1-205ENST00000483414 KMT2AQ03164 3969 aa6.78□□□□□ -1.32
LIMK1-205ENST00000483414 TGP01266 2768 aa6.78□□□□□ -1.32
LIMK1-205ENST00000483414 LOC107984640A0A0U1RRK4 108 aa6.77□□□□□ -1.33
LIMK1-205ENST00000483414 TMEM262E9PQX1 116 aa6.77□□□□□ -1.33
LIMK1-205ENST00000483414 CIRBPQ14011 172 aaKnown RBP6.77□□□□□ -1.33
LIMK1-205ENST00000483414 FRAS1Q86XX4 4008 aa6.77□□□□□ -1.33
LIMK1-205ENST00000483414 IGHV1-58A0A0C4DH39 117 aa6.77□□□□□ -1.33
LIMK1-205ENST00000483414 ATXN8Q156A1 80 aa6.77□□□□□ -1.33
LIMK1-205ENST00000483414 C2orf82Q6UX34 121 aa6.77□□□□□ -1.33
LIMK1-205ENST00000483414 TRAV8-4A0A0B4J246 113 aa6.77□□□□□ -1.33
LIMK1-205ENST00000483414 UBE2L6O14933 153 aa6.77□□□□□ -1.33
LIMK1-205ENST00000483414 ATP6V0E2Q8NHE4 81 aa6.77□□□□□ -1.33
LIMK1-205ENST00000483414 NOP10Q9NPE3 64 aaKnown RBP6.77□□□□□ -1.33
LIMK1-205ENST00000483414 AMELXQ99217 191 aa6.76□□□□□ -1.33
LIMK1-205ENST00000483414 RPL36AP83881 106 aaKnown RBP6.76□□□□□ -1.33
LIMK1-205ENST00000483414 DEFB121Q5J5C9 76 aa6.76□□□□□ -1.33
LIMK1-205ENST00000483414 Q6ZTI0 123 aa6.76□□□□□ -1.33
LIMK1-205ENST00000483414 RPL36ALQ969Q0 106 aaKnown RBP6.76□□□□□ -1.33
LIMK1-205ENST00000483414 Q9H8V8 135 aa6.76□□□□□ -1.33
LIMK1-205ENST00000483414 TRIAP1O43715 76 aa6.75□□□□□ -1.33
LIMK1-205ENST00000483414 RPL13AP40429 203 aaKnown RBP6.75□□□□□ -1.33
LIMK1-205ENST00000483414 VSIG2Q96IQ7 327 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms