RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 EDDM3BP56851 147 aa1.59□□□□□ -2.15
SF3B1-210ENST00000482158 SMIM11AP58511 58 aa1.59□□□□□ -2.15
SF3B1-210ENST00000482158 UNQ6190/PRO20217Q6UXQ8 127 aa1.59□□□□□ -2.15
SF3B1-210ENST00000482158 PATE1Q8WXA2 126 aa1.59□□□□□ -2.15
SF3B1-210ENST00000482158 DMAC1Q96GE9 116 aa1.59□□□□□ -2.15
SF3B1-210ENST00000482158 LIMD2Q9BT23 127 aa1.59□□□□□ -2.15
SF3B1-210ENST00000482158 CDC42SE2Q9NRR3 84 aa1.59□□□□□ -2.15
SF3B1-210ENST00000482158 TIAM2Q8IVF5 1701 aa1.59□□□□□ -2.16
SF3B1-210ENST00000482158 ARFGEF3Q5TH69 2177 aa1.59□□□□□ -2.16
SF3B1-210ENST00000482158 FCGBPQ9Y6R7 5405 aaPredicted RBP1.58□□□□□ -2.16
SF3B1-210ENST00000482158 BCORQ6W2J9 1755 aa1.58□□□□□ -2.16
SF3B1-210ENST00000482158 CLASP1Q7Z460 1538 aa1.58□□□□□ -2.16
SF3B1-210ENST00000482158 TMEM14DPA8MWL7 114 aa1.58□□□□□ -2.16
SF3B1-210ENST00000482158 C10orf142B7Z368 130 aa1.58□□□□□ -2.16
SF3B1-210ENST00000482158 F8WEM9 126 aa1.58□□□□□ -2.16
SF3B1-210ENST00000482158 CHKB-CPT1BH3BT56 60 aa1.58□□□□□ -2.16
SF3B1-210ENST00000482158 COX6CP09669 75 aa1.58□□□□□ -2.16
SF3B1-210ENST00000482158 SMIM13P0DJ93 91 aa1.58□□□□□ -2.16
SF3B1-210ENST00000482158 NDUFA4L2Q9NRX3 87 aa1.58□□□□□ -2.16
SF3B1-210ENST00000482158 ORMDL1Q9P0S3 153 aa1.58□□□□□ -2.16
SF3B1-210ENST00000482158 LAMC1P11047 1609 aa1.58□□□□□ -2.16
SF3B1-210ENST00000482158 CICQ96RK0 1608 aaPredicted RBP1.58□□□□□ -2.16
SF3B1-210ENST00000482158 INTS1Q8N201 2190 aaKnown RBP1.58□□□□□ -2.16
SF3B1-210ENST00000482158 IFT172Q9UG01 1749 aa1.57□□□□□ -2.16
SF3B1-210ENST00000482158 ZNF236Q9UL36 1845 aa1.57□□□□□ -2.16
SF3B1-210ENST00000482158 CEP170BQ9Y4F5 1589 aaPredicted RBP1.57□□□□□ -2.16
SF3B1-210ENST00000482158 TRBV6-7A0A0A0MS04 114 aa1.57□□□□□ -2.16
SF3B1-210ENST00000482158 A0A0J9YY99 117 aa1.57□□□□□ -2.16
SF3B1-210ENST00000482158 LOC101927531A0A1B0GV80 90 aa1.57□□□□□ -2.16
SF3B1-210ENST00000482158 FAM223BA6NKX1 122 aa1.57□□□□□ -2.16
SF3B1-210ENST00000482158 HMGN2P05204 90 aaKnown RBP1.57□□□□□ -2.16
SF3B1-210ENST00000482158 SFTA3P0C7M3 94 aa1.57□□□□□ -2.16
SF3B1-210ENST00000482158 ARL14EPLP0DKL9 152 aa1.57□□□□□ -2.16
SF3B1-210ENST00000482158 ZNF56Q15929 161 aa1.57□□□□□ -2.16
SF3B1-210ENST00000482158 C20orf197Q8N268 126 aa1.57□□□□□ -2.16
SF3B1-210ENST00000482158 DYNLRB1Q9NP97 96 aa1.57□□□□□ -2.16
SF3B1-210ENST00000482158 MRPL36Q9P0J6 103 aaKnown RBP1.57□□□□□ -2.16
SF3B1-210ENST00000482158 PAPPAQ13219 1627 aa1.57□□□□□ -2.16
SF3B1-210ENST00000482158 ALS2Q96Q42 1657 aa1.57□□□□□ -2.16
SF3B1-210ENST00000482158 FLG2Q5D862 2391 aaPredicted RBP1.57□□□□□ -2.16
SF3B1-210ENST00000482158 TENM1Q9UKZ4 2725 aa1.56□□□□□ -2.16
SF3B1-210ENST00000482158 ADGRB2O60241 1585 aa1.56□□□□□ -2.16
SF3B1-210ENST00000482158 CDC42BPGQ6DT37 1551 aa1.56□□□□□ -2.16
SF3B1-210ENST00000482158 TRBV6-8A0A0A6YYG3 113 aa1.56□□□□□ -2.16
SF3B1-210ENST00000482158 IQCF6A8MYZ5 107 aa1.56□□□□□ -2.16
SF3B1-210ENST00000482158 HMGN4O00479 90 aa1.56□□□□□ -2.16
SF3B1-210ENST00000482158 DEFB121Q5J5C9 76 aa1.56□□□□□ -2.16
SF3B1-210ENST00000482158 XAF1Q6GPH4 301 aa1.56□□□□□ -2.16
SF3B1-210ENST00000482158 TMEM14BQ9NUH8 114 aa1.56□□□□□ -2.16
SF3B1-210ENST00000482158 LENEPQ9Y5L5 61 aa1.56□□□□□ -2.16
SF3B1-210ENST00000482158 ABCA4P78363 2273 aa1.56□□□□□ -2.16
SF3B1-210ENST00000482158 MRC1P22897 1456 aa1.56□□□□□ -2.16
SF3B1-210ENST00000482158 KIAA0586Q9BVV6 1533 aa1.56□□□□□ -2.16
SF3B1-210ENST00000482158 NHSQ6T4R5 1651 aa1.55□□□□□ -2.16
SF3B1-210ENST00000482158 IGLV3-32A0A0A0MS00 114 aa1.55□□□□□ -2.16
SF3B1-210ENST00000482158 MYMXA0A1B0GTQ4 84 aa1.55□□□□□ -2.16
SF3B1-210ENST00000482158 ZNF815PA8K554 130 aa1.55□□□□□ -2.16
SF3B1-210ENST00000482158 IGLV3-1P01715 115 aa1.55□□□□□ -2.16
SF3B1-210ENST00000482158 ELOF1P60002 83 aaKnown RBP1.55□□□□□ -2.16
SF3B1-210ENST00000482158 C4orf3Q8WVX3 66 aa1.55□□□□□ -2.16
SF3B1-210ENST00000482158 PROK2Q9HC23 129 aa1.55□□□□□ -2.16
SF3B1-210ENST00000482158 KMT2BQ9UMN6 2715 aaPredicted RBP1.55□□□□□ -2.16
SF3B1-210ENST00000482158 DIP2AQ14689 1571 aa1.55□□□□□ -2.16
SF3B1-210ENST00000482158 ERCC6L2Q5T890 1561 aa1.55□□□□□ -2.16
SF3B1-210ENST00000482158 MAST1Q9Y2H9 1570 aa1.55□□□□□ -2.16
SF3B1-210ENST00000482158 ABCA5Q8WWZ7 1642 aa1.55□□□□□ -2.16
SF3B1-210ENST00000482158 BIVM-ERCC5R4GMW8 1640 aa1.55□□□□□ -2.16
SF3B1-210ENST00000482158 CROCC2H7BZ55 1655 aa1.55□□□□□ -2.16
SF3B1-210ENST00000482158 ZNF831Q5JPB2 1677 aa1.55□□□□□ -2.16
SF3B1-210ENST00000482158 IGKV3D-7A0A0C4DH55 119 aa1.54□□□□□ -2.16
SF3B1-210ENST00000482158 IGKV3OR2-268A0A0C4DH90 116 aa1.54□□□□□ -2.16
SF3B1-210ENST00000482158 TRBV6-4A0A1B0GX49 114 aa1.54□□□□□ -2.16
SF3B1-210ENST00000482158 HIGD1CA8MV81 97 aa1.54□□□□□ -2.16
SF3B1-210ENST00000482158 IGHV3-30P01768 117 aa1.54□□□□□ -2.16
SF3B1-210ENST00000482158 IGHV3-30-5P0DP03 117 aa1.54□□□□□ -2.16
SF3B1-210ENST00000482158 COX8AP10176 69 aa1.54□□□□□ -2.16
SF3B1-210ENST00000482158 PDE6GP18545 87 aa1.54□□□□□ -2.16
SF3B1-210ENST00000482158 SSBP1Q04837 148 aaKnown RBP1.54□□□□□ -2.16
SF3B1-210ENST00000482158 PSMG4Q5JS54 123 aa1.54□□□□□ -2.16
SF3B1-210ENST00000482158 PSENENQ9NZ42 101 aa1.54□□□□□ -2.16
SF3B1-210ENST00000482158 RALGAPBQ86X10 1494 aa1.54□□□□□ -2.16
SF3B1-210ENST00000482158 CD163L1Q9NR16 1453 aa1.54□□□□□ -2.16
SF3B1-210ENST00000482158 PHRF1Q9P1Y6 1649 aaKnown RBP1.54□□□□□ -2.16
SF3B1-210ENST00000482158 C5P01031 1676 aa1.54□□□□□ -2.16
SF3B1-210ENST00000482158 ANKRD36CQ5JPF3 1778 aa1.54□□□□□ -2.16
SF3B1-210ENST00000482158 LOC285095A0A1B0GVY8 99 aa1.53□□□□□ -2.16
SF3B1-210ENST00000482158 FXYD1O00168 92 aa1.53□□□□□ -2.16
SF3B1-210ENST00000482158 DNAJC13O75165 2243 aa1.53□□□□□ -2.16
SF3B1-210ENST00000482158 PPYP01298 95 aa1.53□□□□□ -2.16
SF3B1-210ENST00000482158 SAA2P0DJI9 122 aaPredicted RBP1.53□□□□□ -2.16
SF3B1-210ENST00000482158 RNASE3P12724 160 aaKnown RBP1.53□□□□□ -2.16
SF3B1-210ENST00000482158 CCL3L1P16619 93 aa1.53□□□□□ -2.16
SF3B1-210ENST00000482158 GCHFRP30047 84 aa1.53□□□□□ -2.16
SF3B1-210ENST00000482158 PLGLAQ15195 96 aa1.53□□□□□ -2.16
SF3B1-210ENST00000482158 NHSL1Q5SYE7 1610 aa1.53□□□□□ -2.16
SF3B1-210ENST00000482158 Q6JHZ5 121 aa1.53□□□□□ -2.16
SF3B1-210ENST00000482158 SPAG17Q6Q759 2223 aa1.53□□□□□ -2.16
SF3B1-210ENST00000482158 RICTORQ6R327 1708 aa1.53□□□□□ -2.16
SF3B1-210ENST00000482158 ADCY10Q96PN6 1610 aa1.53□□□□□ -2.16
SF3B1-210ENST00000482158 SYCP2Q9BX26 1530 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms