RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 H3BNG1 76 aa19.22■□□□□ 0.67
TNFRSF25-213ENST00000480393 LELP1Q5T871 98 aa19.22■□□□□ 0.67
TNFRSF25-213ENST00000480393 NDUFA12Q9UI09 145 aa19.21■□□□□ 0.67
TNFRSF25-213ENST00000480393 TAX1BP3O14907 124 aa19.2■□□□□ 0.66
TNFRSF25-213ENST00000480393 COX11Q9Y6N1 276 aa19.2■□□□□ 0.66
TNFRSF25-213ENST00000480393 SMIM1B2RUZ4 78 aa19.19■□□□□ 0.66
TNFRSF25-213ENST00000480393 Q6ZVH6 145 aa19.19■□□□□ 0.66
TNFRSF25-213ENST00000480393 SPANXB1Q9NS25 103 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF25-213ENST00000480393 IGLV5-39A0A0G2JS06 123 aa19.18■□□□□ 0.66
TNFRSF25-213ENST00000480393 K7EP13 123 aa19.18■□□□□ 0.66
TNFRSF25-213ENST00000480393 ZFAND6Q6FIF0 208 aa19.18■□□□□ 0.66
TNFRSF25-213ENST00000480393 NOTCH1P46531 2555 aa19.18■□□□□ 0.66
TNFRSF25-213ENST00000480393 LINC00959A0A1B0GUT2 108 aa19.17■□□□□ 0.66
TNFRSF25-213ENST00000480393 C10orf126Q8N4M7 172 aa19.17■□□□□ 0.66
TNFRSF25-213ENST00000480393 DEFB131BA0A096LNP1 70 aa19.17■□□□□ 0.66
TNFRSF25-213ENST00000480393 A0A0J9YXY3 114 aa19.16■□□□□ 0.66
TNFRSF25-213ENST00000480393 SS18Q15532 418 aa19.15■□□□□ 0.66
TNFRSF25-213ENST00000480393 NHP2Q9NX24 153 aaKnown RBP19.15■□□□□ 0.66
TNFRSF25-213ENST00000480393 TMEM238C9JI98 176 aa19.14■□□□□ 0.66
TNFRSF25-213ENST00000480393 CLPSL2Q6UWE3 100 aa19.14■□□□□ 0.66
TNFRSF25-213ENST00000480393 LYPD5Q6UWN5 251 aa19.14■□□□□ 0.66
TNFRSF25-213ENST00000480393 SMIM13P0DJ93 91 aa19.14■□□□□ 0.65
TNFRSF25-213ENST00000480393 ANGP03950 147 aaKnown RBP19.13■□□□□ 0.65
TNFRSF25-213ENST00000480393 NDUFA1O15239 70 aa19.12■□□□□ 0.65
TNFRSF25-213ENST00000480393 TMEM238LA0A1B0GVL6 79 aa19.11■□□□□ 0.65
TNFRSF25-213ENST00000480393 A6NJY4 79 aa19.11■□□□□ 0.65
TNFRSF25-213ENST00000480393 LINC00269Q8N2A0 174 aa19.11■□□□□ 0.65
TNFRSF25-213ENST00000480393 RAB37Q96AX2 223 aa19.11■□□□□ 0.65
TNFRSF25-213ENST00000480393 Q8N3U1 123 aa19.1■□□□□ 0.65
TNFRSF25-213ENST00000480393 IGHV3OR16-9A0A0B4J2B5 98 aa19.09■□□□□ 0.65
TNFRSF25-213ENST00000480393 K7ERJ3 54 aa19.09■□□□□ 0.65
TNFRSF25-213ENST00000480393 CCL25O15444 150 aa19.09■□□□□ 0.65
TNFRSF25-213ENST00000480393 IGHV3-30P01768 117 aa19.08■□□□□ 0.65
TNFRSF25-213ENST00000480393 IGHV3-30-5P0DP03 117 aa19.08■□□□□ 0.65
TNFRSF25-213ENST00000480393 XCL1P47992 114 aa19.08■□□□□ 0.65
TNFRSF25-213ENST00000480393 NBEAL1Q6ZS30 2694 aa19.07■□□□□ 0.64
TNFRSF25-213ENST00000480393 TRAV10A0A0B4J240 114 aa19.07■□□□□ 0.64
TNFRSF25-213ENST00000480393 REG3AQ06141 175 aa19.07■□□□□ 0.64
TNFRSF25-213ENST00000480393 Q9H8V8 135 aa19.07■□□□□ 0.64
TNFRSF25-213ENST00000480393 A0A087WZ39 114 aa19.06■□□□□ 0.64
TNFRSF25-213ENST00000480393 C5orf38Q86SI9 138 aa19.06■□□□□ 0.64
TNFRSF25-213ENST00000480393 C9orf118A6NHY6 69 aa19.05■□□□□ 0.64
TNFRSF25-213ENST00000480393 TENM3Q9P273 2699 aa19.05■□□□□ 0.64
TNFRSF25-213ENST00000480393 COX7B2Q8TF08 81 aa19.05■□□□□ 0.64
TNFRSF25-213ENST00000480393 MGAM2Q2M2H8 2515 aa19.04■□□□□ 0.64
TNFRSF25-213ENST00000480393 VAMP3Q15836 100 aa19.03■□□□□ 0.64
TNFRSF25-213ENST00000480393 LITAFQ99732 161 aa19.03■□□□□ 0.64
TNFRSF25-213ENST00000480393 TOMM7Q9P0U1 55 aa19.03■□□□□ 0.64
TNFRSF25-213ENST00000480393 TIMM17BO60830 172 aa19.02■□□□□ 0.63
TNFRSF25-213ENST00000480393 H3BUT2 72 aa19.01■□□□□ 0.63
TNFRSF25-213ENST00000480393 CIRBPQ14011 172 aaKnown RBP19.01■□□□□ 0.63
TNFRSF25-213ENST00000480393 SPANXDQ9BXN6 97 aa19.01■□□□□ 0.63
TNFRSF25-213ENST00000480393 SPANXCQ9NY87 97 aa19.01■□□□□ 0.63
TNFRSF25-213ENST00000480393 A0A1B0GWB2 263 aa19■□□□□ 0.63
TNFRSF25-213ENST00000480393 CHCHD10Q8WYQ3 142 aaPredicted RBP19■□□□□ 0.63
TNFRSF25-213ENST00000480393 HERV-K104P63124 156 aa19■□□□□ 0.63
TNFRSF25-213ENST00000480393 RPL24P83731 157 aaKnown RBP19■□□□□ 0.63
TNFRSF25-213ENST00000480393 KRTAP21-3Q3LHN1 58 aa19■□□□□ 0.63
TNFRSF25-213ENST00000480393 ZNF625Q96I27 306 aaPredicted RBP19■□□□□ 0.63
TNFRSF25-213ENST00000480393 IGHV3-33P01772 117 aa18.99■□□□□ 0.63
TNFRSF25-213ENST00000480393 MIAQ16674 131 aa18.99■□□□□ 0.63
TNFRSF25-213ENST00000480393 CD164L2Q6UWJ8 174 aa18.99■□□□□ 0.63
TNFRSF25-213ENST00000480393 MUSTN1Q8IVN3 82 aa18.99■□□□□ 0.63
TNFRSF25-213ENST00000480393 NAA38Q9BRA0 125 aaKnown RBP18.99■□□□□ 0.63
TNFRSF25-213ENST00000480393 KLK12Q9UKR0 248 aa18.99■□□□□ 0.63
TNFRSF25-213ENST00000480393 IGLV10-54A0A075B6I4 117 aa18.98■□□□□ 0.63
TNFRSF25-213ENST00000480393 WFDC10BQ8IUB3 73 aa18.98■□□□□ 0.63
TNFRSF25-213ENST00000480393 PRSS2P07478 247 aa18.97■□□□□ 0.63
TNFRSF25-213ENST00000480393 ESRGQ1W209 222 aa18.97■□□□□ 0.63
TNFRSF25-213ENST00000480393 ADAMTSL4-AS1Q5T5F5 129 aa18.97■□□□□ 0.63
TNFRSF25-213ENST00000480393 MEIG1Q5JSS6 88 aa18.97■□□□□ 0.63
TNFRSF25-213ENST00000480393 LINC01561Q8N1V8 128 aa18.97■□□□□ 0.63
TNFRSF25-213ENST00000480393 C15orf53Q8NAA6 179 aa18.96■□□□□ 0.63
TNFRSF25-213ENST00000480393 COX7A2LO14548 114 aa18.95■□□□□ 0.62
TNFRSF25-213ENST00000480393 APOMO95445 188 aa18.95■□□□□ 0.62
TNFRSF25-213ENST00000480393 CRPP02741 224 aa18.94■□□□□ 0.62
TNFRSF25-213ENST00000480393 B9D2Q9BPU9 175 aa18.94■□□□□ 0.62
TNFRSF25-213ENST00000480393 PRR34Q9NV39 138 aa18.94■□□□□ 0.62
TNFRSF25-213ENST00000480393 A4D1N5 150 aa18.93■□□□□ 0.62
TNFRSF25-213ENST00000480393 A0A1W2PPM0 123 aa18.91■□□□□ 0.62
TNFRSF25-213ENST00000480393 IGLL5B9A064 214 aa18.91■□□□□ 0.62
TNFRSF25-213ENST00000480393 MALP21145 153 aa18.91■□□□□ 0.62
TNFRSF25-213ENST00000480393 NPC2P61916 151 aa18.91■□□□□ 0.62
TNFRSF25-213ENST00000480393 IFITM1P13164 125 aa18.9■□□□□ 0.62
TNFRSF25-213ENST00000480393 SFTA2Q6UW10 78 aa18.9■□□□□ 0.62
TNFRSF25-213ENST00000480393 DAND5Q8N907 189 aa18.9■□□□□ 0.62
TNFRSF25-213ENST00000480393 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.89■□□□□ 0.61
TNFRSF25-213ENST00000480393 A0A0U1RRA0 63 aa18.89■□□□□ 0.61
TNFRSF25-213ENST00000480393 CFC1BP0CG36 223 aa18.89■□□□□ 0.61
TNFRSF25-213ENST00000480393 CFC1P0CG37 223 aa18.89■□□□□ 0.61
TNFRSF25-213ENST00000480393 UBE2V1Q13404 147 aa18.89■□□□□ 0.61
TNFRSF25-213ENST00000480393 C6orf226Q5I0X4 101 aa18.89■□□□□ 0.61
TNFRSF25-213ENST00000480393 ENHOQ6UWT2 76 aa18.89■□□□□ 0.61
TNFRSF25-213ENST00000480393 UBE2WQ96B02 151 aa18.89■□□□□ 0.61
TNFRSF25-213ENST00000480393 GAGE12HA6NDE8 117 aa18.88■□□□□ 0.61
TNFRSF25-213ENST00000480393 FABP2P12104 132 aa18.88■□□□□ 0.61
TNFRSF25-213ENST00000480393 FOXI1Q12951 378 aa18.88■□□□□ 0.61
TNFRSF25-213ENST00000480393 Q8IZM0 81 aa18.88■□□□□ 0.61
TNFRSF25-213ENST00000480393 PGPEP1Q9NXJ5 209 aa18.88■□□□□ 0.61
TNFRSF25-213ENST00000480393 COPS9Q8WXC6 57 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms