RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 GTSF1LQ9H1H1 148 aa5.96□□□□□ -1.46
VPS45-208ENST00000478999 GEMIN7Q9H840 131 aaKnown RBP5.96□□□□□ -1.46
VPS45-208ENST00000478999 PGPEP1Q9NXJ5 209 aa5.96□□□□□ -1.46
VPS45-208ENST00000478999 IGHV3-73A0A0B4J1V6 119 aa5.95□□□□□ -1.46
VPS45-208ENST00000478999 IGHV3-30-3P0DP02 117 aa5.95□□□□□ -1.46
VPS45-208ENST00000478999 HERVK_113P63121 156 aa5.95□□□□□ -1.46
VPS45-208ENST00000478999 DGAT2L7PQ6IED9 249 aa5.95□□□□□ -1.46
VPS45-208ENST00000478999 C10orf126Q8N4M7 172 aa5.95□□□□□ -1.46
VPS45-208ENST00000478999 VSIG2Q96IQ7 327 aa5.95□□□□□ -1.46
VPS45-208ENST00000478999 SPANXDQ9BXN6 97 aa5.95□□□□□ -1.46
VPS45-208ENST00000478999 PPDPFQ9H3Y8 114 aa5.95□□□□□ -1.46
VPS45-208ENST00000478999 SPANXCQ9NY87 97 aa5.95□□□□□ -1.46
VPS45-208ENST00000478999 TRBV6-4A0A1B0GX49 114 aa5.94□□□□□ -1.46
VPS45-208ENST00000478999 IFITM1P13164 125 aa5.94□□□□□ -1.46
VPS45-208ENST00000478999 RPL35AP18077 110 aaKnown RBP5.94□□□□□ -1.46
VPS45-208ENST00000478999 UBE2D3P61077 147 aa5.94□□□□□ -1.46
VPS45-208ENST00000478999 UBE2D2P62837 147 aa5.94□□□□□ -1.46
VPS45-208ENST00000478999 DEFB135Q30KP9 77 aa5.94□□□□□ -1.46
VPS45-208ENST00000478999 Q6ZSN1 163 aa5.94□□□□□ -1.46
VPS45-208ENST00000478999 ATP6V0E2Q8NHE4 81 aa5.94□□□□□ -1.46
VPS45-208ENST00000478999 FAM104AQ969W3 186 aa5.94□□□□□ -1.46
VPS45-208ENST00000478999 OPRPNQ99935 248 aaPredicted RBP5.94□□□□□ -1.46
VPS45-208ENST00000478999 NAA38Q9BRA0 125 aaKnown RBP5.94□□□□□ -1.46
VPS45-208ENST00000478999 PRO1854Q9UHT4 67 aa5.94□□□□□ -1.46
VPS45-208ENST00000478999 NUPR2A6NF83 97 aa5.93□□□□□ -1.46
VPS45-208ENST00000478999 SMIM9A6NGZ8 99 aa5.93□□□□□ -1.46
VPS45-208ENST00000478999 M0QXV9 152 aa5.93□□□□□ -1.46
VPS45-208ENST00000478999 NDUFA1O15239 70 aa5.93□□□□□ -1.46
VPS45-208ENST00000478999 TSPAN13O95857 204 aa5.93□□□□□ -1.46
VPS45-208ENST00000478999 LY6G6CO95867 125 aa5.93□□□□□ -1.46
VPS45-208ENST00000478999 GAGE13Q4V321 117 aa5.93□□□□□ -1.46
VPS45-208ENST00000478999 Q6ZUT4 128 aa5.93□□□□□ -1.46
VPS45-208ENST00000478999 VPS25Q9BRG1 176 aa5.93□□□□□ -1.46
VPS45-208ENST00000478999 NDUFA12Q9UI09 145 aa5.93□□□□□ -1.46
VPS45-208ENST00000478999 KLK5Q9Y337 293 aaPredicted RBP5.93□□□□□ -1.46
VPS45-208ENST00000478999 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.92□□□□□ -1.46
VPS45-208ENST00000478999 IGHV3OR16-12A0A075B7B8 117 aa5.92□□□□□ -1.46
VPS45-208ENST00000478999 IGLV5-39A0A0G2JS06 123 aa5.92□□□□□ -1.46
VPS45-208ENST00000478999 A0A0J9YWU9 116 aa5.92□□□□□ -1.46
VPS45-208ENST00000478999 IGKV2-29A2NJV5 120 aaPredicted RBP5.92□□□□□ -1.46
VPS45-208ENST00000478999 GIG44P09565 113 aaPredicted RBP5.92□□□□□ -1.46
VPS45-208ENST00000478999 CFC1BP0CG36 223 aa5.92□□□□□ -1.46
VPS45-208ENST00000478999 CFC1P0CG37 223 aa5.92□□□□□ -1.46
VPS45-208ENST00000478999 CIRBPQ14011 172 aaKnown RBP5.92□□□□□ -1.46
VPS45-208ENST00000478999 Q6ZTI0 123 aa5.92□□□□□ -1.46
VPS45-208ENST00000478999 CSNK1G2-AS1Q8NCQ2 148 aa5.92□□□□□ -1.46
VPS45-208ENST00000478999 KIR2DL5BQ8NHK3 375 aa5.92□□□□□ -1.46
VPS45-208ENST00000478999 TMEM243Q9BU79 118 aa5.92□□□□□ -1.46
VPS45-208ENST00000478999 VPS13DQ5THJ4 4388 aa5.91□□□□□ -1.46
VPS45-208ENST00000478999 TRGV2A0A075B6R0 118 aa5.91□□□□□ -1.46
VPS45-208ENST00000478999 PLAC8L1A1L4L8 177 aa5.91□□□□□ -1.46
VPS45-208ENST00000478999 APOMO95445 188 aa5.91□□□□□ -1.46
VPS45-208ENST00000478999 MIAQ16674 131 aa5.91□□□□□ -1.46
VPS45-208ENST00000478999 RNF151Q2KHN1 245 aa5.91□□□□□ -1.46
VPS45-208ENST00000478999 LINC00612Q8N6U2 182 aa5.91□□□□□ -1.46
VPS45-208ENST00000478999 TMEM101Q96IK0 257 aa5.91□□□□□ -1.46
VPS45-208ENST00000478999 PRO0461Q9UI25 63 aa5.91□□□□□ -1.46
VPS45-208ENST00000478999 A4D1N5 150 aa5.9□□□□□ -1.46
VPS45-208ENST00000478999 H3BMG7 143 aa5.9□□□□□ -1.46
VPS45-208ENST00000478999 UBE2L6O14933 153 aa5.9□□□□□ -1.46
VPS45-208ENST00000478999 PRM2P04554 102 aa5.9□□□□□ -1.46
VPS45-208ENST00000478999 HERV-K104P63124 156 aa5.9□□□□□ -1.46
VPS45-208ENST00000478999 SFTA2Q6UW10 78 aa5.9□□□□□ -1.46
VPS45-208ENST00000478999 DEFB104AQ8WTQ1 72 aa5.9□□□□□ -1.46
VPS45-208ENST00000478999 NOP10Q9NPE3 64 aaKnown RBP5.9□□□□□ -1.46
VPS45-208ENST00000478999 ERG28Q9UKR5 140 aa5.9□□□□□ -1.46
VPS45-208ENST00000478999 TRGV4A0A0C4DH28 118 aa5.89□□□□□ -1.47
VPS45-208ENST00000478999 IGHV3-38A0A0C4DH36 116 aa5.89□□□□□ -1.47
VPS45-208ENST00000478999 LOC107984156A0A0G2JMH3 177 aa5.89□□□□□ -1.47
VPS45-208ENST00000478999 IGHV3-33P01772 117 aa5.89□□□□□ -1.47
VPS45-208ENST00000478999 LINC00694P0DN24 101 aa5.89□□□□□ -1.47
VPS45-208ENST00000478999 CEMP1Q6PRD7 247 aaPredicted RBP5.89□□□□□ -1.47
VPS45-208ENST00000478999 ARL17AQ8IVW1 177 aa5.89□□□□□ -1.47
VPS45-208ENST00000478999 LINC01600Q96MT4 127 aa5.89□□□□□ -1.47
VPS45-208ENST00000478999 LITAFQ99732 161 aa5.89□□□□□ -1.47
VPS45-208ENST00000478999 CDC42SE2Q9NRR3 84 aa5.89□□□□□ -1.47
VPS45-208ENST00000478999 TRAV8-3A0A0A6YYJ7 113 aa5.88□□□□□ -1.47
VPS45-208ENST00000478999 TRBV30A0A0K0K1B3 111 aa5.88□□□□□ -1.47
VPS45-208ENST00000478999 LINC00242Q5T6M2 205 aa5.88□□□□□ -1.47
VPS45-208ENST00000478999 MUSTN1Q8IVN3 82 aa5.88□□□□□ -1.47
VPS45-208ENST00000478999 KRTAP4-5Q9BYR2 181 aa5.88□□□□□ -1.47
VPS45-208ENST00000478999 Q9UF83 564 aa5.88□□□□□ -1.47
VPS45-208ENST00000478999 CDKN2A-AS1Q9UH64 79 aa5.88□□□□□ -1.47
VPS45-208ENST00000478999 PKHD1P08F94 4074 aa5.88□□□□□ -1.47
VPS45-208ENST00000478999 IGHV3-64A0A075B6Q5 118 aa5.87□□□□□ -1.47
VPS45-208ENST00000478999 TEX48A0A1B0GUV7 120 aa5.87□□□□□ -1.47
VPS45-208ENST00000478999 GAGE12JA6NER3 117 aa5.87□□□□□ -1.47
VPS45-208ENST00000478999 LYRM9A8MSI8 78 aa5.87□□□□□ -1.47
VPS45-208ENST00000478999 GAGE7O76087 117 aa5.87□□□□□ -1.47
VPS45-208ENST00000478999 COX6CP09669 75 aa5.87□□□□□ -1.47
VPS45-208ENST00000478999 SPINK8P0C7L1 97 aa5.87□□□□□ -1.47
VPS45-208ENST00000478999 GAGE12FP0CL80 117 aa5.87□□□□□ -1.47
VPS45-208ENST00000478999 GAGE12GP0CL81 117 aa5.87□□□□□ -1.47
VPS45-208ENST00000478999 GAGE12IP0CL82 117 aa5.87□□□□□ -1.47
VPS45-208ENST00000478999 SCGB1C2P0DMR2 95 aa5.87□□□□□ -1.47
VPS45-208ENST00000478999 GAGE4Q13068 117 aa5.87□□□□□ -1.47
VPS45-208ENST00000478999 GAGE5Q13069 117 aa5.87□□□□□ -1.47
VPS45-208ENST00000478999 WFDC2Q14508 124 aa5.87□□□□□ -1.47
VPS45-208ENST00000478999 NTM-AS1Q6ZSK4 140 aa5.87□□□□□ -1.47
VPS45-208ENST00000478999 DNAH6Q9C0G6 4158 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms