RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 H3BUT2 72 aa1.24□□□□□ -2.21
CCNL1-220ENST00000478454 CFDP00746 253 aaPredicted RBP1.24□□□□□ -2.21
CCNL1-220ENST00000478454 CNBPP62633 177 aaKnown RBP1.24□□□□□ -2.21
CCNL1-220ENST00000478454 PDE6HQ13956 83 aa1.24□□□□□ -2.21
CCNL1-220ENST00000478454 WFDC2Q14508 124 aa1.24□□□□□ -2.21
CCNL1-220ENST00000478454 PMCHL1Q16048 86 aa1.24□□□□□ -2.21
CCNL1-220ENST00000478454 SPATA45Q537H7 98 aa1.24□□□□□ -2.21
CCNL1-220ENST00000478454 ZNF818PQ6ZRF7 136 aa1.24□□□□□ -2.21
CCNL1-220ENST00000478454 LINC00299Q6ZSB3 139 aa1.24□□□□□ -2.21
CCNL1-220ENST00000478454 AMELYQ99218 206 aa1.24□□□□□ -2.21
CCNL1-220ENST00000478454 PRO1854Q9UHT4 67 aa1.24□□□□□ -2.21
CCNL1-220ENST00000478454 C22orf24Q9Y442 160 aa1.24□□□□□ -2.21
CCNL1-220ENST00000478454 UNC13CQ8NB66 2214 aa1.24□□□□□ -2.21
CCNL1-220ENST00000478454 FREM1Q5H8C1 2179 aa1.24□□□□□ -2.21
CCNL1-220ENST00000478454 PI4KAP42356 2102 aa1.24□□□□□ -2.21
CCNL1-220ENST00000478454 A0A1B0GUL6 1792 aa1.24□□□□□ -2.21
CCNL1-220ENST00000478454 PAPPA2Q9BXP8 1791 aa1.24□□□□□ -2.21
CCNL1-220ENST00000478454 PTPRZ1P23471 2315 aaPredicted RBP1.23□□□□□ -2.21
CCNL1-220ENST00000478454 BAZ2BQ9UIF8 2168 aaKnown RBP1.23□□□□□ -2.21
CCNL1-220ENST00000478454 TRBV7-3A0A075B6L6 115 aa1.23□□□□□ -2.21
CCNL1-220ENST00000478454 TRBV7-1A0A0A6YYK4 115 aa1.23□□□□□ -2.21
CCNL1-220ENST00000478454 TEX49A0A1B0GTD5 131 aa1.23□□□□□ -2.21
CCNL1-220ENST00000478454 CHKB-CPT1BH3BT56 60 aa1.23□□□□□ -2.21
CCNL1-220ENST00000478454 IGHV3-33P01772 117 aa1.23□□□□□ -2.21
CCNL1-220ENST00000478454 IGLC2P0DOY2 106 aa1.23□□□□□ -2.21
CCNL1-220ENST00000478454 IGLC3P0DOY3 106 aa1.23□□□□□ -2.21
CCNL1-220ENST00000478454 EDDM3BP56851 147 aa1.23□□□□□ -2.21
CCNL1-220ENST00000478454 HMGN3Q15651 99 aa1.23□□□□□ -2.21
CCNL1-220ENST00000478454 BVES-AS1Q5T3Y7 98 aa1.23□□□□□ -2.21
CCNL1-220ENST00000478454 NDUFA11Q86Y39 141 aa1.23□□□□□ -2.21
CCNL1-220ENST00000478454 DMAC1Q96GE9 116 aa1.23□□□□□ -2.21
CCNL1-220ENST00000478454 WFDC10AQ9H1F0 79 aa1.23□□□□□ -2.21
CCNL1-220ENST00000478454 HIGD1BQ9P298 99 aa1.23□□□□□ -2.21
CCNL1-220ENST00000478454 SIP14410 1827 aa1.23□□□□□ -2.21
CCNL1-220ENST00000478454 TPRP12270 2363 aaKnown RBP1.23□□□□□ -2.21
CCNL1-220ENST00000478454 RP1L1Q8IWN7 2480 aaPredicted RBP1.23□□□□□ -2.21
CCNL1-220ENST00000478454 ZDBF2Q9HCK1 2354 aa1.22□□□□□ -2.21
CCNL1-220ENST00000478454 LAMA4Q16363 1823 aa1.22□□□□□ -2.21
CCNL1-220ENST00000478454 SSC5DA1L4H1 1573 aa1.22□□□□□ -2.21
CCNL1-220ENST00000478454 TENM1Q9UKZ4 2725 aa1.22□□□□□ -2.21
CCNL1-220ENST00000478454 KNTC1P50748 2209 aa1.22□□□□□ -2.21
CCNL1-220ENST00000478454 COX6CP09669 75 aa1.22□□□□□ -2.21
CCNL1-220ENST00000478454 SNRPFP62306 86 aaKnown RBP1.22□□□□□ -2.21
CCNL1-220ENST00000478454 KRTAP26-1Q6PEX3 210 aa1.22□□□□□ -2.21
CCNL1-220ENST00000478454 Q8N6K4 173 aa1.22□□□□□ -2.21
CCNL1-220ENST00000478454 LIMD2Q9BT23 127 aa1.22□□□□□ -2.21
CCNL1-220ENST00000478454 MED13Q9UHV7 2174 aa1.22□□□□□ -2.21
CCNL1-220ENST00000478454 CNOT1A5YKK6 2376 aaKnown RBP1.22□□□□□ -2.21
CCNL1-220ENST00000478454 SPTBN4Q9H254 2564 aa1.22□□□□□ -2.21
CCNL1-220ENST00000478454 ZNF236Q9UL36 1845 aa1.22□□□□□ -2.21
CCNL1-220ENST00000478454 GOLGB1Q14789 3259 aaKnown RBP1.21□□□□□ -2.21
CCNL1-220ENST00000478454 ALPK2Q86TB3 2170 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 MED12Q93074 2177 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 PCNTO95613 3336 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 COL4A1P02462 1669 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 TRAV22A0A0B4J277 110 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 NUPR2A6NF83 97 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 ZNF815PA8K554 130 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 PPP1R17O96001 155 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 DNAL4O96015 105 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 PPYP01298 95 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 ACYP1P07311 99 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 SMIM13P0DJ93 91 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 UBE2D1P51668 147 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 SSBP1Q04837 148 aaKnown RBP1.21□□□□□ -2.22
CCNL1-220ENST00000478454 ZNF56Q15929 161 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 PATE1Q8WXA2 126 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 FAM167A-AS1Q96KT0 104 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 DYNLRB1Q9NP97 96 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 KLK9Q9UKQ9 250 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 CR1P17927 2039 aa1.21□□□□□ -2.22
CCNL1-220ENST00000478454 COL4A2P08572 1712 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 GVINP1Q7Z2Y8 2422 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 MYO7AQ13402 2215 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 COL4A5P29400 1685 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 MAP1BP46821 2468 aaKnown RBP1.2□□□□□ -2.22
CCNL1-220ENST00000478454 A0A0J9YY99 117 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 TRBV6-4A0A1B0GX49 114 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 HIGD1CA8MV81 97 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 JMJD7-PLA2G4BH0Y9G9 81 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 H3BRN7 92 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 SPAG11BQ08648 103 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 TMEM170BQ5T4T1 132 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 SPAG11AQ6PDA7 123 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 HEPN1Q6WQI6 88 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 FAM223AQ8IWN6 122 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 C20orf197Q8N268 126 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 C18orf32Q8TCD1 76 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 ODF3Q96PU9 254 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 BPESC1Q9GZL8 116 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 CYSTM1Q9H1C7 97 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 PRO3102Q9H379 93 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 TMEM14CQ9P0S9 112 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 LOC285556D6RIA3 1793 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 EP300Q09472 2414 aaPredicted RBP1.2□□□□□ -2.22
CCNL1-220ENST00000478454 CEP250Q9BV73 2442 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 F5P12259 2224 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 RTTNQ86VV8 2226 aa1.2□□□□□ -2.22
CCNL1-220ENST00000478454 DDX60LQ5H9U9 1706 aaKnown RBP1.2□□□□□ -2.22
CCNL1-220ENST00000478454 PLXNB2O15031 1838 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms