RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 PSENENQ9NZ42 101 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 NEXMIFQ5QGS0 1516 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 ERICH3Q5RHP9 1530 aa1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 NCOA6Q14686 2063 aaPredicted RBP1.35□□□□□ -2.19
SMARCA1-204ENST00000478420 MYO7BQ6PIF6 2116 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 LOC285556D6RIA3 1793 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 M0R3E3 92 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 UQCR11O14957 56 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 PRR15LQ9BU68 103 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 CRCT1Q9UGL9 99 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 IQSEC2Q5JU85 1478 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 CCDC141Q6ZP82 1450 aa1.34□□□□□ -2.19
SMARCA1-204ENST00000478420 PDCD11Q14690 1871 aaKnown RBP1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 COL4A1P02462 1669 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 PEAK1Q9H792 1746 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 C7orf77A4D0Y5 90 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 H3BUT2 72 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 NCR3O14931 201 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 PRB1P04280 392 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 HMGN2P05204 90 aaKnown RBP1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 ACYP2P14621 99 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 SMIM11AP58511 58 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 LINC00643Q86TS7 51 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 SMCO4Q9NRQ5 59 aa1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
SMARCA1-204ENST00000478420 A0A096LNT2 108 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 SMIM31A0A1B0GVY4 71 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 A0A1B0GWA3 101 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 KANTRA0A1W2PQU2 76 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 DEFA5Q01523 94 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 Q5BKY6 102 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 LINC00575Q6W349 94 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 FDCSPQ8NFU4 85 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 LINC00472Q9H8W2 130 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 KNTC1P50748 2209 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 AHCTF1Q8WYP5 2266 aa1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 SUPT6HQ7KZ85 1726 aaKnown RBP1.32□□□□□ -2.2
SMARCA1-204ENST00000478420 ZFHX3Q15911 3703 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 ADAMTS12P58397 1594 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 CFAP74Q9C0B2 1584 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 A0A087WVE0 104 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 IQCF6A8MYZ5 107 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 LY6G6CO95867 125 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 CFDP00746 253 aaPredicted RBP1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 ARMS2P0C7Q2 107 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 SPRR4Q96PI1 79 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 KIF21AQ7Z4S6 1674 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 IFT172Q9UG01 1749 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 CACNA1CQ13936 2221 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 ZNF236Q9UL36 1845 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 CLIP1P30622 1438 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 ANKARQ7Z5J8 1434 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 NCOA2Q15596 1464 aa1.31□□□□□ -2.2
SMARCA1-204ENST00000478420 ZDBF2Q9HCK1 2354 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 ABCC2Q92887 1545 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 ABCA8O94911 1581 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 CHD8Q9HCK8 2581 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 TECTAO75443 2155 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 PDCD5O14737 125 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 ACYP1P07311 99 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 MGPP08493 103 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 HMGN3Q15651 99 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 KCPQ6ZWJ8 1503 aa1.3□□□□□ -2.2
SMARCA1-204ENST00000478420 GVQW2A0A096LPI5 108 aaPredicted RBP1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 MYMXA0A1B0GTQ4 84 aa1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 SPINT3P49223 89 aa1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 COX17Q14061 63 aa1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 C18orf32Q8TCD1 76 aa1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 SMIM4Q8WVI0 70 aa1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 PLAC4Q8WY50 150 aa1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 F5P12259 2224 aa1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 FLG2Q5D862 2391 aaPredicted RBP1.29□□□□□ -2.2
SMARCA1-204ENST00000478420 MACF1Q9UPN3 7388 aaKnown RBP1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 LEPROTL1O95214 131 aa1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 KRTAP4-1Q9BYQ7 146 aa1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 PROK2Q9HC23 129 aa1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 PLAC8Q9NZF1 115 aa1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 ABCC1P33527 1531 aa1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 SSC5DA1L4H1 1573 aa1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 TMEM131LA2VDJ0 1609 aa1.28□□□□□ -2.2
SMARCA1-204ENST00000478420 IQGAP3Q86VI3 1631 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 UGGT2Q9NYU1 1516 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 D6R8Y8 96 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 G3V318 75 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 RPL37P61927 97 aaKnown RBP1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 SPINK13Q1W4C9 94 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 Q6ZRX8 168 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 MUSTN1Q8IVN3 82 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 SMIM11BQ8TCY0 68 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 LINC00846Q9NV44 126 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 TRANK1O15050 2925 aa1.27□□□□□ -2.21
SMARCA1-204ENST00000478420 A0A0C4DFX4 3053 aa1.26□□□□□ -2.21
SMARCA1-204ENST00000478420 BTAF1O14981 1849 aa1.26□□□□□ -2.21
SMARCA1-204ENST00000478420 PPRC1Q5VV67 1664 aaKnown RBP1.26□□□□□ -2.21
SMARCA1-204ENST00000478420 CADP27708 2225 aa1.26□□□□□ -2.21
SMARCA1-204ENST00000478420 GOLGA4Q13439 2230 aaKnown RBP1.26□□□□□ -2.21
SMARCA1-204ENST00000478420 PLGLAQ15195 96 aa1.26□□□□□ -2.21
SMARCA1-204ENST00000478420 DEFB107AQ8IZN7 70 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms