RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 GAGE7O76087 117 aa11.68□□□□□ -0.54
TMEM53-208ENST00000476724 GAGE12FP0CL80 117 aa11.68□□□□□ -0.54
TMEM53-208ENST00000476724 GAGE12GP0CL81 117 aa11.68□□□□□ -0.54
TMEM53-208ENST00000476724 GAGE12IP0CL82 117 aa11.68□□□□□ -0.54
TMEM53-208ENST00000476724 COX6A2Q02221 97 aa11.68□□□□□ -0.54
TMEM53-208ENST00000476724 FOXI1Q12951 378 aa11.68□□□□□ -0.54
TMEM53-208ENST00000476724 TMEM243Q9BU79 118 aa11.68□□□□□ -0.54
TMEM53-208ENST00000476724 GAGE12HA6NDE8 117 aa11.67□□□□□ -0.54
TMEM53-208ENST00000476724 M0QXV9 152 aa11.67□□□□□ -0.54
TMEM53-208ENST00000476724 UBE2L6O14933 153 aa11.67□□□□□ -0.54
TMEM53-208ENST00000476724 Q1RN00 199 aa11.67□□□□□ -0.54
TMEM53-208ENST00000476724 KRTAP24-1Q3LI83 254 aa11.66□□□□□ -0.54
TMEM53-208ENST00000476724 TEN1Q86WV5 123 aa11.66□□□□□ -0.54
TMEM53-208ENST00000476724 SPATA25Q9BR10 227 aa11.66□□□□□ -0.54
TMEM53-208ENST00000476724 TRGV4A0A0C4DH28 118 aa11.66□□□□□ -0.54
TMEM53-208ENST00000476724 SIGMAR1Q99720 223 aa11.66□□□□□ -0.54
TMEM53-208ENST00000476724 H7C2G1 150 aa11.65□□□□□ -0.54
TMEM53-208ENST00000476724 TRAV13-1A0A0B4J241 112 aa11.64□□□□□ -0.55
TMEM53-208ENST00000476724 ATXN8Q156A1 80 aa11.64□□□□□ -0.55
TMEM53-208ENST00000476724 PPDPFLQ8WWR9 84 aa11.64□□□□□ -0.55
TMEM53-208ENST00000476724 COPS9Q8WXC6 57 aa11.64□□□□□ -0.55
TMEM53-208ENST00000476724 NOTCH3Q9UM47 2321 aa11.64□□□□□ -0.55
TMEM53-208ENST00000476724 SMIM1B2RUZ4 78 aa11.64□□□□□ -0.55
TMEM53-208ENST00000476724 INSL3P51460 131 aa11.63□□□□□ -0.55
TMEM53-208ENST00000476724 COX6CP09669 75 aa11.63□□□□□ -0.55
TMEM53-208ENST00000476724 Q9H8V8 135 aa11.63□□□□□ -0.55
TMEM53-208ENST00000476724 SLC25A20O43772 301 aa11.62□□□□□ -0.55
TMEM53-208ENST00000476724 FHL2Q14192 279 aa11.62□□□□□ -0.55
TMEM53-208ENST00000476724 C9orf66Q5T8R8 295 aa11.62□□□□□ -0.55
TMEM53-208ENST00000476724 HERV-K104P63124 156 aa11.61□□□□□ -0.55
TMEM53-208ENST00000476724 KIR2DL5BQ8NHK3 375 aa11.61□□□□□ -0.55
TMEM53-208ENST00000476724 F5H768 121 aa11.61□□□□□ -0.55
TMEM53-208ENST00000476724 PRIMA1Q86XR5 153 aa11.61□□□□□ -0.55
TMEM53-208ENST00000476724 LINC01600Q96MT4 127 aa11.61□□□□□ -0.55
TMEM53-208ENST00000476724 ICOSQ9Y6W8 199 aa11.61□□□□□ -0.55
TMEM53-208ENST00000476724 C9JAW5 83 aa11.6□□□□□ -0.55
TMEM53-208ENST00000476724 TRIAP1O43715 76 aa11.6□□□□□ -0.55
TMEM53-208ENST00000476724 SCGB1A1P11684 91 aa11.6□□□□□ -0.55
TMEM53-208ENST00000476724 LOC100131303A0A0U1RQF7 123 aa11.59□□□□□ -0.55
TMEM53-208ENST00000476724 PPDPFQ9H3Y8 114 aa11.59□□□□□ -0.55
TMEM53-208ENST00000476724 FBN1P35555 2871 aaKnown RBP11.59□□□□□ -0.55
TMEM53-208ENST00000476724 NPC2P61916 151 aa11.59□□□□□ -0.55
TMEM53-208ENST00000476724 LINC01620Q4KN68 170 aa11.59□□□□□ -0.55
TMEM53-208ENST00000476724 ZNF625Q96I27 306 aaPredicted RBP11.59□□□□□ -0.55
TMEM53-208ENST00000476724 TRBV6-8A0A0A6YYG3 113 aa11.58□□□□□ -0.56
TMEM53-208ENST00000476724 LINC00308Q8TCZ7 52 aa11.58□□□□□ -0.56
TMEM53-208ENST00000476724 CARD19Q96LW7 228 aa11.58□□□□□ -0.56
TMEM53-208ENST00000476724 SMIM9A6NGZ8 99 aa11.58□□□□□ -0.56
TMEM53-208ENST00000476724 ANKRD29Q8N6D5 301 aa11.58□□□□□ -0.56
TMEM53-208ENST00000476724 LINC00612Q8N6U2 182 aa11.58□□□□□ -0.56
TMEM53-208ENST00000476724 DAND5Q8N907 189 aa11.56□□□□□ -0.56
TMEM53-208ENST00000476724 WFDC9Q8NEX5 89 aa11.56□□□□□ -0.56
TMEM53-208ENST00000476724 CMYA5Q8N3K9 4069 aa11.56□□□□□ -0.56
TMEM53-208ENST00000476724 TRBV10-2A0A0K0K1G8 114 aa11.55□□□□□ -0.56
TMEM53-208ENST00000476724 RPL13AP40429 203 aaKnown RBP11.55□□□□□ -0.56
TMEM53-208ENST00000476724 GAGE6Q13070 117 aa11.55□□□□□ -0.56
TMEM53-208ENST00000476724 MEIG1Q5JSS6 88 aa11.55□□□□□ -0.56
TMEM53-208ENST00000476724 CHCHD5Q9BSY4 110 aa11.54□□□□□ -0.56
TMEM53-208ENST00000476724 TMEM262E9PQX1 116 aa11.53□□□□□ -0.56
TMEM53-208ENST00000476724 DEFB130BP0DP73 79 aa11.53□□□□□ -0.56
TMEM53-208ENST00000476724 DEFB130AP0DP74 79 aa11.53□□□□□ -0.56
TMEM53-208ENST00000476724 COX7B2Q8TF08 81 aa11.51□□□□□ -0.57
TMEM53-208ENST00000476724 CDIP1Q9H305 208 aa11.51□□□□□ -0.57
TMEM53-208ENST00000476724 IGLV4-60A0A075B6I1 120 aa11.51□□□□□ -0.57
TMEM53-208ENST00000476724 LST1O00453 97 aa11.51□□□□□ -0.57
TMEM53-208ENST00000476724 C3orf56Q8N813 242 aa11.51□□□□□ -0.57
TMEM53-208ENST00000476724 X6R8D5 127 aa11.51□□□□□ -0.57
TMEM53-208ENST00000476724 H3BT86 120 aa11.5□□□□□ -0.57
TMEM53-208ENST00000476724 STAB1Q9NY15 2570 aa11.5□□□□□ -0.57
TMEM53-208ENST00000476724 IGHV3OR16-9A0A0B4J2B5 98 aa11.5□□□□□ -0.57
TMEM53-208ENST00000476724 A0A0U1RRA0 63 aa11.5□□□□□ -0.57
TMEM53-208ENST00000476724 SOSTDC1Q6X4U4 206 aa11.5□□□□□ -0.57
TMEM53-208ENST00000476724 PRO0255Q9UI72 69 aa11.49□□□□□ -0.57
TMEM53-208ENST00000476724 MAST4O15021 2626 aa11.48□□□□□ -0.57
TMEM53-208ENST00000476724 GYPEP15421 78 aa11.48□□□□□ -0.57
TMEM53-208ENST00000476724 C2orf82Q6UX34 121 aa11.48□□□□□ -0.57
TMEM53-208ENST00000476724 NTN5Q8WTR8 489 aaPredicted RBP11.48□□□□□ -0.57
TMEM53-208ENST00000476724 A0A087WZ39 114 aa11.48□□□□□ -0.57
TMEM53-208ENST00000476724 A0A1B0GUV1 79 aa11.48□□□□□ -0.57
TMEM53-208ENST00000476724 LYRM9A8MSI8 78 aa11.48□□□□□ -0.57
TMEM53-208ENST00000476724 WIPF1O43516 503 aa11.48□□□□□ -0.57
TMEM53-208ENST00000476724 OXLD1Q5BKU9 147 aa11.47□□□□□ -0.57
TMEM53-208ENST00000476724 SHISA2Q6UWI4 295 aa11.47□□□□□ -0.57
TMEM53-208ENST00000476724 IGKV3OR2-268A0A0C4DH90 116 aa11.47□□□□□ -0.57
TMEM53-208ENST00000476724 CLEC2BQ92478 149 aa11.47□□□□□ -0.57
TMEM53-208ENST00000476724 LINC00959A0A1B0GUT2 108 aa11.45□□□□□ -0.58
TMEM53-208ENST00000476724 COX7A2LO14548 114 aa11.45□□□□□ -0.58
TMEM53-208ENST00000476724 APOC4P55056 127 aa11.45□□□□□ -0.58
TMEM53-208ENST00000476724 UBE2WQ96B02 151 aa11.45□□□□□ -0.58
TMEM53-208ENST00000476724 TOMM7Q9P0U1 55 aa11.45□□□□□ -0.58
TMEM53-208ENST00000476724 TRAV13-2A0A0B4J235 113 aa11.44□□□□□ -0.58
TMEM53-208ENST00000476724 FAM222AQ5U5X8 452 aa11.44□□□□□ -0.58
TMEM53-208ENST00000476724 IBA57-AS1B1ANH7 110 aa11.44□□□□□ -0.58
TMEM53-208ENST00000476724 SS18Q15532 418 aa11.43□□□□□ -0.58
TMEM53-208ENST00000476724 PAX4O43316 350 aa11.42□□□□□ -0.58
TMEM53-208ENST00000476724 LINC01561Q8N1V8 128 aa11.42□□□□□ -0.58
TMEM53-208ENST00000476724 MIR7-3HGQ8N6C7 128 aa11.42□□□□□ -0.58
TMEM53-208ENST00000476724 KRTAP10-11P60412 298 aa11.42□□□□□ -0.58
TMEM53-208ENST00000476724 TEX49A0A1B0GTD5 131 aa11.41□□□□□ -0.58
TMEM53-208ENST00000476724 XGP55808 180 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms