RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 IGHV4-30-2A0A087WSY4 118 aa6.08□□□□□ -1.44
VAPB-205ENST00000476395 IGKV3D-7A0A0C4DH55 119 aa6.08□□□□□ -1.44
VAPB-205ENST00000476395 PROK1P58294 105 aa6.08□□□□□ -1.44
VAPB-205ENST00000476395 FAM218AQ96MZ4 157 aa6.08□□□□□ -1.44
VAPB-205ENST00000476395 APCP25054 2843 aa6.08□□□□□ -1.44
VAPB-205ENST00000476395 PRM2P04554 102 aa6.08□□□□□ -1.44
VAPB-205ENST00000476395 COX6CP09669 75 aa6.07□□□□□ -1.44
VAPB-205ENST00000476395 COX7CP15954 63 aa6.07□□□□□ -1.44
VAPB-205ENST00000476395 PRIMA1Q86XR5 153 aa6.07□□□□□ -1.44
VAPB-205ENST00000476395 ANKRD17O75179 2603 aaKnown RBP6.07□□□□□ -1.44
VAPB-205ENST00000476395 NOTCH3Q9UM47 2321 aa6.07□□□□□ -1.44
VAPB-205ENST00000476395 SPANXDQ9BXN6 97 aa6.07□□□□□ -1.44
VAPB-205ENST00000476395 ANK3Q12955 4377 aaKnown RBP6.06□□□□□ -1.44
VAPB-205ENST00000476395 A0A096LNT2 108 aa6.06□□□□□ -1.44
VAPB-205ENST00000476395 A0A0J9YX75 114 aa6.06□□□□□ -1.44
VAPB-205ENST00000476395 K7EMT4 169 aa6.06□□□□□ -1.44
VAPB-205ENST00000476395 MIAQ16674 131 aa6.06□□□□□ -1.44
VAPB-205ENST00000476395 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.06□□□□□ -1.44
VAPB-205ENST00000476395 CD28P10747 220 aa6.06□□□□□ -1.44
VAPB-205ENST00000476395 LINC00643Q86TS7 51 aa6.06□□□□□ -1.44
VAPB-205ENST00000476395 C20orf203Q8NBC4 194 aa6.06□□□□□ -1.44
VAPB-205ENST00000476395 ACANP16112 2415 aa6.05□□□□□ -1.44
VAPB-205ENST00000476395 K7EQG2 157 aa6.05□□□□□ -1.44
VAPB-205ENST00000476395 SONP18583 2426 aaKnown RBP6.05□□□□□ -1.44
VAPB-205ENST00000476395 USP17L23D6RBM5 183 aa6.05□□□□□ -1.44
VAPB-205ENST00000476395 SOSTDC1Q6X4U4 206 aa6.05□□□□□ -1.44
VAPB-205ENST00000476395 Q6ZSN1 163 aa6.05□□□□□ -1.44
VAPB-205ENST00000476395 C5orf38Q86SI9 138 aa6.05□□□□□ -1.44
VAPB-205ENST00000476395 RBMY1BA6NDE4 496 aaKnown RBP6.04□□□□□ -1.44
VAPB-205ENST00000476395 RBMY1EA6NEQ0 496 aaKnown RBP6.04□□□□□ -1.44
VAPB-205ENST00000476395 RBMY1DP0C7P1 496 aaKnown RBP6.04□□□□□ -1.44
VAPB-205ENST00000476395 HTN1P15515 57 aa6.04□□□□□ -1.44
VAPB-205ENST00000476395 CCL19Q99731 98 aa6.04□□□□□ -1.44
VAPB-205ENST00000476395 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.04□□□□□ -1.44
VAPB-205ENST00000476395 IGKV2-29A2NJV5 120 aaPredicted RBP6.04□□□□□ -1.44
VAPB-205ENST00000476395 BAALC-AS2P0C853 105 aa6.04□□□□□ -1.44
VAPB-205ENST00000476395 CD164L2Q6UWJ8 174 aa6.04□□□□□ -1.44
VAPB-205ENST00000476395 IGHV1-58A0A0C4DH39 117 aa6.03□□□□□ -1.44
VAPB-205ENST00000476395 KNCNA6PVL3 124 aa6.03□□□□□ -1.44
VAPB-205ENST00000476395 PPP1R17O96001 155 aa6.03□□□□□ -1.44
VAPB-205ENST00000476395 CRYGAP11844 174 aa6.03□□□□□ -1.44
VAPB-205ENST00000476395 CR1P17927 2039 aa6.03□□□□□ -1.44
VAPB-205ENST00000476395 TEX15Q9BXT5 2789 aa6.03□□□□□ -1.44
VAPB-205ENST00000476395 IGHV3-38A0A0C4DH36 116 aa6.03□□□□□ -1.44
VAPB-205ENST00000476395 IGHV4-59P01825 116 aa6.03□□□□□ -1.44
VAPB-205ENST00000476395 WFDC9Q8NEX5 89 aa6.03□□□□□ -1.44
VAPB-205ENST00000476395 VSIG2Q96IQ7 327 aa6.03□□□□□ -1.44
VAPB-205ENST00000476395 IMUPQ9GZP8 106 aa6.03□□□□□ -1.44
VAPB-205ENST00000476395 CCL24O00175 119 aa6.03□□□□□ -1.44
VAPB-205ENST00000476395 SPINK13Q1W4C9 94 aa6.03□□□□□ -1.44
VAPB-205ENST00000476395 BEAN1Q3B7T3 259 aa6.03□□□□□ -1.44
VAPB-205ENST00000476395 UNC79Q9P2D8 2635 aa6.02□□□□□ -1.44
VAPB-205ENST00000476395 A8MTW9 85 aa6.02□□□□□ -1.45
VAPB-205ENST00000476395 APOC4P55056 127 aa6.02□□□□□ -1.45
VAPB-205ENST00000476395 C18orf65Q6ZTR6 163 aa6.02□□□□□ -1.45
VAPB-205ENST00000476395 CDKN2A-AS1Q9UH64 79 aa6.02□□□□□ -1.45
VAPB-205ENST00000476395 HILS1P60008 231 aa6.02□□□□□ -1.45
VAPB-205ENST00000476395 UBE2E2Q96LR5 201 aa6.02□□□□□ -1.45
VAPB-205ENST00000476395 C14orf132Q9NPU4 83 aa6.02□□□□□ -1.45
VAPB-205ENST00000476395 MSMBP08118 114 aa6.02□□□□□ -1.45
VAPB-205ENST00000476395 PIK3CD-AS1Q5SR53 167 aa6.02□□□□□ -1.45
VAPB-205ENST00000476395 MRPS36P82909 103 aaKnown RBP6.01□□□□□ -1.45
VAPB-205ENST00000476395 COX6A2Q02221 97 aa6.01□□□□□ -1.45
VAPB-205ENST00000476395 NF1P21359 2839 aa6.01□□□□□ -1.45
VAPB-205ENST00000476395 ATP5G1P05496 136 aa6.01□□□□□ -1.45
VAPB-205ENST00000476395 HIST1H4AP62805 103 aaKnown RBP6.01□□□□□ -1.45
VAPB-205ENST00000476395 DEFB112Q30KQ8 113 aa6.01□□□□□ -1.45
VAPB-205ENST00000476395 UPK3BQ9BT76 320 aa6.01□□□□□ -1.45
VAPB-205ENST00000476395 SETXQ7Z333 2677 aaKnown RBP6.01□□□□□ -1.45
VAPB-205ENST00000476395 IGHV1OR15-1A0A075B7D0 117 aa6.01□□□□□ -1.45
VAPB-205ENST00000476395 COX7A2LO14548 114 aa6.01□□□□□ -1.45
VAPB-205ENST00000476395 SYNJ2BPP57105 145 aa6.01□□□□□ -1.45
VAPB-205ENST00000476395 LINC00308Q8TCZ7 52 aa6.01□□□□□ -1.45
VAPB-205ENST00000476395 CHCHD7Q9BUK0 85 aa6.01□□□□□ -1.45
VAPB-205ENST00000476395 SETD2Q9BYW2 2564 aaPredicted RBP6□□□□□ -1.45
VAPB-205ENST00000476395 CIRBPQ14011 172 aaKnown RBP6□□□□□ -1.45
VAPB-205ENST00000476395 FHL2Q14192 279 aa6□□□□□ -1.45
VAPB-205ENST00000476395 Q9H8V8 135 aa6□□□□□ -1.45
VAPB-205ENST00000476395 LINC00846Q9NV44 126 aa6□□□□□ -1.45
VAPB-205ENST00000476395 MTORP42345 2549 aa6□□□□□ -1.45
VAPB-205ENST00000476395 PAX4O43316 350 aa5.99□□□□□ -1.45
VAPB-205ENST00000476395 FSHBP01225 129 aa5.99□□□□□ -1.45
VAPB-205ENST00000476395 ACYP1P07311 99 aa5.99□□□□□ -1.45
VAPB-205ENST00000476395 RPL18AQ02543 176 aaKnown RBP5.99□□□□□ -1.45
VAPB-205ENST00000476395 C11orf72Q8NBR9 251 aa5.99□□□□□ -1.45
VAPB-205ENST00000476395 ZNF702PQ9H963 129 aa5.99□□□□□ -1.45
VAPB-205ENST00000476395 ITPR3Q14573 2671 aa5.99□□□□□ -1.45
VAPB-205ENST00000476395 FLNAP21333 2647 aaKnown RBP5.98□□□□□ -1.45
VAPB-205ENST00000476395 KRTAP10-9P60411 292 aa5.98□□□□□ -1.45
VAPB-205ENST00000476395 LINC00467Q9BRT7 94 aa5.98□□□□□ -1.45
VAPB-205ENST00000476395 A0A087WYN8 130 aa5.98□□□□□ -1.45
VAPB-205ENST00000476395 ATOX1O00244 68 aa5.98□□□□□ -1.45
VAPB-205ENST00000476395 SLPIP03973 132 aa5.98□□□□□ -1.45
VAPB-205ENST00000476395 UBE2D4Q9Y2X8 147 aa5.98□□□□□ -1.45
VAPB-205ENST00000476395 NCR3O14931 201 aa5.97□□□□□ -1.45
VAPB-205ENST00000476395 MYO9AB2RTY4 2548 aa5.97□□□□□ -1.45
VAPB-205ENST00000476395 SMIM26A0A096LP01 95 aa5.97□□□□□ -1.45
VAPB-205ENST00000476395 J3QL48 77 aa5.97□□□□□ -1.45
VAPB-205ENST00000476395 MAPK1IP1LQ8NDC0 245 aa5.97□□□□□ -1.45
VAPB-205ENST00000476395 J3QKU1 62 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms