RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 GAGE12JA6NER3 117 aa13.44□□□□□ -0.26
SYF2-204ENST00000476231 H7C423 109 aa13.44□□□□□ -0.26
SYF2-204ENST00000476231 GAGE4Q13068 117 aa13.44□□□□□ -0.26
SYF2-204ENST00000476231 GAGE5Q13069 117 aa13.44□□□□□ -0.26
SYF2-204ENST00000476231 IGHV4-28A0A0C4DH34 117 aa13.43□□□□□ -0.26
SYF2-204ENST00000476231 PSMB2P49721 201 aa13.43□□□□□ -0.26
SYF2-204ENST00000476231 FAM222AQ5U5X8 452 aa13.43□□□□□ -0.26
SYF2-204ENST00000476231 NTM-AS1Q6ZSK4 140 aa13.43□□□□□ -0.26
SYF2-204ENST00000476231 CDKN2A-AS1Q9UH64 79 aa13.43□□□□□ -0.26
SYF2-204ENST00000476231 ERG28Q9UKR5 140 aa13.43□□□□□ -0.26
SYF2-204ENST00000476231 SPINK8P0C7L1 97 aa13.42□□□□□ -0.26
SYF2-204ENST00000476231 IGLV5-39A0A0G2JS06 123 aa13.41□□□□□ -0.26
SYF2-204ENST00000476231 NDUFA1O15239 70 aa13.41□□□□□ -0.26
SYF2-204ENST00000476231 IFITM1P13164 125 aa13.41□□□□□ -0.26
SYF2-204ENST00000476231 MIAQ16674 131 aa13.41□□□□□ -0.26
SYF2-204ENST00000476231 ETDBQ3ZM63 59 aa13.41□□□□□ -0.26
SYF2-204ENST00000476231 Q8NAQ8 132 aa13.41□□□□□ -0.26
SYF2-204ENST00000476231 EIF4EBP3O60516 100 aaPredicted RBP13.41□□□□□ -0.26
SYF2-204ENST00000476231 LINC00242Q5T6M2 205 aa13.41□□□□□ -0.26
SYF2-204ENST00000476231 CMYA5Q8N3K9 4069 aa13.4□□□□□ -0.26
SYF2-204ENST00000476231 TMEM101Q96IK0 257 aa13.4□□□□□ -0.26
SYF2-204ENST00000476231 CDC42SE2Q9NRR3 84 aa13.4□□□□□ -0.26
SYF2-204ENST00000476231 TCL1BO95988 128 aa13.4□□□□□ -0.27
SYF2-204ENST00000476231 LINC00694P0DN24 101 aa13.4□□□□□ -0.27
SYF2-204ENST00000476231 LOC100131303A0A0U1RQF7 123 aa13.39□□□□□ -0.27
SYF2-204ENST00000476231 M0QXV9 152 aa13.39□□□□□ -0.27
SYF2-204ENST00000476231 SH2D6Q7Z4S9 175 aa13.39□□□□□ -0.27
SYF2-204ENST00000476231 SMCPP49901 116 aaPredicted RBP13.38□□□□□ -0.27
SYF2-204ENST00000476231 TMEM243Q9BU79 118 aa13.38□□□□□ -0.27
SYF2-204ENST00000476231 STAB1Q9NY15 2570 aa13.38□□□□□ -0.27
SYF2-204ENST00000476231 DEFB4AO15263 64 aa13.38□□□□□ -0.27
SYF2-204ENST00000476231 SCGB1C2P0DMR2 95 aa13.38□□□□□ -0.27
SYF2-204ENST00000476231 ADAMTSL4-AS1Q5T5F5 129 aa13.38□□□□□ -0.27
SYF2-204ENST00000476231 TRBV30A0A0K0K1B3 111 aa13.37□□□□□ -0.27
SYF2-204ENST00000476231 COX6A2Q02221 97 aa13.37□□□□□ -0.27
SYF2-204ENST00000476231 CIRBPQ14011 172 aaKnown RBP13.36□□□□□ -0.27
SYF2-204ENST00000476231 PRO0255Q9UI72 69 aa13.36□□□□□ -0.27
SYF2-204ENST00000476231 PRSS2P07478 247 aa13.36□□□□□ -0.27
SYF2-204ENST00000476231 DAD1P61803 113 aa13.35□□□□□ -0.27
SYF2-204ENST00000476231 SFTA2Q6UW10 78 aa13.35□□□□□ -0.27
SYF2-204ENST00000476231 UBE2L6O14933 153 aa13.34□□□□□ -0.27
SYF2-204ENST00000476231 SPART-AS1P0CW21 52 aa13.34□□□□□ -0.27
SYF2-204ENST00000476231 PPDPFQ9H3Y8 114 aa13.34□□□□□ -0.27
SYF2-204ENST00000476231 SMIM1B2RUZ4 78 aa13.34□□□□□ -0.27
SYF2-204ENST00000476231 COPS9Q8WXC6 57 aa13.34□□□□□ -0.27
SYF2-204ENST00000476231 LINC01600Q96MT4 127 aa13.34□□□□□ -0.27
SYF2-204ENST00000476231 FOXI1Q12951 378 aa13.33□□□□□ -0.28
SYF2-204ENST00000476231 MTURNQ8N3F0 131 aa13.33□□□□□ -0.28
SYF2-204ENST00000476231 MAST4O15021 2626 aa13.33□□□□□ -0.28
SYF2-204ENST00000476231 CELA1Q9UNI1 258 aa13.32□□□□□ -0.28
SYF2-204ENST00000476231 GYPEP15421 78 aa13.32□□□□□ -0.28
SYF2-204ENST00000476231 TEN1Q86WV5 123 aa13.32□□□□□ -0.28
SYF2-204ENST00000476231 SPATA25Q9BR10 227 aa13.32□□□□□ -0.28
SYF2-204ENST00000476231 NBEAL2Q6ZNJ1 2754 aa13.32□□□□□ -0.28
SYF2-204ENST00000476231 F5H768 121 aa13.31□□□□□ -0.28
SYF2-204ENST00000476231 ATP5G1P05496 136 aa13.31□□□□□ -0.28
SYF2-204ENST00000476231 HERV-K104P63124 156 aa13.31□□□□□ -0.28
SYF2-204ENST00000476231 TRAV13-1A0A0B4J241 112 aa13.31□□□□□ -0.28
SYF2-204ENST00000476231 ATXN8Q156A1 80 aa13.31□□□□□ -0.28
SYF2-204ENST00000476231 Q1RN00 199 aa13.3□□□□□ -0.28
SYF2-204ENST00000476231 PPDPFLQ8WWR9 84 aa13.3□□□□□ -0.28
SYF2-204ENST00000476231 TRBV6-8A0A0A6YYG3 113 aa13.29□□□□□ -0.28
SYF2-204ENST00000476231 GAGE12HA6NDE8 117 aa13.29□□□□□ -0.28
SYF2-204ENST00000476231 PAX4O43316 350 aa13.29□□□□□ -0.28
SYF2-204ENST00000476231 Q9H8V8 135 aa13.29□□□□□ -0.28
SYF2-204ENST00000476231 DNAH3Q8TD57 4116 aa13.29□□□□□ -0.28
SYF2-204ENST00000476231 PKD1L1Q8TDX9 2849 aa13.29□□□□□ -0.28
SYF2-204ENST00000476231 ZNF625Q96I27 306 aaPredicted RBP13.29□□□□□ -0.28
SYF2-204ENST00000476231 C21orf62-AS1Q17RA5 79 aa13.28□□□□□ -0.28
SYF2-204ENST00000476231 COL6A5A8TX70 2615 aa13.28□□□□□ -0.28
SYF2-204ENST00000476231 ANK2Q01484 3957 aa13.27□□□□□ -0.28
SYF2-204ENST00000476231 COX6CP09669 75 aa13.27□□□□□ -0.28
SYF2-204ENST00000476231 SIGMAR1Q99720 223 aa13.27□□□□□ -0.28
SYF2-204ENST00000476231 RETNQ9HD89 108 aa13.27□□□□□ -0.29
SYF2-204ENST00000476231 ICOSQ9Y6W8 199 aa13.27□□□□□ -0.29
SYF2-204ENST00000476231 H7C2G1 150 aa13.26□□□□□ -0.29
SYF2-204ENST00000476231 TRIAP1O43715 76 aa13.26□□□□□ -0.29
SYF2-204ENST00000476231 SLC25A20O43772 301 aa13.26□□□□□ -0.29
SYF2-204ENST00000476231 LINC00308Q8TCZ7 52 aa13.26□□□□□ -0.29
SYF2-204ENST00000476231 SCGB1A1P11684 91 aa13.25□□□□□ -0.29
SYF2-204ENST00000476231 LINC01620Q4KN68 170 aa13.24□□□□□ -0.29
SYF2-204ENST00000476231 C11orf68Q9H3H3 251 aaKnown RBP13.24□□□□□ -0.29
SYF2-204ENST00000476231 C9JAW5 83 aa13.23□□□□□ -0.29
SYF2-204ENST00000476231 CARD19Q96LW7 228 aa13.23□□□□□ -0.29
SYF2-204ENST00000476231 CHCHD5Q9BSY4 110 aa13.23□□□□□ -0.29
SYF2-204ENST00000476231 TRAV26-1A0A087WT03 109 aa13.22□□□□□ -0.29
SYF2-204ENST00000476231 GAGE6Q13070 117 aa13.22□□□□□ -0.29
SYF2-204ENST00000476231 TRBV10-2A0A0K0K1G8 114 aa13.21□□□□□ -0.29
SYF2-204ENST00000476231 ANKRD29Q8N6D5 301 aa13.21□□□□□ -0.29
SYF2-204ENST00000476231 MDFIQ99750 246 aa13.21□□□□□ -0.29
SYF2-204ENST00000476231 HTN3P15516 51 aa13.2□□□□□ -0.3
SYF2-204ENST00000476231 NPC2P61916 151 aa13.2□□□□□ -0.3
SYF2-204ENST00000476231 RPL13AP40429 203 aaKnown RBP13.2□□□□□ -0.3
SYF2-204ENST00000476231 KPRPQ5T749 579 aaPredicted RBP13.2□□□□□ -0.3
SYF2-204ENST00000476231 IGHV3OR16-9A0A0B4J2B5 98 aa13.19□□□□□ -0.3
SYF2-204ENST00000476231 MEIG1Q5JSS6 88 aa13.19□□□□□ -0.3
SYF2-204ENST00000476231 DAND5Q8N907 189 aa13.19□□□□□ -0.3
SYF2-204ENST00000476231 COX7B2Q8TF08 81 aa13.19□□□□□ -0.3
SYF2-204ENST00000476231 IGLV4-60A0A075B6I1 120 aa13.18□□□□□ -0.3
SYF2-204ENST00000476231 A0A1B0GUV1 79 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms