RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 TRIAP1O43715 76 aa11.75□□□□□ -0.53
TVP23B-202ENST00000476139 CDC42SE2Q9NRR3 84 aa11.75□□□□□ -0.53
TVP23B-202ENST00000476139 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.75□□□□□ -0.53
TVP23B-202ENST00000476139 TRBV6-4A0A1B0GX49 114 aa11.75□□□□□ -0.53
TVP23B-202ENST00000476139 TIRAPP58753 221 aa11.74□□□□□ -0.53
TVP23B-202ENST00000476139 CDIP1Q9H305 208 aa11.74□□□□□ -0.53
TVP23B-202ENST00000476139 PPDPFLQ8WWR9 84 aa11.74□□□□□ -0.53
TVP23B-202ENST00000476139 IGLV5-45A0A087WSX0 123 aa11.73□□□□□ -0.53
TVP23B-202ENST00000476139 CSDC2Q9Y534 153 aaKnown RBP11.73□□□□□ -0.53
TVP23B-202ENST00000476139 TEP1Q99973 2627 aaKnown RBP11.73□□□□□ -0.53
TVP23B-202ENST00000476139 IGKV3OR2-268A0A0C4DH90 116 aa11.73□□□□□ -0.53
TVP23B-202ENST00000476139 ATP6V0E2Q8NHE4 81 aa11.73□□□□□ -0.53
TVP23B-202ENST00000476139 MIAQ16674 131 aa11.72□□□□□ -0.53
TVP23B-202ENST00000476139 ZFAND6Q6FIF0 208 aa11.72□□□□□ -0.53
TVP23B-202ENST00000476139 Q9H8V8 135 aa11.72□□□□□ -0.53
TVP23B-202ENST00000476139 UBE2L6O14933 153 aa11.72□□□□□ -0.53
TVP23B-202ENST00000476139 MT-ATP8P03928 68 aa11.72□□□□□ -0.53
TVP23B-202ENST00000476139 TMEM243Q9BU79 118 aa11.72□□□□□ -0.53
TVP23B-202ENST00000476139 CLEC2BQ92478 149 aa11.71□□□□□ -0.53
TVP23B-202ENST00000476139 HERVK_113P63121 156 aa11.71□□□□□ -0.54
TVP23B-202ENST00000476139 X6R8D5 127 aa11.7□□□□□ -0.54
TVP23B-202ENST00000476139 GAGE6Q13070 117 aa11.7□□□□□ -0.54
TVP23B-202ENST00000476139 NTN5Q8WTR8 489 aaPredicted RBP11.7□□□□□ -0.54
TVP23B-202ENST00000476139 DEFB4AO15263 64 aa11.7□□□□□ -0.54
TVP23B-202ENST00000476139 XGP55808 180 aa11.7□□□□□ -0.54
TVP23B-202ENST00000476139 LINC01620Q4KN68 170 aa11.7□□□□□ -0.54
TVP23B-202ENST00000476139 SPANXDQ9BXN6 97 aa11.69□□□□□ -0.54
TVP23B-202ENST00000476139 SPANXCQ9NY87 97 aa11.69□□□□□ -0.54
TVP23B-202ENST00000476139 ICOSQ9Y6W8 199 aa11.69□□□□□ -0.54
TVP23B-202ENST00000476139 SMIM1B2RUZ4 78 aa11.69□□□□□ -0.54
TVP23B-202ENST00000476139 ATXN8Q156A1 80 aa11.68□□□□□ -0.54
TVP23B-202ENST00000476139 IGLV4-60A0A075B6I1 120 aa11.68□□□□□ -0.54
TVP23B-202ENST00000476139 RPL13AP40429 203 aaKnown RBP11.68□□□□□ -0.54
TVP23B-202ENST00000476139 IGLV5-39A0A0G2JS06 123 aa11.67□□□□□ -0.54
TVP23B-202ENST00000476139 C9orf66Q5T8R8 295 aa11.67□□□□□ -0.54
TVP23B-202ENST00000476139 TRBV6-8A0A0A6YYG3 113 aa11.67□□□□□ -0.54
TVP23B-202ENST00000476139 TEX49A0A1B0GTD5 131 aa11.67□□□□□ -0.54
TVP23B-202ENST00000476139 CIDEAO60543 219 aa11.67□□□□□ -0.54
TVP23B-202ENST00000476139 FAM19A3Q7Z5A8 133 aa11.67□□□□□ -0.54
TVP23B-202ENST00000476139 TRBV30A0A0K0K1B3 111 aa11.66□□□□□ -0.54
TVP23B-202ENST00000476139 F5H768 121 aa11.66□□□□□ -0.54
TVP23B-202ENST00000476139 NDUFA1O15239 70 aa11.66□□□□□ -0.54
TVP23B-202ENST00000476139 DEFB135Q30KP9 77 aa11.66□□□□□ -0.54
TVP23B-202ENST00000476139 FLNBO75369 2602 aaKnown RBP11.66□□□□□ -0.54
TVP23B-202ENST00000476139 KIR2DL5BQ8NHK3 375 aa11.66□□□□□ -0.54
TVP23B-202ENST00000476139 CHCHD5Q9BSY4 110 aa11.66□□□□□ -0.54
TVP23B-202ENST00000476139 A0A096LPF7 62 aa11.65□□□□□ -0.54
TVP23B-202ENST00000476139 MEIG1Q5JSS6 88 aa11.65□□□□□ -0.54
TVP23B-202ENST00000476139 PRIMA1Q86XR5 153 aa11.65□□□□□ -0.54
TVP23B-202ENST00000476139 GYPEP15421 78 aa11.64□□□□□ -0.55
TVP23B-202ENST00000476139 FAM222AQ5U5X8 452 aa11.64□□□□□ -0.55
TVP23B-202ENST00000476139 CITED1Q99966 193 aa11.64□□□□□ -0.55
TVP23B-202ENST00000476139 CIRBPQ14011 172 aaKnown RBP11.64□□□□□ -0.55
TVP23B-202ENST00000476139 LINC00612Q8N6U2 182 aa11.64□□□□□ -0.55
TVP23B-202ENST00000476139 LINC00308Q8TCZ7 52 aa11.64□□□□□ -0.55
TVP23B-202ENST00000476139 SOSTDC1Q6X4U4 206 aa11.63□□□□□ -0.55
TVP23B-202ENST00000476139 C2orf82Q6UX34 121 aa11.62□□□□□ -0.55
TVP23B-202ENST00000476139 TOMM7Q9P0U1 55 aa11.62□□□□□ -0.55
TVP23B-202ENST00000476139 H7C423 109 aa11.62□□□□□ -0.55
TVP23B-202ENST00000476139 COX6CP09669 75 aa11.62□□□□□ -0.55
TVP23B-202ENST00000476139 SCGB1A1P11684 91 aa11.61□□□□□ -0.55
TVP23B-202ENST00000476139 TRBV10-2A0A0K0K1G8 114 aa11.61□□□□□ -0.55
TVP23B-202ENST00000476139 TIMM17BO60830 172 aa11.6□□□□□ -0.55
TVP23B-202ENST00000476139 F8P00451 2351 aa11.6□□□□□ -0.55
TVP23B-202ENST00000476139 SMIM9A6NGZ8 99 aa11.59□□□□□ -0.55
TVP23B-202ENST00000476139 CKS1BP61024 79 aa11.59□□□□□ -0.55
TVP23B-202ENST00000476139 TMEM262E9PQX1 116 aa11.58□□□□□ -0.55
TVP23B-202ENST00000476139 IFITM1P13164 125 aa11.58□□□□□ -0.55
TVP23B-202ENST00000476139 PRO0255Q9UI72 69 aa11.58□□□□□ -0.55
TVP23B-202ENST00000476139 IGHV4-28A0A0C4DH34 117 aa11.57□□□□□ -0.56
TVP23B-202ENST00000476139 IGHV3OR16-9A0A0B4J2B5 98 aa11.56□□□□□ -0.56
TVP23B-202ENST00000476139 C5orf38Q86SI9 138 aa11.56□□□□□ -0.56
TVP23B-202ENST00000476139 UBE2WQ96B02 151 aa11.56□□□□□ -0.56
TVP23B-202ENST00000476139 LST1O00453 97 aa11.55□□□□□ -0.56
TVP23B-202ENST00000476139 PAX4O43316 350 aa11.55□□□□□ -0.56
TVP23B-202ENST00000476139 CELA1Q9UNI1 258 aa11.55□□□□□ -0.56
TVP23B-202ENST00000476139 FBN1P35555 2871 aaKnown RBP11.55□□□□□ -0.56
TVP23B-202ENST00000476139 CLPSL2Q6UWE3 100 aa11.55□□□□□ -0.56
TVP23B-202ENST00000476139 APOC4P55056 127 aa11.55□□□□□ -0.56
TVP23B-202ENST00000476139 C11orf68Q9H3H3 251 aaKnown RBP11.55□□□□□ -0.56
TVP23B-202ENST00000476139 PKD1L1Q8TDX9 2849 aa11.55□□□□□ -0.56
TVP23B-202ENST00000476139 LYRM9A8MSI8 78 aa11.54□□□□□ -0.56
TVP23B-202ENST00000476139 WFDC9Q8NEX5 89 aa11.54□□□□□ -0.56
TVP23B-202ENST00000476139 LINC00959A0A1B0GUT2 108 aa11.53□□□□□ -0.56
TVP23B-202ENST00000476139 COX7B2Q8TF08 81 aa11.53□□□□□ -0.56
TVP23B-202ENST00000476139 RNF183Q96D59 192 aa11.53□□□□□ -0.56
TVP23B-202ENST00000476139 A0A1B0GV72 72 aa11.53□□□□□ -0.56
TVP23B-202ENST00000476139 IGHV4-30-4P0DP06 118 aa11.53□□□□□ -0.56
TVP23B-202ENST00000476139 Q8N3U1 123 aa11.53□□□□□ -0.56
TVP23B-202ENST00000476139 TRAV8-4A0A0B4J246 113 aa11.52□□□□□ -0.56
TVP23B-202ENST00000476139 ANK2Q01484 3957 aa11.52□□□□□ -0.57
TVP23B-202ENST00000476139 XCL1P47992 114 aa11.52□□□□□ -0.57
TVP23B-202ENST00000476139 MIR7-3HGQ8N6C7 128 aa11.52□□□□□ -0.57
TVP23B-202ENST00000476139 Q8NAQ8 132 aa11.52□□□□□ -0.57
TVP23B-202ENST00000476139 M0QXV9 152 aa11.51□□□□□ -0.57
TVP23B-202ENST00000476139 DAD1P61803 113 aa11.51□□□□□ -0.57
TVP23B-202ENST00000476139 HERV-K104P63124 156 aa11.51□□□□□ -0.57
TVP23B-202ENST00000476139 TRAV26-1A0A087WT03 109 aa11.5□□□□□ -0.57
TVP23B-202ENST00000476139 PFN2P35080 140 aa11.5□□□□□ -0.57
TVP23B-202ENST00000476139 OXLD1Q5BKU9 147 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms