RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 FAM19A3Q7Z5A8 133 aa4.85□□□□□ -1.63
SHQ1-207ENST00000475558 C12orf57Q99622 126 aa4.85□□□□□ -1.63
SHQ1-207ENST00000475558 VAMP8Q9BV40 100 aa4.85□□□□□ -1.63
SHQ1-207ENST00000475558 CDC42SE2Q9NRR3 84 aa4.85□□□□□ -1.63
SHQ1-207ENST00000475558 IGLV4-3A0A075B6K6 122 aa4.84□□□□□ -1.63
SHQ1-207ENST00000475558 TRAV8-4A0A0B4J246 113 aa4.84□□□□□ -1.63
SHQ1-207ENST00000475558 TINCRA0A1B0GVN0 87 aa4.84□□□□□ -1.63
SHQ1-207ENST00000475558 H3BRM9 83 aa4.84□□□□□ -1.63
SHQ1-207ENST00000475558 RPL39P62891 51 aaKnown RBP4.84□□□□□ -1.63
SHQ1-207ENST00000475558 HERVK_113P63121 156 aa4.84□□□□□ -1.63
SHQ1-207ENST00000475558 SS18Q15532 418 aa4.84□□□□□ -1.63
SHQ1-207ENST00000475558 NFE4Q86UQ8 179 aa4.84□□□□□ -1.63
SHQ1-207ENST00000475558 PMCHL2Q9BQD1 86 aa4.84□□□□□ -1.63
SHQ1-207ENST00000475558 GEMIN7Q9H840 131 aaKnown RBP4.84□□□□□ -1.63
SHQ1-207ENST00000475558 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.83□□□□□ -1.64
SHQ1-207ENST00000475558 IGKV2-29A2NJV5 120 aaPredicted RBP4.83□□□□□ -1.64
SHQ1-207ENST00000475558 C11orf86A6NJI1 115 aa4.83□□□□□ -1.64
SHQ1-207ENST00000475558 IGLL5B9A064 214 aa4.83□□□□□ -1.64
SHQ1-207ENST00000475558 TSTD3H0UI37 97 aa4.83□□□□□ -1.64
SHQ1-207ENST00000475558 GAGE6Q13070 117 aa4.83□□□□□ -1.64
SHQ1-207ENST00000475558 LINC01561Q8N1V8 128 aa4.83□□□□□ -1.64
SHQ1-207ENST00000475558 H0Y8G0 127 aa4.82□□□□□ -1.64
SHQ1-207ENST00000475558 IGLC3P0DOY3 106 aa4.82□□□□□ -1.64
SHQ1-207ENST00000475558 RBX1P62877 108 aa4.82□□□□□ -1.64
SHQ1-207ENST00000475558 ESRGQ1W209 222 aa4.82□□□□□ -1.64
SHQ1-207ENST00000475558 LINC00336Q6ZUF6 198 aa4.82□□□□□ -1.64
SHQ1-207ENST00000475558 LINC00173Q6ZV60 143 aa4.82□□□□□ -1.64
SHQ1-207ENST00000475558 C10orf126Q8N4M7 172 aa4.82□□□□□ -1.64
SHQ1-207ENST00000475558 UPK3BQ9BT76 320 aa4.82□□□□□ -1.64
SHQ1-207ENST00000475558 MRPL35Q9NZE8 188 aaKnown RBP4.82□□□□□ -1.64
SHQ1-207ENST00000475558 COX11Q9Y6N1 276 aa4.82□□□□□ -1.64
SHQ1-207ENST00000475558 PKHD1P08F94 4074 aa4.82□□□□□ -1.64
SHQ1-207ENST00000475558 DLEU1O43261 78 aa4.81□□□□□ -1.64
SHQ1-207ENST00000475558 UBE2D1P51668 147 aa4.81□□□□□ -1.64
SHQ1-207ENST00000475558 LINC01556Q5JQF7 62 aa4.81□□□□□ -1.64
SHQ1-207ENST00000475558 SFTA2Q6UW10 78 aa4.81□□□□□ -1.64
SHQ1-207ENST00000475558 Q8N976 141 aa4.81□□□□□ -1.64
SHQ1-207ENST00000475558 PLEKHB2Q96CS7 222 aa4.81□□□□□ -1.64
SHQ1-207ENST00000475558 RMI2Q96E14 147 aa4.81□□□□□ -1.64
SHQ1-207ENST00000475558 KRTAP9-3Q9BYQ3 159 aa4.81□□□□□ -1.64
SHQ1-207ENST00000475558 MRPS16Q9Y3D3 137 aaKnown RBP4.81□□□□□ -1.64
SHQ1-207ENST00000475558 TRAV8-3A0A0A6YYJ7 113 aa4.8□□□□□ -1.64
SHQ1-207ENST00000475558 LINC00587B1AMM8 73 aa4.8□□□□□ -1.64
SHQ1-207ENST00000475558 SIVA1O15304 175 aa4.8□□□□□ -1.64
SHQ1-207ENST00000475558 DNAH10OSP0CZ25 163 aa4.8□□□□□ -1.64
SHQ1-207ENST00000475558 GCSHP23434 173 aa4.8□□□□□ -1.64
SHQ1-207ENST00000475558 MIAQ16674 131 aa4.8□□□□□ -1.64
SHQ1-207ENST00000475558 TMEM170BQ5T4T1 132 aa4.8□□□□□ -1.64
SHQ1-207ENST00000475558 ZC2HC1BQ5TFG8 222 aa4.8□□□□□ -1.64
SHQ1-207ENST00000475558 BOD1L2Q8IYS8 172 aa4.8□□□□□ -1.64
SHQ1-207ENST00000475558 DEFB104AQ8WTQ1 72 aa4.8□□□□□ -1.64
SHQ1-207ENST00000475558 ABCA13Q86UQ4 5058 aa4.8□□□□□ -1.64
SHQ1-207ENST00000475558 DYNC1H1Q14204 4646 aaKnown RBP4.8□□□□□ -1.64
SHQ1-207ENST00000475558 FAT2Q9NYQ8 4349 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 IGLV5-45A0A087WSX0 123 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 TRAV13-1A0A0B4J241 112 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 LINC00959A0A1B0GUT2 108 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 E9PLD3 99 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 APOMO95445 188 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 CRPP02741 224 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 ANGP03950 147 aaKnown RBP4.79□□□□□ -1.64
SHQ1-207ENST00000475558 NMUP48645 174 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 REG3AQ06141 175 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 SPATA45Q537H7 98 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 CD164L2Q6UWJ8 174 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 OPRPNQ99935 248 aaPredicted RBP4.79□□□□□ -1.64
SHQ1-207ENST00000475558 CHAC1Q9BUX1 264 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 PRR34Q9NV39 138 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 UQCR10Q9UDW1 63 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 APLNQ9ULZ1 77 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 DNAH17Q9UFH2 4485 aa4.79□□□□□ -1.64
SHQ1-207ENST00000475558 DNAH2Q9P225 4427 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 IGLV4-69A0A075B6H9 119 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 IGLV4-60A0A075B6I1 120 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 A0A0J9YXV3 536 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 A0A1B0GVY2 172 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 F8WDY8 70 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 LEPROTO15243 131 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 MPV17L2Q567V2 206 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 LINC00242Q5T6M2 205 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 SLC25A34Q6PIV7 304 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 Q6ZUT4 128 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 LINC00269Q8N2A0 174 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 LINC00469Q8N7U9 141 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 FAM104AQ969W3 186 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 MIEN1Q9BRT3 115 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 TM2D2Q9BX73 214 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 Q9H8V8 135 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 PAM16Q9Y3D7 125 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 DNAH11Q96DT5 4516 aa4.78□□□□□ -1.64
SHQ1-207ENST00000475558 A0A087WZ39 114 aa4.77□□□□□ -1.65
SHQ1-207ENST00000475558 IGHV1-58A0A0C4DH39 117 aa4.77□□□□□ -1.65
SHQ1-207ENST00000475558 TMEM223A0PJW6 202 aa4.77□□□□□ -1.65
SHQ1-207ENST00000475558 IBA57-AS1B1ANH7 110 aa4.77□□□□□ -1.65
SHQ1-207ENST00000475558 COX8AP10176 69 aa4.77□□□□□ -1.65
SHQ1-207ENST00000475558 LGALS3P17931 250 aaKnown RBP4.77□□□□□ -1.65
SHQ1-207ENST00000475558 CIRBPQ14011 172 aaKnown RBP4.77□□□□□ -1.65
SHQ1-207ENST00000475558 TTC32Q5I0X7 151 aa4.77□□□□□ -1.65
SHQ1-207ENST00000475558 UBE2DNLQ8IWF7 75 aa4.77□□□□□ -1.65
SHQ1-207ENST00000475558 STPG4Q8N801 248 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms