RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 LCE2DQ5TA82 110 aaPredicted RBP10.54□□□□□ -0.72
CPSF3-203ENST00000475482 RBX1P62877 108 aa10.53□□□□□ -0.72
CPSF3-203ENST00000475482 CDPF1Q6NVV7 123 aa10.53□□□□□ -0.72
CPSF3-203ENST00000475482 NFE4Q86UQ8 179 aa10.53□□□□□ -0.72
CPSF3-203ENST00000475482 WFDC10BQ8IUB3 73 aa10.53□□□□□ -0.72
CPSF3-203ENST00000475482 PAM16Q9Y3D7 125 aa10.53□□□□□ -0.72
CPSF3-203ENST00000475482 PCLOQ9Y6V0 5065 aa10.53□□□□□ -0.72
CPSF3-203ENST00000475482 TSTD3H0UI37 97 aa10.52□□□□□ -0.73
CPSF3-203ENST00000475482 CCL25O15444 150 aa10.52□□□□□ -0.73
CPSF3-203ENST00000475482 CDK2AP2O75956 126 aa10.52□□□□□ -0.73
CPSF3-203ENST00000475482 IGLC3P0DOY3 106 aa10.52□□□□□ -0.73
CPSF3-203ENST00000475482 HERVK_113P61574 105 aa10.52□□□□□ -0.73
CPSF3-203ENST00000475482 SPATA45Q537H7 98 aa10.52□□□□□ -0.73
CPSF3-203ENST00000475482 FAM104AQ969W3 186 aa10.52□□□□□ -0.73
CPSF3-203ENST00000475482 GEMIN7Q9H840 131 aaKnown RBP10.52□□□□□ -0.73
CPSF3-203ENST00000475482 IGLV4-69A0A075B6H9 119 aa10.51□□□□□ -0.73
CPSF3-203ENST00000475482 TINCRA0A1B0GVN0 87 aa10.51□□□□□ -0.73
CPSF3-203ENST00000475482 UBE2D1P51668 147 aa10.51□□□□□ -0.73
CPSF3-203ENST00000475482 KRTAP10-2P60368 255 aa10.51□□□□□ -0.73
CPSF3-203ENST00000475482 MPV17L2Q567V2 206 aa10.51□□□□□ -0.73
CPSF3-203ENST00000475482 RNASE13Q5GAN3 156 aaKnown RBP10.51□□□□□ -0.73
CPSF3-203ENST00000475482 ZC2HC1BQ5TFG8 222 aa10.51□□□□□ -0.73
CPSF3-203ENST00000475482 CHAC1Q9BUX1 264 aa10.51□□□□□ -0.73
CPSF3-203ENST00000475482 IGLV4-60A0A075B6I1 120 aa10.5□□□□□ -0.73
CPSF3-203ENST00000475482 HERVK_113P63121 156 aa10.5□□□□□ -0.73
CPSF3-203ENST00000475482 FAM19A3Q7Z5A8 133 aa10.5□□□□□ -0.73
CPSF3-203ENST00000475482 A0A0J9YXV3 536 aa10.49□□□□□ -0.73
CPSF3-203ENST00000475482 hDV102S1A0JD36 115 aa10.49□□□□□ -0.73
CPSF3-203ENST00000475482 C11orf86A6NJI1 115 aa10.49□□□□□ -0.73
CPSF3-203ENST00000475482 ANGP03950 147 aaKnown RBP10.49□□□□□ -0.73
CPSF3-203ENST00000475482 TMEM170BQ5T4T1 132 aa10.49□□□□□ -0.73
CPSF3-203ENST00000475482 TRAV13-1A0A0B4J241 112 aa10.48□□□□□ -0.73
CPSF3-203ENST00000475482 H3BRM9 83 aa10.48□□□□□ -0.73
CPSF3-203ENST00000475482 SS18Q15532 418 aa10.48□□□□□ -0.73
CPSF3-203ENST00000475482 LINC01556Q5JQF7 62 aa10.47□□□□□ -0.73
CPSF3-203ENST00000475482 C10orf126Q8N4M7 172 aa10.47□□□□□ -0.73
CPSF3-203ENST00000475482 STPG4Q8N801 248 aa10.47□□□□□ -0.73
CPSF3-203ENST00000475482 ABCA13Q86UQ4 5058 aa10.46□□□□□ -0.73
CPSF3-203ENST00000475482 MAJINQ3KP22 176 aa10.46□□□□□ -0.73
CPSF3-203ENST00000475482 KRTAP4-5Q9BYR2 181 aa10.46□□□□□ -0.73
CPSF3-203ENST00000475482 ZNF22P17026 224 aaPredicted RBP10.45□□□□□ -0.74
CPSF3-203ENST00000475482 REG3AQ06141 175 aa10.45□□□□□ -0.74
CPSF3-203ENST00000475482 LINC00242Q5T6M2 205 aa10.45□□□□□ -0.74
CPSF3-203ENST00000475482 LINC00269Q8N2A0 174 aa10.45□□□□□ -0.74
CPSF3-203ENST00000475482 LINC00469Q8N7U9 141 aa10.45□□□□□ -0.74
CPSF3-203ENST00000475482 PGPEP1Q9NXJ5 209 aa10.45□□□□□ -0.74
CPSF3-203ENST00000475482 IGLV5-45A0A087WSX0 123 aa10.44□□□□□ -0.74
CPSF3-203ENST00000475482 A0A087WTM6 91 aa10.44□□□□□ -0.74
CPSF3-203ENST00000475482 IGKV3OR2-268A0A0C4DH90 116 aa10.44□□□□□ -0.74
CPSF3-203ENST00000475482 LINC00959A0A1B0GUT2 108 aa10.44□□□□□ -0.74
CPSF3-203ENST00000475482 E9PLD3 99 aa10.44□□□□□ -0.74
CPSF3-203ENST00000475482 CRPP02741 224 aa10.44□□□□□ -0.74
CPSF3-203ENST00000475482 UQCR10Q9UDW1 63 aa10.44□□□□□ -0.74
CPSF3-203ENST00000475482 IBA57-AS1B1ANH7 110 aa10.43□□□□□ -0.74
CPSF3-203ENST00000475482 IGHV3-30P01768 117 aa10.43□□□□□ -0.74
CPSF3-203ENST00000475482 IGHV3-33P01772 117 aa10.43□□□□□ -0.74
CPSF3-203ENST00000475482 IGHV3-30-3P0DP02 117 aa10.43□□□□□ -0.74
CPSF3-203ENST00000475482 IGHV3-30-5P0DP03 117 aa10.43□□□□□ -0.74
CPSF3-203ENST00000475482 NMUP48645 174 aa10.43□□□□□ -0.74
CPSF3-203ENST00000475482 ANKRD39Q53RE8 183 aa10.43□□□□□ -0.74
CPSF3-203ENST00000475482 PRO1933Q9H354 126 aa10.43□□□□□ -0.74
CPSF3-203ENST00000475482 TRAV8-4A0A0B4J246 113 aa10.42□□□□□ -0.74
CPSF3-203ENST00000475482 TMEM223A0PJW6 202 aa10.42□□□□□ -0.74
CPSF3-203ENST00000475482 SLC25A34Q6PIV7 304 aa10.42□□□□□ -0.74
CPSF3-203ENST00000475482 PRR34Q9NV39 138 aa10.42□□□□□ -0.74
CPSF3-203ENST00000475482 KLK12Q9UKR0 248 aa10.42□□□□□ -0.74
CPSF3-203ENST00000475482 EREGO14944 169 aa10.41□□□□□ -0.74
CPSF3-203ENST00000475482 COX8AP10176 69 aa10.41□□□□□ -0.74
CPSF3-203ENST00000475482 PLEKHB2Q96CS7 222 aa10.41□□□□□ -0.74
CPSF3-203ENST00000475482 MIEN1Q9BRT3 115 aa10.41□□□□□ -0.74
CPSF3-203ENST00000475482 DLEU1O43261 78 aa10.4□□□□□ -0.74
CPSF3-203ENST00000475482 MIAQ16674 131 aa10.4□□□□□ -0.74
CPSF3-203ENST00000475482 C14orf144Q96I85 54 aa10.4□□□□□ -0.74
CPSF3-203ENST00000475482 CDKN2A-AS1Q9UH64 79 aa10.4□□□□□ -0.74
CPSF3-203ENST00000475482 LEPROTO15243 131 aa10.39□□□□□ -0.75
CPSF3-203ENST00000475482 LGALS3P17931 250 aaKnown RBP10.39□□□□□ -0.75
CPSF3-203ENST00000475482 COX6A2Q02221 97 aa10.39□□□□□ -0.75
CPSF3-203ENST00000475482 CLPSL2Q6UWE3 100 aa10.39□□□□□ -0.75
CPSF3-203ENST00000475482 LINC01561Q8N1V8 128 aa10.39□□□□□ -0.75
CPSF3-203ENST00000475482 IGHV1-58A0A0C4DH39 117 aa10.38□□□□□ -0.75
CPSF3-203ENST00000475482 LRCOL1A6NCL2 159 aa10.38□□□□□ -0.75
CPSF3-203ENST00000475482 CD164L2Q6UWJ8 174 aa10.38□□□□□ -0.75
CPSF3-203ENST00000475482 Q8N1X5 172 aa10.38□□□□□ -0.75
CPSF3-203ENST00000475482 Q8N3U1 123 aa10.38□□□□□ -0.75
CPSF3-203ENST00000475482 UBE2WQ96B02 151 aa10.38□□□□□ -0.75
CPSF3-203ENST00000475482 IGKV2D-26A0A0A0MRZ7 120 aa10.37□□□□□ -0.75
CPSF3-203ENST00000475482 IGHV3OR16-9A0A0B4J2B5 98 aa10.37□□□□□ -0.75
CPSF3-203ENST00000475482 PCP4L1A6NKN8 68 aa10.37□□□□□ -0.75
CPSF3-203ENST00000475482 FUSP35637 526 aaKnown RBP eCLIP10.37□□□□□ -0.75
CPSF3-203ENST00000475482 XCL1P47992 114 aa10.37□□□□□ -0.75
CPSF3-203ENST00000475482 BOD1L2Q8IYS8 172 aa10.37□□□□□ -0.75
CPSF3-203ENST00000475482 MAPKAPK5-AS1Q8N8E1 139 aa10.37□□□□□ -0.75
CPSF3-203ENST00000475482 CHCHD10Q8WYQ3 142 aaPredicted RBP10.37□□□□□ -0.75
CPSF3-203ENST00000475482 A0A087WZ39 114 aa10.36□□□□□ -0.75
CPSF3-203ENST00000475482 TRAV8-3A0A0A6YYJ7 113 aa10.36□□□□□ -0.75
CPSF3-203ENST00000475482 J3QQQ9 107 aa10.36□□□□□ -0.75
CPSF3-203ENST00000475482 SPINK8P0C7L1 97 aa10.36□□□□□ -0.75
CPSF3-203ENST00000475482 DDTP30046 118 aa10.36□□□□□ -0.75
CPSF3-203ENST00000475482 ENHOQ6UWT2 76 aa10.36□□□□□ -0.75
CPSF3-203ENST00000475482 COX7A2LO14548 114 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms