RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 DNAH2Q9P225 4427 aa4.51□□□□□ -1.69
ATG4A-207ENST00000474825 A0A0J9YXV3 536 aa4.51□□□□□ -1.69
ATG4A-207ENST00000474825 HSBP1L1C9JCN9 74 aa4.51□□□□□ -1.69
ATG4A-207ENST00000474825 E9PLD3 99 aa4.51□□□□□ -1.69
ATG4A-207ENST00000474825 DLEU1O43261 78 aa4.51□□□□□ -1.69
ATG4A-207ENST00000474825 ZNF22P17026 224 aaPredicted RBP4.51□□□□□ -1.69
ATG4A-207ENST00000474825 SEC11AP67812 179 aa4.51□□□□□ -1.69
ATG4A-207ENST00000474825 MPV17L2Q567V2 206 aa4.51□□□□□ -1.69
ATG4A-207ENST00000474825 LINC00242Q5T6M2 205 aa4.51□□□□□ -1.69
ATG4A-207ENST00000474825 AMMECR1LQ6DCA0 310 aa4.51□□□□□ -1.69
ATG4A-207ENST00000474825 STPG4Q8N801 248 aa4.51□□□□□ -1.69
ATG4A-207ENST00000474825 C2orf88Q9BSF0 95 aa4.51□□□□□ -1.69
ATG4A-207ENST00000474825 PRR34Q9NV39 138 aa4.51□□□□□ -1.69
ATG4A-207ENST00000474825 TMEM223A0PJW6 202 aa4.5□□□□□ -1.69
ATG4A-207ENST00000474825 TSTD3H0UI37 97 aa4.5□□□□□ -1.69
ATG4A-207ENST00000474825 C3orf84H3BNL1 204 aa4.5□□□□□ -1.69
ATG4A-207ENST00000474825 COX8AP10176 69 aa4.5□□□□□ -1.69
ATG4A-207ENST00000474825 TCTAP57738 103 aa4.5□□□□□ -1.69
ATG4A-207ENST00000474825 KRTAP10-2P60368 255 aa4.5□□□□□ -1.69
ATG4A-207ENST00000474825 MIEN1Q9BRT3 115 aa4.5□□□□□ -1.69
ATG4A-207ENST00000474825 UPK3BQ9BT76 320 aa4.5□□□□□ -1.69
ATG4A-207ENST00000474825 CHAC1Q9BUX1 264 aa4.5□□□□□ -1.69
ATG4A-207ENST00000474825 MRPS16Q9Y3D3 137 aaKnown RBP4.5□□□□□ -1.69
ATG4A-207ENST00000474825 IGKV2D-26A0A0A0MRZ7 120 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 TRAV8-6A0A0B4J262 113 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 IGHV3OR16-9A0A0B4J2B5 98 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 IGLV5-39A0A0G2JS06 123 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 LINC00959A0A1B0GUT2 108 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 TMEM262E9PQX1 116 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 EREGO14944 169 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 DNAH10OSP0CZ25 163 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 HERVK_113P63121 156 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 COX6A2Q02221 97 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 RNASE13Q5GAN3 156 aaKnown RBP4.49□□□□□ -1.69
ATG4A-207ENST00000474825 LINC01556Q5JQF7 62 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 BOD1L2Q8IYS8 172 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 LINC01561Q8N1V8 128 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 PRO1933Q9H354 126 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 UQCR10Q9UDW1 63 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 APLNQ9ULZ1 77 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 DNAH10Q8IVF4 4471 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 LYSTQ99698 3801 aa4.49□□□□□ -1.69
ATG4A-207ENST00000474825 SACSQ9NZJ4 4579 aa4.48□□□□□ -1.69
ATG4A-207ENST00000474825 ALMS1Q8TCU4 4167 aa4.48□□□□□ -1.69
ATG4A-207ENST00000474825 SIVA1O15304 175 aa4.48□□□□□ -1.69
ATG4A-207ENST00000474825 DDTP30046 118 aa4.48□□□□□ -1.69
ATG4A-207ENST00000474825 WFDC10BQ8IUB3 73 aa4.48□□□□□ -1.69
ATG4A-207ENST00000474825 LINC00588Q9Y4M8 146 aa4.48□□□□□ -1.69
ATG4A-207ENST00000474825 DNAH17Q9UFH2 4485 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 A0A087WZ39 114 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 TRAV13-1A0A0B4J241 112 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 IGHV1-58A0A0C4DH39 117 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 NUPR2A6NF83 97 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 IGLL5B9A064 214 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 K7EP13 123 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 LEPROTO15243 131 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 HERVK_113P61574 105 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 REG3AQ06141 175 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 TMEM170BQ5T4T1 132 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 SLC25A34Q6PIV7 304 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 ENHOQ6UWT2 76 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 PCP2Q8IVA1 136 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 LINC00269Q8N2A0 174 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 MUC7Q8TAX7 377 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 C14orf144Q96I85 54 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 GEMIN7Q9H840 131 aaKnown RBP4.47□□□□□ -1.69
ATG4A-207ENST00000474825 CDKN2A-AS1Q9UH64 79 aa4.47□□□□□ -1.69
ATG4A-207ENST00000474825 TRAV8-4A0A0B4J246 113 aa4.46□□□□□ -1.7
ATG4A-207ENST00000474825 SMIM1B2RUZ4 78 aa4.46□□□□□ -1.7
ATG4A-207ENST00000474825 H3BRM9 83 aa4.46□□□□□ -1.7
ATG4A-207ENST00000474825 IGHV3-30-3P0DP02 117 aa4.46□□□□□ -1.7
ATG4A-207ENST00000474825 CCL18P55774 89 aa4.46□□□□□ -1.7
ATG4A-207ENST00000474825 TSPEAR-AS2P59090 65 aa4.46□□□□□ -1.7
ATG4A-207ENST00000474825 SS18Q15532 418 aa4.46□□□□□ -1.7
ATG4A-207ENST00000474825 KRTAP26-1Q6PEX3 210 aa4.46□□□□□ -1.7
ATG4A-207ENST00000474825 CD164L2Q6UWJ8 174 aa4.46□□□□□ -1.7
ATG4A-207ENST00000474825 C2orf91Q6ZV80 131 aa4.46□□□□□ -1.7
ATG4A-207ENST00000474825 MAPKAPK5-AS1Q8N8E1 139 aa4.46□□□□□ -1.7
ATG4A-207ENST00000474825 PLEKHB2Q96CS7 222 aa4.46□□□□□ -1.7
ATG4A-207ENST00000474825 HIGD1BQ9P298 99 aa4.46□□□□□ -1.7
ATG4A-207ENST00000474825 KLK5Q9Y337 293 aaPredicted RBP4.46□□□□□ -1.7
ATG4A-207ENST00000474825 MYMXA0A1B0GTQ4 84 aa4.45□□□□□ -1.7
ATG4A-207ENST00000474825 IBA57-AS1B1ANH7 110 aa4.45□□□□□ -1.7
ATG4A-207ENST00000474825 J3QQQ9 107 aa4.45□□□□□ -1.7
ATG4A-207ENST00000474825 ANGP03950 147 aaKnown RBP4.45□□□□□ -1.7
ATG4A-207ENST00000474825 NMUP48645 174 aa4.45□□□□□ -1.7
ATG4A-207ENST00000474825 MIAQ16674 131 aa4.45□□□□□ -1.7
ATG4A-207ENST00000474825 CASC10Q5T4H9 136 aa4.45□□□□□ -1.7
ATG4A-207ENST00000474825 TRAV8-3A0A0A6YYJ7 113 aa4.44□□□□□ -1.7
ATG4A-207ENST00000474825 FOXI1Q12951 378 aa4.44□□□□□ -1.7
ATG4A-207ENST00000474825 ZFAND6Q6FIF0 208 aa4.44□□□□□ -1.7
ATG4A-207ENST00000474825 CHCHD10Q8WYQ3 142 aaPredicted RBP4.44□□□□□ -1.7
ATG4A-207ENST00000474825 TTTY13Q9BZ97 58 aa4.44□□□□□ -1.7
ATG4A-207ENST00000474825 KLK12Q9UKR0 248 aa4.44□□□□□ -1.7
ATG4A-207ENST00000474825 DNAH11Q96DT5 4516 aa4.44□□□□□ -1.7
ATG4A-207ENST00000474825 KMT2AQ03164 3969 aa4.43□□□□□ -1.7
ATG4A-207ENST00000474825 IGHV3-30P01768 117 aa4.43□□□□□ -1.7
ATG4A-207ENST00000474825 IGHV3-33P01772 117 aa4.43□□□□□ -1.7
ATG4A-207ENST00000474825 SPINK8P0C7L1 97 aa4.43□□□□□ -1.7
ATG4A-207ENST00000474825 IGHV3-30-5P0DP03 117 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms