RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 TINCRA0A1B0GVN0 87 aa8.96□□□□□ -0.98
BRAT1-205ENST00000473879 HERVK_113P63121 156 aa8.96□□□□□ -0.98
BRAT1-205ENST00000473879 REG3AQ06141 175 aa8.96□□□□□ -0.98
BRAT1-205ENST00000473879 SS18Q15532 418 aa8.96□□□□□ -0.98
BRAT1-205ENST00000473879 TTC32Q5I0X7 151 aa8.96□□□□□ -0.98
BRAT1-205ENST00000473879 FAM19A3Q7Z5A8 133 aa8.96□□□□□ -0.98
BRAT1-205ENST00000473879 NFE4Q86UQ8 179 aa8.96□□□□□ -0.98
BRAT1-205ENST00000473879 C6orf223Q8N319 242 aa8.96□□□□□ -0.98
BRAT1-205ENST00000473879 C10orf126Q8N4M7 172 aa8.96□□□□□ -0.98
BRAT1-205ENST00000473879 CHAC1Q9BUX1 264 aa8.96□□□□□ -0.98
BRAT1-205ENST00000473879 KLK12Q9UKR0 248 aa8.96□□□□□ -0.98
BRAT1-205ENST00000473879 DYNC1H1Q14204 4646 aaKnown RBP8.95□□□□□ -0.98
BRAT1-205ENST00000473879 TRAV9-2A0A087WT02 112 aa8.95□□□□□ -0.98
BRAT1-205ENST00000473879 A0A0J9YXV3 536 aa8.95□□□□□ -0.98
BRAT1-205ENST00000473879 LINC00959A0A1B0GUT2 108 aa8.95□□□□□ -0.98
BRAT1-205ENST00000473879 HSBP1L1C9JCN9 74 aa8.95□□□□□ -0.98
BRAT1-205ENST00000473879 K7EP13 123 aa8.95□□□□□ -0.98
BRAT1-205ENST00000473879 CLPSL2Q6UWE3 100 aa8.95□□□□□ -0.98
BRAT1-205ENST00000473879 GEMIN7Q9H840 131 aaKnown RBP8.95□□□□□ -0.98
BRAT1-205ENST00000473879 PRR34Q9NV39 138 aa8.95□□□□□ -0.98
BRAT1-205ENST00000473879 KIAA1109Q2LD37 5005 aa8.94□□□□□ -0.98
BRAT1-205ENST00000473879 DNAH5Q8TE73 4624 aa8.94□□□□□ -0.98
BRAT1-205ENST00000473879 C11orf86A6NJI1 115 aa8.94□□□□□ -0.98
BRAT1-205ENST00000473879 S100A12P80511 92 aa8.94□□□□□ -0.98
BRAT1-205ENST00000473879 ATOH7Q8N100 152 aa8.94□□□□□ -0.98
BRAT1-205ENST00000473879 MIAQ16674 131 aa8.93□□□□□ -0.98
BRAT1-205ENST00000473879 LINC00242Q5T6M2 205 aa8.93□□□□□ -0.98
BRAT1-205ENST00000473879 UBE2WQ96B02 151 aa8.93□□□□□ -0.98
BRAT1-205ENST00000473879 VAMP8Q9BV40 100 aa8.93□□□□□ -0.98
BRAT1-205ENST00000473879 KRTAP17-1Q9BYP8 105 aa8.93□□□□□ -0.98
BRAT1-205ENST00000473879 KRTAP1-5Q9BYS1 174 aa8.93□□□□□ -0.98
BRAT1-205ENST00000473879 TRAV8-4A0A0B4J246 113 aa8.92□□□□□ -0.98
BRAT1-205ENST00000473879 H3BRM9 83 aa8.92□□□□□ -0.98
BRAT1-205ENST00000473879 HERVK_113P61574 105 aa8.92□□□□□ -0.98
BRAT1-205ENST00000473879 TMEM170BQ5T4T1 132 aa8.92□□□□□ -0.98
BRAT1-205ENST00000473879 LINC00469Q8N7U9 141 aa8.92□□□□□ -0.98
BRAT1-205ENST00000473879 C12orf57Q99622 126 aa8.92□□□□□ -0.98
BRAT1-205ENST00000473879 IGLV5-45A0A087WSX0 123 aa8.91□□□□□ -0.98
BRAT1-205ENST00000473879 IBA57-AS1B1ANH7 110 aa8.91□□□□□ -0.98
BRAT1-205ENST00000473879 ZNF22P17026 224 aaPredicted RBP8.91□□□□□ -0.98
BRAT1-205ENST00000473879 ENHOQ6UWT2 76 aa8.91□□□□□ -0.98
BRAT1-205ENST00000473879 TRAV8-3A0A0A6YYJ7 113 aa8.9□□□□□ -0.98
BRAT1-205ENST00000473879 TNP2Q05952 138 aa8.9□□□□□ -0.98
BRAT1-205ENST00000473879 CDPF1Q6NVV7 123 aa8.9□□□□□ -0.98
BRAT1-205ENST00000473879 LINC00518Q8N0U6 118 aa8.9□□□□□ -0.98
BRAT1-205ENST00000473879 CHCHD10Q8WYQ3 142 aaPredicted RBP8.9□□□□□ -0.98
BRAT1-205ENST00000473879 hDV102S1A0JD36 115 aa8.89□□□□□ -0.99
BRAT1-205ENST00000473879 XCL1P47992 114 aa8.89□□□□□ -0.99
BRAT1-205ENST00000473879 CD164L2Q6UWJ8 174 aa8.89□□□□□ -0.99
BRAT1-205ENST00000473879 RMI2Q96E14 147 aa8.89□□□□□ -0.99
BRAT1-205ENST00000473879 CDKN2A-AS1Q9UH64 79 aa8.89□□□□□ -0.99
BRAT1-205ENST00000473879 IGLV10-54A0A075B6I4 117 aa8.88□□□□□ -0.99
BRAT1-205ENST00000473879 COX6A2Q02221 97 aa8.88□□□□□ -0.99
BRAT1-205ENST00000473879 SPATA45Q537H7 98 aa8.88□□□□□ -0.99
BRAT1-205ENST00000473879 C1orf43Q9BWL3 253 aa8.88□□□□□ -0.99
BRAT1-205ENST00000473879 PAM16Q9Y3D7 125 aa8.88□□□□□ -0.99
BRAT1-205ENST00000473879 PCLOQ9Y6V0 5065 aa8.88□□□□□ -0.99
BRAT1-205ENST00000473879 LRP1BQ9NZR2 4599 aa8.87□□□□□ -0.99
BRAT1-205ENST00000473879 IGHV3OR16-9A0A0B4J2B5 98 aa8.87□□□□□ -0.99
BRAT1-205ENST00000473879 TMEM223A0PJW6 202 aa8.87□□□□□ -0.99
BRAT1-205ENST00000473879 MAJINQ3KP22 176 aa8.87□□□□□ -0.99
BRAT1-205ENST00000473879 LINC01561Q8N1V8 128 aa8.87□□□□□ -0.99
BRAT1-205ENST00000473879 STPG4Q8N801 248 aa8.87□□□□□ -0.99
BRAT1-205ENST00000473879 A0A087WZ39 114 aa8.86□□□□□ -0.99
BRAT1-205ENST00000473879 GAGE12HA6NDE8 117 aa8.86□□□□□ -0.99
BRAT1-205ENST00000473879 E9PLD3 99 aa8.86□□□□□ -0.99
BRAT1-205ENST00000473879 COX7A2LO14548 114 aa8.86□□□□□ -0.99
BRAT1-205ENST00000473879 Q9HAA7 133 aa8.86□□□□□ -0.99
BRAT1-205ENST00000473879 IGKV2D-24A0A075B6R9 120 aa8.85□□□□□ -0.99
BRAT1-205ENST00000473879 SPINK8P0C7L1 97 aa8.85□□□□□ -0.99
BRAT1-205ENST00000473879 FOXI1Q12951 378 aa8.85□□□□□ -0.99
BRAT1-205ENST00000473879 ANKRD39Q53RE8 183 aa8.85□□□□□ -0.99
BRAT1-205ENST00000473879 COX11Q9Y6N1 276 aa8.85□□□□□ -0.99
BRAT1-205ENST00000473879 IGHV1-58A0A0C4DH39 117 aa8.84□□□□□ -0.99
BRAT1-205ENST00000473879 SMIM1B2RUZ4 78 aa8.84□□□□□ -0.99
BRAT1-205ENST00000473879 MALP21145 153 aa8.84□□□□□ -0.99
BRAT1-205ENST00000473879 NMUP48645 174 aa8.84□□□□□ -0.99
BRAT1-205ENST00000473879 Q6ZRN7 208 aaPredicted RBP8.84□□□□□ -0.99
BRAT1-205ENST00000473879 C5orf38Q86SI9 138 aa8.84□□□□□ -0.99
BRAT1-205ENST00000473879 PLEKHB2Q96CS7 222 aa8.84□□□□□ -0.99
BRAT1-205ENST00000473879 LEPROTO15243 131 aa8.83□□□□□ -1
BRAT1-205ENST00000473879 APOMO95445 188 aa8.83□□□□□ -1
BRAT1-205ENST00000473879 TM2D2Q9BX73 214 aa8.83□□□□□ -1
BRAT1-205ENST00000473879 IGHV3-64A0A075B6Q5 118 aa8.82□□□□□ -1
BRAT1-205ENST00000473879 IGLV5-39A0A0G2JS06 123 aa8.82□□□□□ -1
BRAT1-205ENST00000473879 LGALS3P17931 250 aaKnown RBP8.82□□□□□ -1
BRAT1-205ENST00000473879 IGKV2D-26A0A0A0MRZ7 120 aa8.81□□□□□ -1
BRAT1-205ENST00000473879 J3QQQ9 107 aa8.81□□□□□ -1
BRAT1-205ENST00000473879 KRTAP26-1Q6PEX3 210 aa8.81□□□□□ -1
BRAT1-205ENST00000473879 TSTD3H0UI37 97 aa8.8□□□□□ -1
BRAT1-205ENST00000473879 COX8AP10176 69 aa8.8□□□□□ -1
BRAT1-205ENST00000473879 C16orf90A8MZG2 172 aa8.79□□□□□ -1
BRAT1-205ENST00000473879 PRSS2P07478 247 aa8.79□□□□□ -1
BRAT1-205ENST00000473879 CFAP161Q6P656 301 aa8.79□□□□□ -1
BRAT1-205ENST00000473879 COX7B2Q8TF08 81 aa8.79□□□□□ -1
BRAT1-205ENST00000473879 ORAOV1Q8WV07 137 aa8.79□□□□□ -1
BRAT1-205ENST00000473879 APOBP04114 4563 aaKnown RBP8.79□□□□□ -1
BRAT1-205ENST00000473879 HSPG2P98160 4391 aa8.78□□□□□ -1
BRAT1-205ENST00000473879 PSCAO43653 123 aa8.78□□□□□ -1
BRAT1-205ENST00000473879 SLC25A34Q6PIV7 304 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms