RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 GAGE4Q13068 117 aa15.03■□□□□ -0
COL18A1-207ENST00000473212 FAM19A3Q7Z5A8 133 aa15.03■□□□□ -0
COL18A1-207ENST00000473212 FAM240AA0A1B0GVK7 77 aa15.02■□□□□ -0
COL18A1-207ENST00000473212 HIST2H2BCQ6DN03 193 aa15.02■□□□□ -0
COL18A1-207ENST00000473212 ESM1Q9NQ30 184 aa15.02■□□□□ -0
COL18A1-207ENST00000473212 CDC42SE2Q9NRR3 84 aa15.02□□□□□ -0.01
COL18A1-207ENST00000473212 CSDC2Q9Y534 153 aaKnown RBP15.02□□□□□ -0.01
COL18A1-207ENST00000473212 DNAJC9-AS1A6NH13 148 aa15.01□□□□□ -0.01
COL18A1-207ENST00000473212 F5H768 121 aa15.01□□□□□ -0.01
COL18A1-207ENST00000473212 CCDC179H3BU77 68 aa15.01□□□□□ -0.01
COL18A1-207ENST00000473212 DAZ2Q13117 558 aaKnown RBP15.01□□□□□ -0.01
COL18A1-207ENST00000473212 SHISA2Q6UWI4 295 aa15.01□□□□□ -0.01
COL18A1-207ENST00000473212 DAZ4Q86SG3 579 aaKnown RBP15.01□□□□□ -0.01
COL18A1-207ENST00000473212 WFDC11Q8NEX6 87 aa15.01□□□□□ -0.01
COL18A1-207ENST00000473212 DAZ3Q9NR90 486 aaKnown RBP15.01□□□□□ -0.01
COL18A1-207ENST00000473212 TRBV10-1A0A0K0K1A3 114 aa15□□□□□ -0.01
COL18A1-207ENST00000473212 LOC100131303A0A0U1RQF7 123 aa15□□□□□ -0.01
COL18A1-207ENST00000473212 MRPL23Q16540 153 aaKnown RBP15□□□□□ -0.01
COL18A1-207ENST00000473212 NOP10Q9NPE3 64 aaKnown RBP15□□□□□ -0.01
COL18A1-207ENST00000473212 COPS9Q8WXC6 57 aa15□□□□□ -0.01
COL18A1-207ENST00000473212 TENM4Q6N022 2769 aa15□□□□□ -0.01
COL18A1-207ENST00000473212 CCL24O00175 119 aa14.99□□□□□ -0.01
COL18A1-207ENST00000473212 GAGE7O76087 117 aa14.99□□□□□ -0.01
COL18A1-207ENST00000473212 GAGE12FP0CL80 117 aa14.99□□□□□ -0.01
COL18A1-207ENST00000473212 GAGE12GP0CL81 117 aa14.99□□□□□ -0.01
COL18A1-207ENST00000473212 GAGE12IP0CL82 117 aa14.99□□□□□ -0.01
COL18A1-207ENST00000473212 GIG44P09565 113 aaPredicted RBP14.98□□□□□ -0.01
COL18A1-207ENST00000473212 NBEAL2Q6ZNJ1 2754 aa14.97□□□□□ -0.01
COL18A1-207ENST00000473212 ITPR2Q14571 2701 aa14.96□□□□□ -0.01
COL18A1-207ENST00000473212 UBE2L6O14933 153 aa14.95□□□□□ -0.02
COL18A1-207ENST00000473212 RPL35AP18077 110 aaKnown RBP14.95□□□□□ -0.02
COL18A1-207ENST00000473212 HERV-K104P63124 156 aa14.95□□□□□ -0.02
COL18A1-207ENST00000473212 TRAV25A0A0B4J276 109 aa14.94□□□□□ -0.02
COL18A1-207ENST00000473212 GCN1Q92616 2671 aaKnown RBP14.94□□□□□ -0.02
COL18A1-207ENST00000473212 FAM218AQ96MZ4 157 aa14.94□□□□□ -0.02
COL18A1-207ENST00000473212 TMEM243Q9BU79 118 aa14.94□□□□□ -0.02
COL18A1-207ENST00000473212 IGKV3OR2-268A0A0C4DH90 116 aa14.93□□□□□ -0.02
COL18A1-207ENST00000473212 BAALC-AS2P0C853 105 aa14.92□□□□□ -0.02
COL18A1-207ENST00000473212 PLAC8L1A1L4L8 177 aa14.92□□□□□ -0.02
COL18A1-207ENST00000473212 TRACP01848 142 aa14.91□□□□□ -0.02
COL18A1-207ENST00000473212 ANK3Q12955 4377 aaKnown RBP14.91□□□□□ -0.02
COL18A1-207ENST00000473212 TRBV7-7A0A0K0K1E9 115 aa14.9□□□□□ -0.02
COL18A1-207ENST00000473212 CHCHD5Q9BSY4 110 aa14.9□□□□□ -0.02
COL18A1-207ENST00000473212 TOMM7Q9P0U1 55 aa14.9□□□□□ -0.02
COL18A1-207ENST00000473212 TRGV2A0A075B6R0 118 aa14.89□□□□□ -0.03
COL18A1-207ENST00000473212 ACYP1P07311 99 aa14.89□□□□□ -0.03
COL18A1-207ENST00000473212 PDZD2O15018 2839 aa14.89□□□□□ -0.03
COL18A1-207ENST00000473212 LRRC75A-AS1Q8N1F1 130 aa14.89□□□□□ -0.03
COL18A1-207ENST00000473212 C22orf24Q9Y442 160 aa14.89□□□□□ -0.03
COL18A1-207ENST00000473212 MIR7-3HGQ8N6C7 128 aa14.88□□□□□ -0.03
COL18A1-207ENST00000473212 SMCR5Q8TEV8 140 aa14.88□□□□□ -0.03
COL18A1-207ENST00000473212 COX7B2Q8TF08 81 aa14.88□□□□□ -0.03
COL18A1-207ENST00000473212 Q9HAA7 133 aa14.87□□□□□ -0.03
COL18A1-207ENST00000473212 LINC00337Q8N6G1 96 aa14.87□□□□□ -0.03
COL18A1-207ENST00000473212 TRAV13-2A0A0B4J235 113 aa14.86□□□□□ -0.03
COL18A1-207ENST00000473212 CRPP02741 224 aa14.86□□□□□ -0.03
COL18A1-207ENST00000473212 LINC01006Q8NI28 216 aa14.85□□□□□ -0.03
COL18A1-207ENST00000473212 VWFP04275 2813 aa14.85□□□□□ -0.03
COL18A1-207ENST00000473212 IGKV2-28A0A075B6P5 120 aa14.85□□□□□ -0.03
COL18A1-207ENST00000473212 IGKV2D-28P01615 120 aa14.85□□□□□ -0.03
COL18A1-207ENST00000473212 SVIPQ8NHG7 77 aa14.85□□□□□ -0.03
COL18A1-207ENST00000473212 SND1-IT1Q9HBX3 110 aa14.85□□□□□ -0.03
COL18A1-207ENST00000473212 IGLV4-60A0A075B6I1 120 aa14.84□□□□□ -0.03
COL18A1-207ENST00000473212 RPL28P46779 137 aaKnown RBP14.84□□□□□ -0.03
COL18A1-207ENST00000473212 TMEM86BQ8N661 226 aa14.84□□□□□ -0.03
COL18A1-207ENST00000473212 C16orf74Q96GX8 76 aa14.84□□□□□ -0.03
COL18A1-207ENST00000473212 PPDPFQ9H3Y8 114 aa14.84□□□□□ -0.03
COL18A1-207ENST00000473212 C19orf73Q9NVV2 129 aa14.84□□□□□ -0.03
COL18A1-207ENST00000473212 TRGV4A0A0C4DH28 118 aa14.83□□□□□ -0.04
COL18A1-207ENST00000473212 PF4P02776 101 aa14.83□□□□□ -0.04
COL18A1-207ENST00000473212 LINC00158P58513 81 aa14.83□□□□□ -0.04
COL18A1-207ENST00000473212 FAM236AA0A1B0GUQ0 79 aa14.82□□□□□ -0.04
COL18A1-207ENST00000473212 FAM236BA0A1B0GV22 79 aa14.82□□□□□ -0.04
COL18A1-207ENST00000473212 TRBV6-4A0A1B0GX49 114 aa14.82□□□□□ -0.04
COL18A1-207ENST00000473212 FAM222AQ5U5X8 452 aa14.81□□□□□ -0.04
COL18A1-207ENST00000473212 MALP21145 153 aa14.8□□□□□ -0.04
COL18A1-207ENST00000473212 LINC00643Q86TS7 51 aa14.8□□□□□ -0.04
COL18A1-207ENST00000473212 CSNK1G2-AS1Q8NCQ2 148 aa14.8□□□□□ -0.04
COL18A1-207ENST00000473212 SMIM11BQ8TCY0 68 aa14.79□□□□□ -0.04
COL18A1-207ENST00000473212 IMUPQ9GZP8 106 aa14.79□□□□□ -0.04
COL18A1-207ENST00000473212 KRTAP1-1Q07627 177 aa14.79□□□□□ -0.04
COL18A1-207ENST00000473212 GAGE2AQ6NT46 116 aa14.79□□□□□ -0.04
COL18A1-207ENST00000473212 A0A087WYN8 130 aa14.78□□□□□ -0.04
COL18A1-207ENST00000473212 CCL18P55774 89 aa14.78□□□□□ -0.04
COL18A1-207ENST00000473212 TRBV6-8A0A0A6YYG3 113 aa14.77□□□□□ -0.04
COL18A1-207ENST00000473212 IGHV3OR16-9A0A0B4J2B5 98 aa14.77□□□□□ -0.04
COL18A1-207ENST00000473212 C5orf38Q86SI9 138 aa14.77□□□□□ -0.04
COL18A1-207ENST00000473212 PFN2P35080 140 aa14.77□□□□□ -0.05
COL18A1-207ENST00000473212 IGLV1-51P01701 117 aa14.76□□□□□ -0.05
COL18A1-207ENST00000473212 INAFM2P0DMQ5 153 aa14.76□□□□□ -0.05
COL18A1-207ENST00000473212 FHL2Q14192 279 aa14.76□□□□□ -0.05
COL18A1-207ENST00000473212 SDIM1Q6ZPB5 146 aa14.76□□□□□ -0.05
COL18A1-207ENST00000473212 OVOL2Q9BRP0 275 aa14.76□□□□□ -0.05
COL18A1-207ENST00000473212 HIVEP2P31629 2446 aa14.76□□□□□ -0.05
COL18A1-207ENST00000473212 C3orf56Q8N813 242 aa14.75□□□□□ -0.05
COL18A1-207ENST00000473212 HELZ2Q9BYK8 2649 aaKnown RBP14.75□□□□□ -0.05
COL18A1-207ENST00000473212 DNAL4O96015 105 aa14.74□□□□□ -0.05
COL18A1-207ENST00000473212 DEFB130BP0DP73 79 aa14.74□□□□□ -0.05
COL18A1-207ENST00000473212 DEFB130AP0DP74 79 aa14.74□□□□□ -0.05
COL18A1-207ENST00000473212 C11orf68Q9H3H3 251 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms