RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 NOP10Q9NPE3 64 aaKnown RBP12.42□□□□□ -0.42
RRP1-202ENST00000471909 PLAC8L1A1L4L8 177 aa12.41□□□□□ -0.42
RRP1-202ENST00000471909 RNASE13Q5GAN3 156 aaKnown RBP12.41□□□□□ -0.42
RRP1-202ENST00000471909 C15orf53Q8NAA6 179 aa12.41□□□□□ -0.42
RRP1-202ENST00000471909 H7C423 109 aa12.41□□□□□ -0.42
RRP1-202ENST00000471909 VWFP04275 2813 aa12.4□□□□□ -0.42
RRP1-202ENST00000471909 H3BT86 120 aa12.4□□□□□ -0.42
RRP1-202ENST00000471909 DAZ2Q13117 558 aaKnown RBP12.4□□□□□ -0.42
RRP1-202ENST00000471909 NPC2P61916 151 aa12.4□□□□□ -0.42
RRP1-202ENST00000471909 VSIG2Q96IQ7 327 aa12.4□□□□□ -0.42
RRP1-202ENST00000471909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.39□□□□□ -0.43
RRP1-202ENST00000471909 IGKV2-29A2NJV5 120 aaPredicted RBP12.39□□□□□ -0.43
RRP1-202ENST00000471909 C16orf74Q96GX8 76 aa12.39□□□□□ -0.43
RRP1-202ENST00000471909 HERV-K104P63124 156 aa12.39□□□□□ -0.43
RRP1-202ENST00000471909 SPATA3Q8NHX4 192 aa12.39□□□□□ -0.43
RRP1-202ENST00000471909 UBE2D4Q9Y2X8 147 aa12.39□□□□□ -0.43
RRP1-202ENST00000471909 TINCRA0A1B0GVN0 87 aa12.38□□□□□ -0.43
RRP1-202ENST00000471909 GAGE12JA6NER3 117 aa12.38□□□□□ -0.43
RRP1-202ENST00000471909 GAGE7O76087 117 aa12.38□□□□□ -0.43
RRP1-202ENST00000471909 GAGE12FP0CL80 117 aa12.38□□□□□ -0.43
RRP1-202ENST00000471909 GAGE12GP0CL81 117 aa12.38□□□□□ -0.43
RRP1-202ENST00000471909 GAGE12IP0CL82 117 aa12.38□□□□□ -0.43
RRP1-202ENST00000471909 GAGE4Q13068 117 aa12.38□□□□□ -0.43
RRP1-202ENST00000471909 CLEC2BQ92478 149 aa12.38□□□□□ -0.43
RRP1-202ENST00000471909 A8MZ25 164 aa12.37□□□□□ -0.43
RRP1-202ENST00000471909 TENM1Q9UKZ4 2725 aa12.37□□□□□ -0.43
RRP1-202ENST00000471909 SPANXA1Q9NS26 97 aa12.37□□□□□ -0.43
RRP1-202ENST00000471909 K7EQD1 137 aa12.36□□□□□ -0.43
RRP1-202ENST00000471909 LST1O00453 97 aa12.36□□□□□ -0.43
RRP1-202ENST00000471909 CCDC179H3BU77 68 aa12.35□□□□□ -0.43
RRP1-202ENST00000471909 TRBV10-1A0A0K0K1A3 114 aa12.35□□□□□ -0.43
RRP1-202ENST00000471909 MRPL23Q16540 153 aaKnown RBP12.34□□□□□ -0.43
RRP1-202ENST00000471909 OVOL2Q9BRP0 275 aa12.34□□□□□ -0.43
RRP1-202ENST00000471909 RPL36AP83881 106 aaKnown RBP12.34□□□□□ -0.43
RRP1-202ENST00000471909 RPL36ALQ969Q0 106 aaKnown RBP12.34□□□□□ -0.43
RRP1-202ENST00000471909 TRGV2A0A075B6R0 118 aa12.33□□□□□ -0.44
RRP1-202ENST00000471909 FAM240AA0A1B0GVK7 77 aa12.33□□□□□ -0.44
RRP1-202ENST00000471909 TIMM17BO60830 172 aa12.33□□□□□ -0.44
RRP1-202ENST00000471909 DAND5Q8N907 189 aa12.32□□□□□ -0.44
RRP1-202ENST00000471909 DEFB121Q5J5C9 76 aa12.31□□□□□ -0.44
RRP1-202ENST00000471909 NTM-AS1Q6ZSK4 140 aa12.31□□□□□ -0.44
RRP1-202ENST00000471909 DAZ4Q86SG3 579 aaKnown RBP12.31□□□□□ -0.44
RRP1-202ENST00000471909 DAZ3Q9NR90 486 aaKnown RBP12.31□□□□□ -0.44
RRP1-202ENST00000471909 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.3□□□□□ -0.44
RRP1-202ENST00000471909 LINC00694P0DN24 101 aa12.3□□□□□ -0.44
RRP1-202ENST00000471909 C9orf66Q5T8R8 295 aa12.3□□□□□ -0.44
RRP1-202ENST00000471909 CDKN2A-AS1Q9UH64 79 aa12.3□□□□□ -0.44
RRP1-202ENST00000471909 NDUFA1O15239 70 aa12.29□□□□□ -0.44
RRP1-202ENST00000471909 CIRBPQ14011 172 aaKnown RBP12.29□□□□□ -0.44
RRP1-202ENST00000471909 LOC100131303A0A0U1RQF7 123 aa12.28□□□□□ -0.44
RRP1-202ENST00000471909 ATRQ13535 2644 aa12.28□□□□□ -0.44
RRP1-202ENST00000471909 TRBV6-4A0A1B0GX49 114 aa12.27□□□□□ -0.45
RRP1-202ENST00000471909 DGAT2L7PQ6IED9 249 aa12.27□□□□□ -0.45
RRP1-202ENST00000471909 TMEM101Q96IK0 257 aa12.27□□□□□ -0.45
RRP1-202ENST00000471909 TIRAPP58753 221 aa12.26□□□□□ -0.45
RRP1-202ENST00000471909 IGLV5-45A0A087WSX0 123 aa12.26□□□□□ -0.45
RRP1-202ENST00000471909 TRGV4A0A0C4DH28 118 aa12.26□□□□□ -0.45
RRP1-202ENST00000471909 FHL2Q14192 279 aa12.26□□□□□ -0.45
RRP1-202ENST00000471909 TEP1Q99973 2627 aaKnown RBP12.25□□□□□ -0.45
RRP1-202ENST00000471909 TRBV7-7A0A0K0K1E9 115 aa12.25□□□□□ -0.45
RRP1-202ENST00000471909 SMIM20Q8N5G0 67 aa12.25□□□□□ -0.45
RRP1-202ENST00000471909 LINC00308Q8TCZ7 52 aa12.25□□□□□ -0.45
RRP1-202ENST00000471909 NBEAL2Q6ZNJ1 2754 aa12.24□□□□□ -0.45
RRP1-202ENST00000471909 Q9H8V8 135 aa12.24□□□□□ -0.45
RRP1-202ENST00000471909 X6R8D5 127 aa12.24□□□□□ -0.45
RRP1-202ENST00000471909 TRRAPQ9Y4A5 3859 aa12.24□□□□□ -0.45
RRP1-202ENST00000471909 CSDC2Q9Y534 153 aaKnown RBP12.24□□□□□ -0.45
RRP1-202ENST00000471909 COX7A2LO14548 114 aa12.22□□□□□ -0.45
RRP1-202ENST00000471909 DEFB130BP0DP73 79 aa12.22□□□□□ -0.45
RRP1-202ENST00000471909 DEFB130AP0DP74 79 aa12.22□□□□□ -0.45
RRP1-202ENST00000471909 MEIG1Q5JSS6 88 aa12.22□□□□□ -0.45
RRP1-202ENST00000471909 KIR2DL5BQ8NHK3 375 aa12.22□□□□□ -0.45
RRP1-202ENST00000471909 A0A0U1RRA0 63 aa12.21□□□□□ -0.45
RRP1-202ENST00000471909 ACYP1P07311 99 aa12.21□□□□□ -0.45
RRP1-202ENST00000471909 HERVK_113P63121 156 aa12.21□□□□□ -0.45
RRP1-202ENST00000471909 COX6A2Q02221 97 aa12.21□□□□□ -0.45
RRP1-202ENST00000471909 ZNF625Q96I27 306 aaPredicted RBP12.21□□□□□ -0.45
RRP1-202ENST00000471909 CHCHD5Q9BSY4 110 aa12.21□□□□□ -0.45
RRP1-202ENST00000471909 IGLV5-39A0A0G2JS06 123 aa12.21□□□□□ -0.45
RRP1-202ENST00000471909 LINC00612Q8N6U2 182 aa12.21□□□□□ -0.45
RRP1-202ENST00000471909 COPS9Q8WXC6 57 aa12.21□□□□□ -0.45
RRP1-202ENST00000471909 TMEM243Q9BU79 118 aa12.2□□□□□ -0.46
RRP1-202ENST00000471909 CDC42SE2Q9NRR3 84 aa12.2□□□□□ -0.46
RRP1-202ENST00000471909 LINC00242Q5T6M2 205 aa12.2□□□□□ -0.46
RRP1-202ENST00000471909 SMIM9A6NGZ8 99 aa12.19□□□□□ -0.46
RRP1-202ENST00000471909 FLNBO75369 2602 aaKnown RBP12.19□□□□□ -0.46
RRP1-202ENST00000471909 UBE2L6O14933 153 aa12.18□□□□□ -0.46
RRP1-202ENST00000471909 TRAV13-1A0A0B4J241 112 aa12.17□□□□□ -0.46
RRP1-202ENST00000471909 FAM19A3Q7Z5A8 133 aa12.17□□□□□ -0.46
RRP1-202ENST00000471909 WFDC9Q8NEX5 89 aa12.17□□□□□ -0.46
RRP1-202ENST00000471909 DEFB135Q30KP9 77 aa12.17□□□□□ -0.46
RRP1-202ENST00000471909 SOSTDC1Q6X4U4 206 aa12.17□□□□□ -0.46
RRP1-202ENST00000471909 IMUPQ9GZP8 106 aa12.17□□□□□ -0.46
RRP1-202ENST00000471909 F8P00451 2351 aa12.17□□□□□ -0.46
RRP1-202ENST00000471909 PRIMA1Q86XR5 153 aa12.16□□□□□ -0.46
RRP1-202ENST00000471909 FAM236AA0A1B0GUQ0 79 aa12.16□□□□□ -0.46
RRP1-202ENST00000471909 FAM236BA0A1B0GV22 79 aa12.16□□□□□ -0.46
RRP1-202ENST00000471909 SMIM1B2RUZ4 78 aa12.16□□□□□ -0.46
RRP1-202ENST00000471909 TRBV6-8A0A0A6YYG3 113 aa12.15□□□□□ -0.46
RRP1-202ENST00000471909 TRACP01848 142 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms