RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 A0A096LPF7 62 aa4.2□□□□□ -1.74
SMNDC1-204ENST00000471297 TRAV10A0A0B4J240 114 aa4.2□□□□□ -1.74
SMNDC1-204ENST00000471297 IGLV5-39A0A0G2JS06 123 aa4.2□□□□□ -1.74
SMNDC1-204ENST00000471297 A0A0J9YXV3 536 aa4.2□□□□□ -1.74
SMNDC1-204ENST00000471297 E9PLD3 99 aa4.2□□□□□ -1.74
SMNDC1-204ENST00000471297 UBE2D1P51668 147 aa4.2□□□□□ -1.74
SMNDC1-204ENST00000471297 HNRNPA3P51991 378 aaKnown RBP4.2□□□□□ -1.74
SMNDC1-204ENST00000471297 NANOS2P60321 138 aaKnown RBP4.2□□□□□ -1.74
SMNDC1-204ENST00000471297 DEFA6Q01524 100 aa4.2□□□□□ -1.74
SMNDC1-204ENST00000471297 TMEM170BQ5T4T1 132 aa4.2□□□□□ -1.74
SMNDC1-204ENST00000471297 LELP1Q5T871 98 aa4.2□□□□□ -1.74
SMNDC1-204ENST00000471297 Q6ZTC4 211 aa4.2□□□□□ -1.74
SMNDC1-204ENST00000471297 Q6ZUT4 128 aa4.2□□□□□ -1.74
SMNDC1-204ENST00000471297 B9D2Q9BPU9 175 aa4.2□□□□□ -1.74
SMNDC1-204ENST00000471297 MRPS16Q9Y3D3 137 aaKnown RBP4.2□□□□□ -1.74
SMNDC1-204ENST00000471297 TMEM223A0PJW6 202 aa4.19□□□□□ -1.74
SMNDC1-204ENST00000471297 LINC00587B1AMM8 73 aa4.19□□□□□ -1.74
SMNDC1-204ENST00000471297 TMEM262E9PQX1 116 aa4.19□□□□□ -1.74
SMNDC1-204ENST00000471297 CCL25O15444 150 aa4.19□□□□□ -1.74
SMNDC1-204ENST00000471297 ZNF22P17026 224 aaPredicted RBP4.19□□□□□ -1.74
SMNDC1-204ENST00000471297 NMUP48645 174 aa4.19□□□□□ -1.74
SMNDC1-204ENST00000471297 HERVK_113P63121 156 aa4.19□□□□□ -1.74
SMNDC1-204ENST00000471297 LYPD5Q6UWN5 251 aa4.19□□□□□ -1.74
SMNDC1-204ENST00000471297 BOD1L2Q8IYS8 172 aa4.19□□□□□ -1.74
SMNDC1-204ENST00000471297 CHAC1Q9BUX1 264 aa4.19□□□□□ -1.74
SMNDC1-204ENST00000471297 GEMIN7Q9H840 131 aaKnown RBP4.19□□□□□ -1.74
SMNDC1-204ENST00000471297 TRAV8-6A0A0B4J262 113 aa4.18□□□□□ -1.74
SMNDC1-204ENST00000471297 H3BRM9 83 aa4.18□□□□□ -1.74
SMNDC1-204ENST00000471297 LEPROTO15243 131 aa4.18□□□□□ -1.74
SMNDC1-204ENST00000471297 IGKV2-30P06310 120 aa4.18□□□□□ -1.74
SMNDC1-204ENST00000471297 RBX1P62877 108 aa4.18□□□□□ -1.74
SMNDC1-204ENST00000471297 RNASE13Q5GAN3 156 aaKnown RBP4.18□□□□□ -1.74
SMNDC1-204ENST00000471297 C15orf53Q8NAA6 179 aa4.18□□□□□ -1.74
SMNDC1-204ENST00000471297 PLEKHB2Q96CS7 222 aa4.18□□□□□ -1.74
SMNDC1-204ENST00000471297 MAST4O15021 2626 aa4.17□□□□□ -1.74
SMNDC1-204ENST00000471297 IGLV4-60A0A075B6I1 120 aa4.17□□□□□ -1.74
SMNDC1-204ENST00000471297 IGLV5-45A0A087WSX0 123 aa4.17□□□□□ -1.74
SMNDC1-204ENST00000471297 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
SMNDC1-204ENST00000471297 IGKV2D-26A0A0A0MRZ7 120 aa4.17□□□□□ -1.74
SMNDC1-204ENST00000471297 TRAV13-1A0A0B4J241 112 aa4.17□□□□□ -1.74
SMNDC1-204ENST00000471297 MYMXA0A1B0GTQ4 84 aa4.17□□□□□ -1.74
SMNDC1-204ENST00000471297 CTAG1AP78358 180 aa4.17□□□□□ -1.74
SMNDC1-204ENST00000471297 SS18Q15532 418 aa4.17□□□□□ -1.74
SMNDC1-204ENST00000471297 LINC00242Q5T6M2 205 aa4.17□□□□□ -1.74
SMNDC1-204ENST00000471297 HIGD1BQ9P298 99 aa4.17□□□□□ -1.74
SMNDC1-204ENST00000471297 STAB1Q9NY15 2570 aa4.16□□□□□ -1.74
SMNDC1-204ENST00000471297 COL6A5A8TX70 2615 aa4.16□□□□□ -1.74
SMNDC1-204ENST00000471297 VWFP04275 2813 aa4.16□□□□□ -1.74
SMNDC1-204ENST00000471297 IGHV1-58A0A0C4DH39 117 aa4.16□□□□□ -1.74
SMNDC1-204ENST00000471297 LINC00959A0A1B0GUT2 108 aa4.16□□□□□ -1.74
SMNDC1-204ENST00000471297 J3QQQ9 107 aa4.16□□□□□ -1.74
SMNDC1-204ENST00000471297 M0R143 59 aa4.16□□□□□ -1.74
SMNDC1-204ENST00000471297 LGALS3P17931 250 aaKnown RBP4.16□□□□□ -1.74
SMNDC1-204ENST00000471297 LBHQ53QV2 105 aaPredicted RBP4.16□□□□□ -1.74
SMNDC1-204ENST00000471297 MPV17L2Q567V2 206 aa4.16□□□□□ -1.74
SMNDC1-204ENST00000471297 PCP2Q8IVA1 136 aa4.16□□□□□ -1.74
SMNDC1-204ENST00000471297 LINC00469Q8N7U9 141 aa4.16□□□□□ -1.74
SMNDC1-204ENST00000471297 MAPKAPK5-AS1Q8N8E1 139 aa4.16□□□□□ -1.74
SMNDC1-204ENST00000471297 ZNF815PA8K554 130 aa4.15□□□□□ -1.75
SMNDC1-204ENST00000471297 ANGP03950 147 aaKnown RBP4.15□□□□□ -1.75
SMNDC1-204ENST00000471297 TCTAP57738 103 aa4.15□□□□□ -1.75
SMNDC1-204ENST00000471297 COX6A2Q02221 97 aa4.15□□□□□ -1.75
SMNDC1-204ENST00000471297 TAL2Q16559 108 aa4.15□□□□□ -1.75
SMNDC1-204ENST00000471297 ESRGQ1W209 222 aa4.15□□□□□ -1.75
SMNDC1-204ENST00000471297 LINC01561Q8N1V8 128 aa4.15□□□□□ -1.75
SMNDC1-204ENST00000471297 CDKN2A-AS1Q9UH64 79 aa4.15□□□□□ -1.75
SMNDC1-204ENST00000471297 IGKV3OR2-268A0A0C4DH90 116 aa4.14□□□□□ -1.75
SMNDC1-204ENST00000471297 IGHV3-30-3P0DP02 117 aa4.14□□□□□ -1.75
SMNDC1-204ENST00000471297 HSD52Q0P140 79 aa4.14□□□□□ -1.75
SMNDC1-204ENST00000471297 C2orf91Q6ZV80 131 aa4.14□□□□□ -1.75
SMNDC1-204ENST00000471297 LINC00269Q8N2A0 174 aa4.14□□□□□ -1.75
SMNDC1-204ENST00000471297 Q8N9P0 234 aaPredicted RBP4.14□□□□□ -1.75
SMNDC1-204ENST00000471297 A0A087WZ39 114 aa4.13□□□□□ -1.75
SMNDC1-204ENST00000471297 TRAV8-3A0A0A6YYJ7 113 aa4.13□□□□□ -1.75
SMNDC1-204ENST00000471297 TRAV8-4A0A0B4J246 113 aa4.13□□□□□ -1.75
SMNDC1-204ENST00000471297 IGHV3OR16-9A0A0B4J2B5 98 aa4.13□□□□□ -1.75
SMNDC1-204ENST00000471297 IGLL5B9A064 214 aa4.13□□□□□ -1.75
SMNDC1-204ENST00000471297 SPINK8P0C7L1 97 aa4.13□□□□□ -1.75
SMNDC1-204ENST00000471297 CCL18P55774 89 aa4.13□□□□□ -1.75
SMNDC1-204ENST00000471297 REG3AQ06141 175 aa4.13□□□□□ -1.75
SMNDC1-204ENST00000471297 ZFAND6Q6FIF0 208 aa4.13□□□□□ -1.75
SMNDC1-204ENST00000471297 CD164L2Q6UWJ8 174 aa4.13□□□□□ -1.75
SMNDC1-204ENST00000471297 SCGB1D4Q6XE38 83 aa4.13□□□□□ -1.75
SMNDC1-204ENST00000471297 SNHG12Q9BXW3 62 aa4.13□□□□□ -1.75
SMNDC1-204ENST00000471297 TTTY13Q9BZ97 58 aa4.13□□□□□ -1.75
SMNDC1-204ENST00000471297 PRR34Q9NV39 138 aa4.13□□□□□ -1.75
SMNDC1-204ENST00000471297 IGHV3-64A0A075B6Q5 118 aa4.12□□□□□ -1.75
SMNDC1-204ENST00000471297 SMIM1B2RUZ4 78 aa4.12□□□□□ -1.75
SMNDC1-204ENST00000471297 CRPP02741 224 aa4.12□□□□□ -1.75
SMNDC1-204ENST00000471297 HINT1P49773 126 aaPredicted RBP4.12□□□□□ -1.75
SMNDC1-204ENST00000471297 TSPEAR-AS2P59090 65 aa4.12□□□□□ -1.75
SMNDC1-204ENST00000471297 LINC01556Q5JQF7 62 aa4.12□□□□□ -1.75
SMNDC1-204ENST00000471297 COL5A1-AS1Q5SY13 56 aa4.12□□□□□ -1.75
SMNDC1-204ENST00000471297 BVES-AS1Q5T3Y7 98 aa4.12□□□□□ -1.75
SMNDC1-204ENST00000471297 SFTA2Q6UW10 78 aa4.12□□□□□ -1.75
SMNDC1-204ENST00000471297 HIST1H4GQ99525 98 aa4.12□□□□□ -1.75
SMNDC1-204ENST00000471297 SPANXB1Q9NS25 103 aaPredicted RBP4.12□□□□□ -1.75
SMNDC1-204ENST00000471297 NDUFA12Q9UI09 145 aa4.12□□□□□ -1.75
SMNDC1-204ENST00000471297 KLK12Q9UKR0 248 aa4.12□□□□□ -1.75
SMNDC1-204ENST00000471297 TRRAPQ9Y4A5 3859 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms