RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 UBE2D3P61077 147 aa12.21□□□□□ -0.45
HOXB3-205ENST00000470495 UBE2D2P62837 147 aa12.21□□□□□ -0.45
HOXB3-205ENST00000470495 IGKV3OR2-268A0A0C4DH90 116 aa12.21□□□□□ -0.45
HOXB3-205ENST00000470495 TRBV7-6A0A0J9YX20 115 aa12.21□□□□□ -0.45
HOXB3-205ENST00000470495 RNASE3P12724 160 aaKnown RBP12.21□□□□□ -0.45
HOXB3-205ENST00000470495 CNFNQ9BYD5 112 aa12.21□□□□□ -0.45
HOXB3-205ENST00000470495 IGHV3-38A0A0C4DH36 116 aa12.21□□□□□ -0.46
HOXB3-205ENST00000470495 APOC4P55056 127 aa12.21□□□□□ -0.46
HOXB3-205ENST00000470495 Q6ZSV7 163 aa12.21□□□□□ -0.46
HOXB3-205ENST00000470495 Q9HAA7 133 aa12.21□□□□□ -0.46
HOXB3-205ENST00000470495 PRM2P04554 102 aa12.2□□□□□ -0.46
HOXB3-205ENST00000470495 RPL39P62891 51 aaKnown RBP12.2□□□□□ -0.46
HOXB3-205ENST00000470495 PSMG3-AS1Q96PY0 264 aa12.2□□□□□ -0.46
HOXB3-205ENST00000470495 TIMM21Q9BVV7 248 aa12.2□□□□□ -0.46
HOXB3-205ENST00000470495 ENHOQ6UWT2 76 aa12.2□□□□□ -0.46
HOXB3-205ENST00000470495 H7C423 109 aa12.19□□□□□ -0.46
HOXB3-205ENST00000470495 XCL1P47992 114 aa12.19□□□□□ -0.46
HOXB3-205ENST00000470495 DCHS2Q6V1P9 2916 aa12.19□□□□□ -0.46
HOXB3-205ENST00000470495 HECTD1Q9ULT8 2610 aa12.19□□□□□ -0.46
HOXB3-205ENST00000470495 C4orf3Q8WVX3 66 aa12.19□□□□□ -0.46
HOXB3-205ENST00000470495 CRPP02741 224 aa12.19□□□□□ -0.46
HOXB3-205ENST00000470495 CFHR3Q02985 330 aa12.19□□□□□ -0.46
HOXB3-205ENST00000470495 TOMM7Q9P0U1 55 aa12.19□□□□□ -0.46
HOXB3-205ENST00000470495 LINC00474Q9P2X8 69 aa12.19□□□□□ -0.46
HOXB3-205ENST00000470495 A0A096LNJ9 63 aa12.18□□□□□ -0.46
HOXB3-205ENST00000470495 NRACQ8N912 160 aa12.18□□□□□ -0.46
HOXB3-205ENST00000470495 MDFIQ99750 246 aa12.18□□□□□ -0.46
HOXB3-205ENST00000470495 DAND5Q8N907 189 aa12.17□□□□□ -0.46
HOXB3-205ENST00000470495 A8MZ25 164 aa12.16□□□□□ -0.46
HOXB3-205ENST00000470495 MED14OSP0DP75 135 aa12.16□□□□□ -0.46
HOXB3-205ENST00000470495 KLLNB2CW77 178 aa12.16□□□□□ -0.46
HOXB3-205ENST00000470495 NDUFA12Q9UI09 145 aa12.16□□□□□ -0.46
HOXB3-205ENST00000470495 FLNAP21333 2647 aaKnown RBP12.16□□□□□ -0.46
HOXB3-205ENST00000470495 I3L3M4 83 aa12.16□□□□□ -0.46
HOXB3-205ENST00000470495 VSIG2Q96IQ7 327 aa12.16□□□□□ -0.46
HOXB3-205ENST00000470495 UPK3BQ9BT76 320 aa12.15□□□□□ -0.46
HOXB3-205ENST00000470495 CHKB-CPT1BH3BT56 60 aa12.15□□□□□ -0.46
HOXB3-205ENST00000470495 NXPH4O95158 308 aa12.15□□□□□ -0.46
HOXB3-205ENST00000470495 MAP6D1Q9H9H5 199 aa12.15□□□□□ -0.46
HOXB3-205ENST00000470495 A0A0J9YY99 117 aa12.14□□□□□ -0.47
HOXB3-205ENST00000470495 P0DMU3 169 aa12.14□□□□□ -0.47
HOXB3-205ENST00000470495 FAM231AP0DMU4 169 aa12.14□□□□□ -0.47
HOXB3-205ENST00000470495 FAM231CP0DMU5 169 aa12.14□□□□□ -0.47
HOXB3-205ENST00000470495 CRYBG3Q68DQ2 2970 aa12.13□□□□□ -0.47
HOXB3-205ENST00000470495 PLAC8L1A1L4L8 177 aa12.13□□□□□ -0.47
HOXB3-205ENST00000470495 DEFB114Q30KQ6 69 aa12.13□□□□□ -0.47
HOXB3-205ENST00000470495 TOMM6Q96B49 74 aa12.13□□□□□ -0.47
HOXB3-205ENST00000470495 OPRPNQ99935 248 aaPredicted RBP12.13□□□□□ -0.47
HOXB3-205ENST00000470495 TRGV4A0A0C4DH28 118 aa12.12□□□□□ -0.47
HOXB3-205ENST00000470495 TMEM256-PLSCR3K7ERE1 68 aa12.12□□□□□ -0.47
HOXB3-205ENST00000470495 BSNQ9UPA5 3926 aa12.12□□□□□ -0.47
HOXB3-205ENST00000470495 C11orf86A6NJI1 115 aa12.12□□□□□ -0.47
HOXB3-205ENST00000470495 UBE2D1P51668 147 aa12.12□□□□□ -0.47
HOXB3-205ENST00000470495 UTP20O75691 2785 aaKnown RBP12.12□□□□□ -0.47
HOXB3-205ENST00000470495 IGHV4-4A0A075B6R2 117 aa12.12□□□□□ -0.47
HOXB3-205ENST00000470495 PRR4Q16378 134 aa12.12□□□□□ -0.47
HOXB3-205ENST00000470495 RMI2Q96E14 147 aa12.12□□□□□ -0.47
HOXB3-205ENST00000470495 KLK9Q2XQG4 91 aa12.11□□□□□ -0.47
HOXB3-205ENST00000470495 ITPR3Q14573 2671 aa12.11□□□□□ -0.47
HOXB3-205ENST00000470495 TMEM141Q96I45 108 aa12.1□□□□□ -0.47
HOXB3-205ENST00000470495 A6NED7 52 aa12.1□□□□□ -0.47
HOXB3-205ENST00000470495 SMR3AQ99954 134 aa12.1□□□□□ -0.47
HOXB3-205ENST00000470495 PROK1P58294 105 aa12.1□□□□□ -0.47
HOXB3-205ENST00000470495 DEFB130BP0DP73 79 aa12.09□□□□□ -0.47
HOXB3-205ENST00000470495 DEFB130AP0DP74 79 aa12.09□□□□□ -0.47
HOXB3-205ENST00000470495 RPL36AP83881 106 aaKnown RBP12.09□□□□□ -0.47
HOXB3-205ENST00000470495 RPL36ALQ969Q0 106 aaKnown RBP12.09□□□□□ -0.47
HOXB3-205ENST00000470495 MRPS36P82909 103 aaKnown RBP12.09□□□□□ -0.47
HOXB3-205ENST00000470495 Q5XG85 94 aa12.09□□□□□ -0.47
HOXB3-205ENST00000470495 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.09□□□□□ -0.47
HOXB3-205ENST00000470495 IGKV2-29A2NJV5 120 aaPredicted RBP12.09□□□□□ -0.47
HOXB3-205ENST00000470495 PLA2G2AP14555 144 aa12.09□□□□□ -0.47
HOXB3-205ENST00000470495 NOP10Q9NPE3 64 aaKnown RBP12.09□□□□□ -0.47
HOXB3-205ENST00000470495 CSMD1Q96PZ7 3565 aa12.09□□□□□ -0.47
HOXB3-205ENST00000470495 COX7A2LO14548 114 aa12.08□□□□□ -0.48
HOXB3-205ENST00000470495 FHL2Q14192 279 aa12.08□□□□□ -0.48
HOXB3-205ENST00000470495 TMEM223A0PJW6 202 aa12.07□□□□□ -0.48
HOXB3-205ENST00000470495 NANOS2P60321 138 aaKnown RBP12.07□□□□□ -0.48
HOXB3-205ENST00000470495 NEXN-AS1Q8NBZ9 246 aa12.07□□□□□ -0.48
HOXB3-205ENST00000470495 A0A096LNT2 108 aa12.06□□□□□ -0.48
HOXB3-205ENST00000470495 LEPROTO15243 131 aa12.06□□□□□ -0.48
HOXB3-205ENST00000470495 LINC01006Q8NI28 216 aa12.06□□□□□ -0.48
HOXB3-205ENST00000470495 CMC4P56277 68 aaPredicted RBP12.06□□□□□ -0.48
HOXB3-205ENST00000470495 ZNF580Q9UK33 172 aa12.06□□□□□ -0.48
HOXB3-205ENST00000470495 SVEP1Q4LDE5 3571 aa12.06□□□□□ -0.48
HOXB3-205ENST00000470495 TRBV30A0A0K0K1B3 111 aa12.06□□□□□ -0.48
HOXB3-205ENST00000470495 IGHV3-30P01768 117 aa12.06□□□□□ -0.48
HOXB3-205ENST00000470495 IGHV3-30-5P0DP03 117 aa12.06□□□□□ -0.48
HOXB3-205ENST00000470495 ZANQ9Y493 2812 aa12.06□□□□□ -0.48
HOXB3-205ENST00000470495 CCKP06307 115 aa12.05□□□□□ -0.48
HOXB3-205ENST00000470495 HILS1P60008 231 aa12.05□□□□□ -0.48
HOXB3-205ENST00000470495 LINC00158P58513 81 aa12.05□□□□□ -0.48
HOXB3-205ENST00000470495 UBE2BP63146 152 aa12.05□□□□□ -0.48
HOXB3-205ENST00000470495 HELZ2Q9BYK8 2649 aaKnown RBP12.05□□□□□ -0.48
HOXB3-205ENST00000470495 A0A0J9YXV3 536 aa12.05□□□□□ -0.48
HOXB3-205ENST00000470495 M0QY20 66 aa12.04□□□□□ -0.48
HOXB3-205ENST00000470495 HTN3P15516 51 aa12.04□□□□□ -0.48
HOXB3-205ENST00000470495 OVOL2Q9BRP0 275 aa12.04□□□□□ -0.48
HOXB3-205ENST00000470495 TEX15Q9BXT5 2789 aa12.04□□□□□ -0.48
HOXB3-205ENST00000470495 C5orf38Q86SI9 138 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 555.6 ms