RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 F8WEM9 126 aa2.01□□□□□ -2.09
COL11A1-208ENST00000470170 H3BRN7 92 aa2.01□□□□□ -2.09
COL11A1-208ENST00000470170 SNRNP200O75643 2136 aaKnown RBP2.01□□□□□ -2.09
COL11A1-208ENST00000470170 COX7B2Q8TF08 81 aa2.01□□□□□ -2.09
COL11A1-208ENST00000470170 WFDC10AQ9H1F0 79 aa2.01□□□□□ -2.09
COL11A1-208ENST00000470170 TMEM14CQ9P0S9 112 aa2.01□□□□□ -2.09
COL11A1-208ENST00000470170 R4GMQ9 66 aa2.01□□□□□ -2.09
COL11A1-208ENST00000470170 VCANP13611 3396 aa2.01□□□□□ -2.09
COL11A1-208ENST00000470170 PCNX2A6NKB5 2137 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 KIAA2026Q5HYC2 2103 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 CEP290O15078 2479 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 DOPEY1Q5JWR5 2465 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 ARHGAP32A7KAX9 2087 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 HEATR5BQ9P2D3 2071 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 CEBPZOSA8MTT3 80 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 IQCF6A8MYZ5 107 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 CCL3L1P16619 93 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 PLGLAQ15195 96 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 TPRXLQ17RH7 258 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 DEFB121Q5J5C9 76 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 C10orf55Q5SWW7 151 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 C6orf201Q7Z4U5 140 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 ARL2-SNX15V9GYD0 113 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 NINQ8N4C6 2090 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 C1orf167Q5SNV9 1468 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 ABCA12Q86UK0 2595 aa2□□□□□ -2.09
COL11A1-208ENST00000470170 MYH4Q9Y623 1939 aa1.99□□□□□ -2.09
COL11A1-208ENST00000470170 ASH1LQ9NR48 2969 aaKnown RBP1.99□□□□□ -2.09
COL11A1-208ENST00000470170 SAMD9Q5K651 1589 aa1.99□□□□□ -2.09
COL11A1-208ENST00000470170 PTPRZ1P23471 2315 aaPredicted RBP1.99□□□□□ -2.09
COL11A1-208ENST00000470170 CLPSL1A2RUU4 121 aa1.99□□□□□ -2.09
COL11A1-208ENST00000470170 LEPROTL1O95214 131 aa1.99□□□□□ -2.09
COL11A1-208ENST00000470170 IGLV3-1P01715 115 aa1.99□□□□□ -2.09
COL11A1-208ENST00000470170 SMIM5Q71RC9 77 aa1.99□□□□□ -2.09
COL11A1-208ENST00000470170 ACACBO00763 2458 aa1.99□□□□□ -2.09
COL11A1-208ENST00000470170 ANKRD17O75179 2603 aaKnown RBP1.99□□□□□ -2.09
COL11A1-208ENST00000470170 IQGAP3Q86VI3 1631 aa1.99□□□□□ -2.09
COL11A1-208ENST00000470170 KNDC1Q76NI1 1749 aa1.98□□□□□ -2.09
COL11A1-208ENST00000470170 MYO5CQ9NQX4 1742 aa1.98□□□□□ -2.09
COL11A1-208ENST00000470170 TRGV4A0A0C4DH28 118 aa1.98□□□□□ -2.09
COL11A1-208ENST00000470170 D6R8Y8 96 aa1.98□□□□□ -2.09
COL11A1-208ENST00000470170 F8VRH5 84 aa1.98□□□□□ -2.09
COL11A1-208ENST00000470170 SFTA3P0C7M3 94 aa1.98□□□□□ -2.09
COL11A1-208ENST00000470170 ARMS2P0C7Q2 107 aa1.98□□□□□ -2.09
COL11A1-208ENST00000470170 MUSTN1Q8IVN3 82 aa1.98□□□□□ -2.09
COL11A1-208ENST00000470170 SPACA4Q8TDM5 124 aa1.98□□□□□ -2.09
COL11A1-208ENST00000470170 PSENENQ9NZ42 101 aa1.98□□□□□ -2.09
COL11A1-208ENST00000470170 V9GYV3 84 aa1.98□□□□□ -2.09
COL11A1-208ENST00000470170 GCN1Q92616 2671 aaKnown RBP1.98□□□□□ -2.09
COL11A1-208ENST00000470170 TEP1Q99973 2627 aaKnown RBP1.98□□□□□ -2.09
COL11A1-208ENST00000470170 SEC16AO15027 2179 aa1.98□□□□□ -2.09
COL11A1-208ENST00000470170 SPTBN5Q9NRC6 3674 aaKnown RBP1.97□□□□□ -2.09
COL11A1-208ENST00000470170 MYO18AQ92614 2054 aaKnown RBP1.97□□□□□ -2.09
COL11A1-208ENST00000470170 NCOR1O75376 2440 aa1.97□□□□□ -2.09
COL11A1-208ENST00000470170 COL4A6Q14031 1691 aa1.97□□□□□ -2.09
COL11A1-208ENST00000470170 DIDO1Q9BTC0 2240 aaKnown RBP1.97□□□□□ -2.09
COL11A1-208ENST00000470170 LAMA2P24043 3122 aaKnown RBP1.97□□□□□ -2.09
COL11A1-208ENST00000470170 DOCK2Q92608 1830 aa1.97□□□□□ -2.09
COL11A1-208ENST00000470170 A0A1W2PNN7 141 aa1.97□□□□□ -2.09
COL11A1-208ENST00000470170 FXYD1O00168 92 aa1.97□□□□□ -2.09
COL11A1-208ENST00000470170 TTTY12Q9BZ98 90 aa1.97□□□□□ -2.09
COL11A1-208ENST00000470170 ZNF292O60281 2723 aa1.97□□□□□ -2.09
COL11A1-208ENST00000470170 ZFHX4Q86UP3 3567 aa1.97□□□□□ -2.09
COL11A1-208ENST00000470170 LAMC1P11047 1609 aa1.96□□□□□ -2.1
COL11A1-208ENST00000470170 RGPD8O14715 1765 aaPredicted RBP1.96□□□□□ -2.1
COL11A1-208ENST00000470170 RGPD5Q99666 1765 aa1.96□□□□□ -2.1
COL11A1-208ENST00000470170 FAM223BA6NKX1 122 aa1.96□□□□□ -2.1
COL11A1-208ENST00000470170 COX8AP10176 69 aa1.96□□□□□ -2.1
COL11A1-208ENST00000470170 RNASE3P12724 160 aaKnown RBP1.96□□□□□ -2.1
COL11A1-208ENST00000470170 KRTAP21-3Q3LHN1 58 aa1.96□□□□□ -2.1
COL11A1-208ENST00000470170 LINC00322Q6ZN03 302 aaPredicted RBP1.96□□□□□ -2.1
COL11A1-208ENST00000470170 SNURFQ9Y675 71 aa1.96□□□□□ -2.1
COL11A1-208ENST00000470170 PKD1L3Q7Z443 1732 aa1.96□□□□□ -2.1
COL11A1-208ENST00000470170 UBR1Q8IWV7 1749 aa1.96□□□□□ -2.1
COL11A1-208ENST00000470170 COL4A5P29400 1685 aa1.96□□□□□ -2.1
COL11A1-208ENST00000470170 PLCH1Q4KWH8 1693 aa1.96□□□□□ -2.1
COL11A1-208ENST00000470170 MED12LQ86YW9 2145 aa1.96□□□□□ -2.1
COL11A1-208ENST00000470170 MICAL3Q7RTP6 2002 aa1.95□□□□□ -2.1
COL11A1-208ENST00000470170 ARHGEF5Q12774 1597 aa1.95□□□□□ -2.1
COL11A1-208ENST00000470170 SPTBN4Q9H254 2564 aa1.95□□□□□ -2.1
COL11A1-208ENST00000470170 IGKV2-40A0A087WW87 121 aaPredicted RBP1.95□□□□□ -2.1
COL11A1-208ENST00000470170 IGKV3D-7A0A0C4DH55 119 aa1.95□□□□□ -2.1
COL11A1-208ENST00000470170 IGKV3OR2-268A0A0C4DH90 116 aa1.95□□□□□ -2.1
COL11A1-208ENST00000470170 UQCR11O14957 56 aa1.95□□□□□ -2.1
COL11A1-208ENST00000470170 INE1O15225 51 aa1.95□□□□□ -2.1
COL11A1-208ENST00000470170 IGKV2D-40P01614 121 aaPredicted RBP1.95□□□□□ -2.1
COL11A1-208ENST00000470170 GCHFRP30047 84 aa1.95□□□□□ -2.1
COL11A1-208ENST00000470170 ATP5EP2Q5VTU8 51 aa1.95□□□□□ -2.1
COL11A1-208ENST00000470170 ZGRF1Q86YA3 2104 aa1.95□□□□□ -2.1
COL11A1-208ENST00000470170 LINC01558Q9Y6Z2 57 aa1.95□□□□□ -2.1
COL11A1-208ENST00000470170 LTBP2Q14767 1821 aa1.95□□□□□ -2.1
COL11A1-208ENST00000470170 TRPM2O94759 1503 aa1.95□□□□□ -2.1
COL11A1-208ENST00000470170 NRXN3Q9Y4C0 1643 aa1.95□□□□□ -2.1
COL11A1-208ENST00000470170 NRXN2Q9P2S2 1712 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 CNOT1A5YKK6 2376 aaKnown RBP1.94□□□□□ -2.1
COL11A1-208ENST00000470170 PLXNC1O60486 1568 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 KIAA0100Q14667 2235 aaKnown RBP1.94□□□□□ -2.1
COL11A1-208ENST00000470170 MYOFQ9NZM1 2061 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 MYO18BQ8IUG5 2567 aa1.94□□□□□ -2.1
COL11A1-208ENST00000470170 CACNA1DQ01668 2161 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms