RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 RNASE1P07998 156 aaKnown RBP9.62□□□□□ -0.87
BRCA1-209ENST00000470026 GAGE12FP0CL80 117 aa9.62□□□□□ -0.87
BRCA1-209ENST00000470026 GAGE12GP0CL81 117 aa9.62□□□□□ -0.87
BRCA1-209ENST00000470026 GAGE12IP0CL82 117 aa9.62□□□□□ -0.87
BRCA1-209ENST00000470026 MEIG1Q5JSS6 88 aa9.62□□□□□ -0.87
BRCA1-209ENST00000470026 LOC100131303A0A0U1RQF7 123 aa9.62□□□□□ -0.87
BRCA1-209ENST00000470026 WFDC10AQ9H1F0 79 aa9.62□□□□□ -0.87
BRCA1-209ENST00000470026 CENPEQ02224 2701 aa9.62□□□□□ -0.87
BRCA1-209ENST00000470026 ZFYVE26Q68DK2 2539 aa9.61□□□□□ -0.87
BRCA1-209ENST00000470026 TRGV2A0A075B6R0 118 aa9.61□□□□□ -0.87
BRCA1-209ENST00000470026 A0A0U1RRA0 63 aa9.61□□□□□ -0.87
BRCA1-209ENST00000470026 CHD6Q8TD26 2715 aa9.61□□□□□ -0.87
BRCA1-209ENST00000470026 TRAV26-1A0A087WT03 109 aa9.61□□□□□ -0.87
BRCA1-209ENST00000470026 TRACP01848 142 aa9.61□□□□□ -0.87
BRCA1-209ENST00000470026 GAGE2BQ13066 116 aa9.61□□□□□ -0.87
BRCA1-209ENST00000470026 GAGE2EQ4V326 116 aa9.61□□□□□ -0.87
BRCA1-209ENST00000470026 FAM222AQ5U5X8 452 aa9.61□□□□□ -0.87
BRCA1-209ENST00000470026 GAGE2DQ9UEU5 116 aa9.61□□□□□ -0.87
BRCA1-209ENST00000470026 PF4P02776 101 aa9.6□□□□□ -0.87
BRCA1-209ENST00000470026 FHL2Q14192 279 aa9.6□□□□□ -0.87
BRCA1-209ENST00000470026 C15orf53Q8NAA6 179 aa9.6□□□□□ -0.87
BRCA1-209ENST00000470026 WNK1Q9H4A3 2382 aa9.6□□□□□ -0.87
BRCA1-209ENST00000470026 NHLRC4P0CG21 123 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-209ENST00000470026 RPL35AP18077 110 aaKnown RBP9.59□□□□□ -0.87
BRCA1-209ENST00000470026 COX7B2Q8TF08 81 aa9.59□□□□□ -0.87
BRCA1-209ENST00000470026 ITPR3Q14573 2671 aa9.59□□□□□ -0.87
BRCA1-209ENST00000470026 TRBV6-8A0A0A6YYG3 113 aa9.59□□□□□ -0.87
BRCA1-209ENST00000470026 IGHV3OR16-9A0A0B4J2B5 98 aa9.59□□□□□ -0.87
BRCA1-209ENST00000470026 ANAPC13Q9BS18 74 aa9.59□□□□□ -0.87
BRCA1-209ENST00000470026 APCP25054 2843 aa9.59□□□□□ -0.87
BRCA1-209ENST00000470026 TRGV4A0A0C4DH28 118 aa9.58□□□□□ -0.88
BRCA1-209ENST00000470026 IGLV4-60A0A075B6I1 120 aa9.58□□□□□ -0.88
BRCA1-209ENST00000470026 RPL28P46779 137 aaKnown RBP9.58□□□□□ -0.88
BRCA1-209ENST00000470026 EPG5Q9HCE0 2579 aa9.58□□□□□ -0.88
BRCA1-209ENST00000470026 TRAV13-2A0A0B4J235 113 aa9.57□□□□□ -0.88
BRCA1-209ENST00000470026 GAGE6Q13070 117 aa9.57□□□□□ -0.88
BRCA1-209ENST00000470026 HIST2H2BCQ6DN03 193 aa9.57□□□□□ -0.88
BRCA1-209ENST00000470026 LINC00612Q8N6U2 182 aa9.57□□□□□ -0.88
BRCA1-209ENST00000470026 TLN2Q9Y4G6 2542 aa9.57□□□□□ -0.88
BRCA1-209ENST00000470026 NDUFV3P56181 108 aaKnown RBP9.56□□□□□ -0.88
BRCA1-209ENST00000470026 C22orf24Q9Y442 160 aa9.56□□□□□ -0.88
BRCA1-209ENST00000470026 A0A087WZ39 114 aa9.56□□□□□ -0.88
BRCA1-209ENST00000470026 ACYP1P07311 99 aa9.56□□□□□ -0.88
BRCA1-209ENST00000470026 PLA2G2AP14555 144 aa9.56□□□□□ -0.88
BRCA1-209ENST00000470026 SONP18583 2426 aaKnown RBP9.56□□□□□ -0.88
BRCA1-209ENST00000470026 IGKV2-28A0A075B6P5 120 aa9.55□□□□□ -0.88
BRCA1-209ENST00000470026 IGKV2D-28P01615 120 aa9.55□□□□□ -0.88
BRCA1-209ENST00000470026 MIR7-3HGQ8N6C7 128 aa9.55□□□□□ -0.88
BRCA1-209ENST00000470026 KIR2DL5BQ8NHK3 375 aa9.55□□□□□ -0.88
BRCA1-209ENST00000470026 FAM218AQ96MZ4 157 aa9.55□□□□□ -0.88
BRCA1-209ENST00000470026 TRBV7-7A0A0K0K1E9 115 aa9.54□□□□□ -0.88
BRCA1-209ENST00000470026 IBA57-AS1B1ANH7 110 aa9.54□□□□□ -0.88
BRCA1-209ENST00000470026 LINC00337Q8N6G1 96 aa9.54□□□□□ -0.88
BRCA1-209ENST00000470026 NOTCH3Q9UM47 2321 aa9.54□□□□□ -0.88
BRCA1-209ENST00000470026 CRPP02741 224 aa9.53□□□□□ -0.88
BRCA1-209ENST00000470026 SDIM1Q6ZPB5 146 aa9.53□□□□□ -0.88
BRCA1-209ENST00000470026 SND1-IT1Q9HBX3 110 aa9.53□□□□□ -0.88
BRCA1-209ENST00000470026 BAALC-AS2P0C853 105 aa9.52□□□□□ -0.89
BRCA1-209ENST00000470026 TTC32Q5I0X7 151 aa9.52□□□□□ -0.89
BRCA1-209ENST00000470026 CHCHD5Q9BSY4 110 aa9.52□□□□□ -0.89
BRCA1-209ENST00000470026 HILS1P60008 231 aa9.52□□□□□ -0.89
BRCA1-209ENST00000470026 SETXQ7Z333 2677 aaKnown RBP9.51□□□□□ -0.89
BRCA1-209ENST00000470026 LINC00959A0A1B0GUT2 108 aa9.51□□□□□ -0.89
BRCA1-209ENST00000470026 CCL18P55774 89 aa9.51□□□□□ -0.89
BRCA1-209ENST00000470026 TOMM7Q9P0U1 55 aa9.51□□□□□ -0.89
BRCA1-209ENST00000470026 ANK3Q12955 4377 aaKnown RBP9.5□□□□□ -0.89
BRCA1-209ENST00000470026 A0A1B0GUV1 79 aa9.5□□□□□ -0.89
BRCA1-209ENST00000470026 C2CD3Q4AC94 2353 aa9.5□□□□□ -0.89
BRCA1-209ENST00000470026 IGKV3OR2-268A0A0C4DH90 116 aa9.49□□□□□ -0.89
BRCA1-209ENST00000470026 LINC00158P58513 81 aa9.49□□□□□ -0.89
BRCA1-209ENST00000470026 IMUPQ9GZP8 106 aa9.49□□□□□ -0.89
BRCA1-209ENST00000470026 FLNAP21333 2647 aaKnown RBP9.49□□□□□ -0.89
BRCA1-209ENST00000470026 CUBNO60494 3623 aa9.49□□□□□ -0.89
BRCA1-209ENST00000470026 LINC01561Q8N1V8 128 aa9.49□□□□□ -0.89
BRCA1-209ENST00000470026 SMIM11BQ8TCY0 68 aa9.49□□□□□ -0.89
BRCA1-209ENST00000470026 NF1P21359 2839 aa9.48□□□□□ -0.89
BRCA1-209ENST00000470026 C5orf38Q86SI9 138 aa9.48□□□□□ -0.89
BRCA1-209ENST00000470026 H0YGX0 51 aa9.47□□□□□ -0.89
BRCA1-209ENST00000470026 X6R8D5 127 aa9.47□□□□□ -0.89
BRCA1-209ENST00000470026 JMJD1CQ15652 2540 aa9.47□□□□□ -0.89
BRCA1-209ENST00000470026 MALP21145 153 aa9.47□□□□□ -0.89
BRCA1-209ENST00000470026 SMCR5Q8TEV8 140 aa9.47□□□□□ -0.89
BRCA1-209ENST00000470026 SMIM9A6NGZ8 99 aa9.46□□□□□ -0.89
BRCA1-209ENST00000470026 LY6G6DO95868 133 aa9.46□□□□□ -0.89
BRCA1-209ENST00000470026 INAFM2P0DMQ5 153 aa9.46□□□□□ -0.89
BRCA1-209ENST00000470026 GYPEP15421 78 aa9.46□□□□□ -0.89
BRCA1-209ENST00000470026 KRTAP10-3P60369 221 aa9.46□□□□□ -0.89
BRCA1-209ENST00000470026 LINC00643Q86TS7 51 aa9.46□□□□□ -0.89
BRCA1-209ENST00000470026 LINC00482Q8N8I6 264 aa9.46□□□□□ -0.89
BRCA1-209ENST00000470026 NBPF19A0A087WUL8 3843 aa9.46□□□□□ -0.9
BRCA1-209ENST00000470026 DEFB130BP0DP73 79 aa9.46□□□□□ -0.9
BRCA1-209ENST00000470026 DEFB130AP0DP74 79 aa9.46□□□□□ -0.9
BRCA1-209ENST00000470026 Q8IZM0 81 aa9.46□□□□□ -0.9
BRCA1-209ENST00000470026 PDZD2O15018 2839 aa9.45□□□□□ -0.9
BRCA1-209ENST00000470026 Q9HAA7 133 aa9.45□□□□□ -0.9
BRCA1-209ENST00000470026 CCDC168Q8NDH2 2452 aa9.45□□□□□ -0.9
BRCA1-209ENST00000470026 A0A087WYN8 130 aa9.44□□□□□ -0.9
BRCA1-209ENST00000470026 OBSCN-AS1Q96MR7 158 aa9.44□□□□□ -0.9
BRCA1-209ENST00000470026 PRO0255Q9UI72 69 aa9.44□□□□□ -0.9
BRCA1-209ENST00000470026 SS18Q15532 418 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms