RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 C11orf45Q8TAV5 145 aa6.48□□□□□ -1.37
SMC1A-205ENST00000469129 NDUFA12Q9UI09 145 aa6.48□□□□□ -1.37
SMC1A-205ENST00000469129 COX11Q9Y6N1 276 aa6.48□□□□□ -1.37
SMC1A-205ENST00000469129 MEGF8Q7Z7M0 2845 aa6.48□□□□□ -1.37
SMC1A-205ENST00000469129 IGLV4-60A0A075B6I1 120 aa6.47□□□□□ -1.37
SMC1A-205ENST00000469129 TRAV8-3A0A0A6YYJ7 113 aa6.47□□□□□ -1.37
SMC1A-205ENST00000469129 IGLV5-39A0A0G2JS06 123 aa6.47□□□□□ -1.37
SMC1A-205ENST00000469129 SMIM1B2RUZ4 78 aa6.47□□□□□ -1.37
SMC1A-205ENST00000469129 RBX1P62877 108 aa6.47□□□□□ -1.37
SMC1A-205ENST00000469129 Q6ZTC4 211 aa6.47□□□□□ -1.37
SMC1A-205ENST00000469129 NOTCH1P46531 2555 aa6.47□□□□□ -1.37
SMC1A-205ENST00000469129 TAX1BP3O14907 124 aa6.46□□□□□ -1.38
SMC1A-205ENST00000469129 NDUFA1O15239 70 aa6.46□□□□□ -1.38
SMC1A-205ENST00000469129 SMIM13P0DJ93 91 aa6.46□□□□□ -1.38
SMC1A-205ENST00000469129 FXYD2P54710 66 aa6.46□□□□□ -1.38
SMC1A-205ENST00000469129 COX6A2Q02221 97 aa6.46□□□□□ -1.38
SMC1A-205ENST00000469129 DEFB121Q5J5C9 76 aa6.46□□□□□ -1.38
SMC1A-205ENST00000469129 SFTA2Q6UW10 78 aa6.46□□□□□ -1.38
SMC1A-205ENST00000469129 Q6ZVH6 145 aa6.46□□□□□ -1.38
SMC1A-205ENST00000469129 TRAV10A0A0B4J240 114 aa6.45□□□□□ -1.38
SMC1A-205ENST00000469129 IGKV3OR2-268A0A0C4DH90 116 aa6.45□□□□□ -1.38
SMC1A-205ENST00000469129 A0A0J9YXY3 114 aa6.45□□□□□ -1.38
SMC1A-205ENST00000469129 LINC00959A0A1B0GUT2 108 aa6.45□□□□□ -1.38
SMC1A-205ENST00000469129 TIMM17BO60830 172 aa6.45□□□□□ -1.38
SMC1A-205ENST00000469129 HERV-K104P63124 156 aa6.45□□□□□ -1.38
SMC1A-205ENST00000469129 LINC01561Q8N1V8 128 aa6.45□□□□□ -1.38
SMC1A-205ENST00000469129 NHP2Q9NX24 153 aaKnown RBP6.45□□□□□ -1.38
SMC1A-205ENST00000469129 DNAH3Q8TD57 4116 aa6.44□□□□□ -1.38
SMC1A-205ENST00000469129 PRKDCP78527 4128 aaKnown RBP6.44□□□□□ -1.38
SMC1A-205ENST00000469129 DEFB131BA0A096LNP1 70 aa6.44□□□□□ -1.38
SMC1A-205ENST00000469129 ANGP03950 147 aaKnown RBP6.44□□□□□ -1.38
SMC1A-205ENST00000469129 RPL24P83731 157 aaKnown RBP6.44□□□□□ -1.38
SMC1A-205ENST00000469129 CIRBPQ14011 172 aaKnown RBP6.44□□□□□ -1.38
SMC1A-205ENST00000469129 C10orf126Q8N4M7 172 aa6.44□□□□□ -1.38
SMC1A-205ENST00000469129 C15orf53Q8NAA6 179 aa6.44□□□□□ -1.38
SMC1A-205ENST00000469129 COPS9Q8WXC6 57 aa6.44□□□□□ -1.38
SMC1A-205ENST00000469129 SPANXDQ9BXN6 97 aa6.44□□□□□ -1.38
SMC1A-205ENST00000469129 SPANXCQ9NY87 97 aa6.44□□□□□ -1.38
SMC1A-205ENST00000469129 A0A087WZ39 114 aa6.43□□□□□ -1.38
SMC1A-205ENST00000469129 IGHV3OR16-9A0A0B4J2B5 98 aa6.43□□□□□ -1.38
SMC1A-205ENST00000469129 A0A1B0GWB2 263 aa6.43□□□□□ -1.38
SMC1A-205ENST00000469129 C9orf118A6NHY6 69 aa6.43□□□□□ -1.38
SMC1A-205ENST00000469129 IGHV3-30P01768 117 aa6.43□□□□□ -1.38
SMC1A-205ENST00000469129 PRB2P02812 416 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-205ENST00000469129 IGHV3-30-5P0DP03 117 aa6.43□□□□□ -1.38
SMC1A-205ENST00000469129 NANOS2P60321 138 aaKnown RBP6.43□□□□□ -1.38
SMC1A-205ENST00000469129 REG3AQ06141 175 aa6.43□□□□□ -1.38
SMC1A-205ENST00000469129 COX7B2Q8TF08 81 aa6.43□□□□□ -1.38
SMC1A-205ENST00000469129 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.42□□□□□ -1.38
SMC1A-205ENST00000469129 CRPP02741 224 aa6.42□□□□□ -1.38
SMC1A-205ENST00000469129 IFITM1P13164 125 aa6.42□□□□□ -1.38
SMC1A-205ENST00000469129 MIAQ16674 131 aa6.42□□□□□ -1.38
SMC1A-205ENST00000469129 LYPD5Q6UWN5 251 aa6.42□□□□□ -1.38
SMC1A-205ENST00000469129 Q9H8V8 135 aa6.42□□□□□ -1.38
SMC1A-205ENST00000469129 VAMP3Q15836 100 aa6.41□□□□□ -1.38
SMC1A-205ENST00000469129 CLPSL2Q6UWE3 100 aa6.41□□□□□ -1.38
SMC1A-205ENST00000469129 CD164L2Q6UWJ8 174 aa6.41□□□□□ -1.38
SMC1A-205ENST00000469129 LINC00269Q8N2A0 174 aa6.41□□□□□ -1.38
SMC1A-205ENST00000469129 MRAPQ8TCY5 172 aa6.41□□□□□ -1.38
SMC1A-205ENST00000469129 RAB37Q96AX2 223 aa6.41□□□□□ -1.38
SMC1A-205ENST00000469129 NBEAL2Q6ZNJ1 2754 aa6.41□□□□□ -1.38
SMC1A-205ENST00000469129 COX7A2LO14548 114 aa6.4□□□□□ -1.38
SMC1A-205ENST00000469129 PRSS2P07478 247 aa6.4□□□□□ -1.38
SMC1A-205ENST00000469129 CXCL5P42830 114 aa6.4□□□□□ -1.38
SMC1A-205ENST00000469129 XCL1P47992 114 aa6.4□□□□□ -1.38
SMC1A-205ENST00000469129 MEIG1Q5JSS6 88 aa6.4□□□□□ -1.38
SMC1A-205ENST00000469129 LYRM7Q5U5X0 104 aa6.4□□□□□ -1.38
SMC1A-205ENST00000469129 Q8IZM0 81 aa6.4□□□□□ -1.38
SMC1A-205ENST00000469129 CHCHD10Q8WYQ3 142 aaPredicted RBP6.4□□□□□ -1.38
SMC1A-205ENST00000469129 ZNF625Q96I27 306 aaPredicted RBP6.4□□□□□ -1.38
SMC1A-205ENST00000469129 LITAFQ99732 161 aa6.4□□□□□ -1.38
SMC1A-205ENST00000469129 B9D2Q9BPU9 175 aa6.4□□□□□ -1.38
SMC1A-205ENST00000469129 TRAV8-4A0A0B4J246 113 aa6.39□□□□□ -1.39
SMC1A-205ENST00000469129 A0A0B4J2C4 111 aa6.39□□□□□ -1.39
SMC1A-205ENST00000469129 H3BUT2 72 aa6.39□□□□□ -1.39
SMC1A-205ENST00000469129 K7EP13 123 aa6.39□□□□□ -1.39
SMC1A-205ENST00000469129 K7ERJ3 54 aa6.39□□□□□ -1.39
SMC1A-205ENST00000469129 APOMO95445 188 aa6.39□□□□□ -1.39
SMC1A-205ENST00000469129 FABP2P12104 132 aa6.39□□□□□ -1.39
SMC1A-205ENST00000469129 GTF2H5Q6ZYL4 71 aa6.39□□□□□ -1.39
SMC1A-205ENST00000469129 PPDPFQ9H3Y8 114 aa6.39□□□□□ -1.39
SMC1A-205ENST00000469129 PRR34Q9NV39 138 aa6.39□□□□□ -1.39
SMC1A-205ENST00000469129 TOMM7Q9P0U1 55 aa6.39□□□□□ -1.39
SMC1A-205ENST00000469129 A0A1W2PPM0 123 aa6.38□□□□□ -1.39
SMC1A-205ENST00000469129 MALP21145 153 aa6.38□□□□□ -1.39
SMC1A-205ENST00000469129 UBE2V1Q13404 147 aa6.38□□□□□ -1.39
SMC1A-205ENST00000469129 CFAP161Q6P656 301 aa6.38□□□□□ -1.39
SMC1A-205ENST00000469129 C5orf38Q86SI9 138 aa6.38□□□□□ -1.39
SMC1A-205ENST00000469129 MUSTN1Q8IVN3 82 aa6.38□□□□□ -1.39
SMC1A-205ENST00000469129 A4D1N5 150 aa6.37□□□□□ -1.39
SMC1A-205ENST00000469129 IGLL5B9A064 214 aa6.37□□□□□ -1.39
SMC1A-205ENST00000469129 IGHV3-33P01772 117 aa6.37□□□□□ -1.39
SMC1A-205ENST00000469129 LINC01556Q5JQF7 62 aa6.37□□□□□ -1.39
SMC1A-205ENST00000469129 WFDC10BQ8IUB3 73 aa6.37□□□□□ -1.39
SMC1A-205ENST00000469129 KLK12Q9UKR0 248 aa6.37□□□□□ -1.39
SMC1A-205ENST00000469129 IBA57-AS1B1ANH7 110 aa6.36□□□□□ -1.39
SMC1A-205ENST00000469129 K7EP34 96 aa6.36□□□□□ -1.39
SMC1A-205ENST00000469129 C6orf226Q5I0X4 101 aa6.36□□□□□ -1.39
SMC1A-205ENST00000469129 PGPEP1Q9NXJ5 209 aa6.36□□□□□ -1.39
SMC1A-205ENST00000469129 PRO1854Q9UHT4 67 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms