RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 TRAV9-2A0A087WT02 112 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 TRAV12-1A0A0B4J245 112 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 A0A0J9YXV3 536 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 NBDYA0A0U1RRE5 68 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 LY6G6CO95867 125 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 ANGP03950 147 aaKnown RBP3.98□□□□□ -1.77
USP39-213ENST00000467885 S100A2P29034 98 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 UBE2D1P51668 147 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 KRTAP10-2P60368 255 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 REG3AQ06141 175 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 LINC00242Q5T6M2 205 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 PET117Q6UWS5 81 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 MAPKAPK5-AS1Q8N8E1 139 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 OR10D4PQ8NGN7 298 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 LINC00476Q8WZB0 136 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 MAP1LC3CQ9BXW4 147 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 DNAH1Q9P2D7 4330 aa3.98□□□□□ -1.77
USP39-213ENST00000467885 STARD9Q9P2P6 4700 aa3.97□□□□□ -1.77
USP39-213ENST00000467885 IGLV4-69A0A075B6H9 119 aa3.97□□□□□ -1.77
USP39-213ENST00000467885 TRAV13-1A0A0B4J241 112 aa3.97□□□□□ -1.77
USP39-213ENST00000467885 IGHV3OR16-9A0A0B4J2B5 98 aa3.97□□□□□ -1.77
USP39-213ENST00000467885 CCL25O15444 150 aa3.97□□□□□ -1.77
USP39-213ENST00000467885 PAPPA-AS1Q5QFB9 102 aa3.97□□□□□ -1.77
USP39-213ENST00000467885 LINC01545Q5VT33 79 aa3.97□□□□□ -1.77
USP39-213ENST00000467885 Q6ZN92 141 aa3.97□□□□□ -1.77
USP39-213ENST00000467885 TEX43Q6ZNM6 134 aa3.97□□□□□ -1.77
USP39-213ENST00000467885 UBE2DNLQ8IWF7 75 aa3.97□□□□□ -1.77
USP39-213ENST00000467885 UBE2WQ96B02 151 aa3.97□□□□□ -1.77
USP39-213ENST00000467885 MRPL35Q9NZE8 188 aaKnown RBP3.97□□□□□ -1.77
USP39-213ENST00000467885 TRAV8-3A0A0A6YYJ7 113 aa3.96□□□□□ -1.78
USP39-213ENST00000467885 TRAV8-4A0A0B4J246 113 aa3.96□□□□□ -1.78
USP39-213ENST00000467885 M0R2N4 97 aa3.96□□□□□ -1.78
USP39-213ENST00000467885 KRTDAPP60985 99 aa3.96□□□□□ -1.78
USP39-213ENST00000467885 JOSD1Q15040 202 aaPredicted RBP3.96□□□□□ -1.78
USP39-213ENST00000467885 NFE4Q86UQ8 179 aa3.96□□□□□ -1.78
USP39-213ENST00000467885 PMCHL2Q9BQD1 86 aa3.96□□□□□ -1.78
USP39-213ENST00000467885 CHTOPQ9Y3Y2 248 aaKnown RBP3.96□□□□□ -1.78
USP39-213ENST00000467885 IGLV10-54A0A075B6I4 117 aa3.95□□□□□ -1.78
USP39-213ENST00000467885 IGLV5-45A0A087WSX0 123 aa3.95□□□□□ -1.78
USP39-213ENST00000467885 IGKV3OR2-268A0A0C4DH90 116 aa3.95□□□□□ -1.78
USP39-213ENST00000467885 LCE6AA0A183 80 aa3.95□□□□□ -1.78
USP39-213ENST00000467885 TINCRA0A1B0GVN0 87 aa3.95□□□□□ -1.78
USP39-213ENST00000467885 C11orf86A6NJI1 115 aa3.95□□□□□ -1.78
USP39-213ENST00000467885 IGLC3P0DOY3 106 aa3.95□□□□□ -1.78
USP39-213ENST00000467885 FOXI1Q12951 378 aa3.95□□□□□ -1.78
USP39-213ENST00000467885 SS18Q15532 418 aa3.95□□□□□ -1.78
USP39-213ENST00000467885 MIAQ16674 131 aa3.95□□□□□ -1.78
USP39-213ENST00000467885 CLPSL2Q6UWE3 100 aa3.95□□□□□ -1.78
USP39-213ENST00000467885 CD164L2Q6UWJ8 174 aa3.95□□□□□ -1.78
USP39-213ENST00000467885 Q6ZRN7 208 aaPredicted RBP3.95□□□□□ -1.78
USP39-213ENST00000467885 C10orf126Q8N4M7 172 aa3.95□□□□□ -1.78
USP39-213ENST00000467885 CHCHD10Q8WYQ3 142 aaPredicted RBP3.95□□□□□ -1.78
USP39-213ENST00000467885 CDKN2A-AS1Q9UH64 79 aa3.95□□□□□ -1.78
USP39-213ENST00000467885 GAGE12HA6NDE8 117 aa3.94□□□□□ -1.78
USP39-213ENST00000467885 F8VRH5 84 aa3.94□□□□□ -1.78
USP39-213ENST00000467885 H0Y8G0 127 aa3.94□□□□□ -1.78
USP39-213ENST00000467885 XCL1P47992 114 aa3.94□□□□□ -1.78
USP39-213ENST00000467885 PYY3Q5JQD4 70 aa3.94□□□□□ -1.78
USP39-213ENST00000467885 C5orf38Q86SI9 138 aa3.94□□□□□ -1.78
USP39-213ENST00000467885 KRTAP9-8Q9BYQ0 159 aa3.94□□□□□ -1.78
USP39-213ENST00000467885 IGKV2D-24A0A075B6R9 120 aa3.93□□□□□ -1.78
USP39-213ENST00000467885 A0A087WZ39 114 aa3.93□□□□□ -1.78
USP39-213ENST00000467885 TMEM223A0PJW6 202 aa3.93□□□□□ -1.78
USP39-213ENST00000467885 A4D1N5 150 aa3.93□□□□□ -1.78
USP39-213ENST00000467885 DPM2O94777 84 aa3.93□□□□□ -1.78
USP39-213ENST00000467885 IGKCP01834 107 aa3.93□□□□□ -1.78
USP39-213ENST00000467885 ZNF22P17026 224 aaPredicted RBP3.93□□□□□ -1.78
USP39-213ENST00000467885 HERVK_113P63121 156 aa3.93□□□□□ -1.78
USP39-213ENST00000467885 SEC11AP67812 179 aa3.93□□□□□ -1.78
USP39-213ENST00000467885 KIAA0087Q14695 138 aa3.93□□□□□ -1.78
USP39-213ENST00000467885 TTC32Q5I0X7 151 aa3.93□□□□□ -1.78
USP39-213ENST00000467885 LINC01561Q8N1V8 128 aa3.93□□□□□ -1.78
USP39-213ENST00000467885 STPG4Q8N801 248 aa3.93□□□□□ -1.78
USP39-213ENST00000467885 C2orf88Q9BSF0 95 aa3.93□□□□□ -1.78
USP39-213ENST00000467885 Q9HAA7 133 aa3.93□□□□□ -1.78
USP39-213ENST00000467885 IGLV5-39A0A0G2JS06 123 aa3.92□□□□□ -1.78
USP39-213ENST00000467885 LRCOL1A6NCL2 159 aa3.92□□□□□ -1.78
USP39-213ENST00000467885 SLPIP03973 132 aa3.92□□□□□ -1.78
USP39-213ENST00000467885 MAJINQ3KP22 176 aa3.92□□□□□ -1.78
USP39-213ENST00000467885 C1orf134Q5TEV5 83 aa3.92□□□□□ -1.78
USP39-213ENST00000467885 C6orf223Q8N319 242 aa3.92□□□□□ -1.78
USP39-213ENST00000467885 TM2D2Q9BX73 214 aa3.92□□□□□ -1.78
USP39-213ENST00000467885 GEMIN7Q9H840 131 aaKnown RBP3.92□□□□□ -1.78
USP39-213ENST00000467885 COX11Q9Y6N1 276 aa3.92□□□□□ -1.78
USP39-213ENST00000467885 IGHV3-64A0A075B6Q5 118 aa3.91□□□□□ -1.78
USP39-213ENST00000467885 hDV102S1A0JD36 115 aa3.91□□□□□ -1.78
USP39-213ENST00000467885 COX7A2LO14548 114 aa3.91□□□□□ -1.78
USP39-213ENST00000467885 RTL8CO15255 209 aa3.91□□□□□ -1.78
USP39-213ENST00000467885 CRPP02741 224 aa3.91□□□□□ -1.78
USP39-213ENST00000467885 PLNP26678 52 aa3.91□□□□□ -1.78
USP39-213ENST00000467885 AKR1D1P51857 326 aa3.91□□□□□ -1.78
USP39-213ENST00000467885 WFDC2Q14508 124 aa3.91□□□□□ -1.78
USP39-213ENST00000467885 TMEM170BQ5T4T1 132 aa3.91□□□□□ -1.78
USP39-213ENST00000467885 ATOH7Q8N100 152 aa3.91□□□□□ -1.78
USP39-213ENST00000467885 CHAC1Q9BUX1 264 aa3.91□□□□□ -1.78
USP39-213ENST00000467885 IGKV2D-26A0A0A0MRZ7 120 aa3.9□□□□□ -1.79
USP39-213ENST00000467885 SMIM1B2RUZ4 78 aa3.9□□□□□ -1.79
USP39-213ENST00000467885 SPINK8P0C7L1 97 aa3.9□□□□□ -1.79
USP39-213ENST00000467885 LINC00469Q8N7U9 141 aa3.9□□□□□ -1.79
USP39-213ENST00000467885 C15orf56Q8N910 161 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms