RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.98□□□□□ -0.655e-13■■■■■ 29.8
CHD1L-205ENST00000467213 CCL18P55774 89 aa10.98□□□□□ -0.65
CHD1L-205ENST00000467213 UPK3BQ9BT76 320 aa10.98□□□□□ -0.65
CHD1L-205ENST00000467213 A0A1W2PRX2 142 aa10.98□□□□□ -0.65
CHD1L-205ENST00000467213 GNLYP22749 145 aa10.98□□□□□ -0.65
CHD1L-205ENST00000467213 C3orf56Q8N813 242 aa10.98□□□□□ -0.65
CHD1L-205ENST00000467213 A0A087WZ39 114 aa10.97□□□□□ -0.65
CHD1L-205ENST00000467213 IGHV3OR16-9A0A0B4J2B5 98 aa10.97□□□□□ -0.65
CHD1L-205ENST00000467213 LINC01561Q8N1V8 128 aa10.97□□□□□ -0.65
CHD1L-205ENST00000467213 CMC4P56277 68 aaPredicted RBP10.96□□□□□ -0.65
CHD1L-205ENST00000467213 ODF3L2Q3SX64 289 aa10.96□□□□□ -0.65
CHD1L-205ENST00000467213 LINC00846Q9NV44 126 aa10.96□□□□□ -0.65
CHD1L-205ENST00000467213 C5orf47Q569G3 176 aa10.96□□□□□ -0.66
CHD1L-205ENST00000467213 CCKP06307 115 aa10.95□□□□□ -0.66
CHD1L-205ENST00000467213 STHQ8IWL8 128 aa10.95□□□□□ -0.66
CHD1L-205ENST00000467213 JMJD7-PLA2G4BH0Y9G9 81 aa10.95□□□□□ -0.66
CHD1L-205ENST00000467213 LYPD5Q6UWN5 251 aa10.95□□□□□ -0.66
CHD1L-205ENST00000467213 C14orf132Q9NPU4 83 aa10.95□□□□□ -0.66
CHD1L-205ENST00000467213 ORMDL1Q9P0S3 153 aa10.94□□□□□ -0.66
CHD1L-205ENST00000467213 XCL2Q9UBD3 114 aa10.94□□□□□ -0.66
CHD1L-205ENST00000467213 SORL1Q92673 2214 aa10.94□□□□□ -0.66
CHD1L-205ENST00000467213 TRBV10-3A0A0K0K1G6 114 aa10.94□□□□□ -0.66
CHD1L-205ENST00000467213 Q6ZTI0 123 aa10.94□□□□□ -0.66
CHD1L-205ENST00000467213 C11orf44Q8N8P7 122 aa10.94□□□□□ -0.66
CHD1L-205ENST00000467213 NDUFC2-KCTD14E9PQ53 114 aa10.94□□□□□ -0.66
CHD1L-205ENST00000467213 LINC00158P58513 81 aa10.94□□□□□ -0.66
CHD1L-205ENST00000467213 DEFB136Q30KP8 78 aa10.93□□□□□ -0.66
CHD1L-205ENST00000467213 C18orf65Q6ZTR6 163 aa10.93□□□□□ -0.66
CHD1L-205ENST00000467213 OR13C6PQ8NH95 151 aa10.93□□□□□ -0.66
CHD1L-205ENST00000467213 C16orf74Q96GX8 76 aa10.93□□□□□ -0.66
CHD1L-205ENST00000467213 MAP1AP78559 2803 aaPredicted RBP10.93□□□□□ -0.66
CHD1L-205ENST00000467213 BCE1O60756 84 aa10.92□□□□□ -0.66
CHD1L-205ENST00000467213 C9orf129Q5T035 196 aaKnown RBP10.92□□□□□ -0.66
CHD1L-205ENST00000467213 AKAP6Q13023 2319 aa10.92□□□□□ -0.66
CHD1L-205ENST00000467213 SPTBN4Q9H254 2564 aa10.92□□□□□ -0.66
CHD1L-205ENST00000467213 hADV29S1A0JD25 119 aa10.92□□□□□ -0.66
CHD1L-205ENST00000467213 LECT2O14960 151 aa10.92□□□□□ -0.66
CHD1L-205ENST00000467213 FAM19A5Q7Z5A7 132 aaPredicted RBP10.92□□□□□ -0.66
CHD1L-205ENST00000467213 USP17L23D6RBM5 183 aa10.91□□□□□ -0.66
CHD1L-205ENST00000467213 SS18Q15532 418 aa10.91□□□□□ -0.66
CHD1L-205ENST00000467213 VPS13CQ709C8 3753 aa10.91□□□□□ -0.66
CHD1L-205ENST00000467213 SMIM9A6NGZ8 99 aa10.9□□□□□ -0.66
CHD1L-205ENST00000467213 NDUFC2O95298 119 aa10.9□□□□□ -0.66
CHD1L-205ENST00000467213 DPH3Q96FX2 82 aa10.9□□□□□ -0.66
CHD1L-205ENST00000467213 TRBV6-8A0A0A6YYG3 113 aa10.89□□□□□ -0.67
CHD1L-205ENST00000467213 PLAC8L1A1L4L8 177 aa10.89□□□□□ -0.67
CHD1L-205ENST00000467213 CUBNO60494 3623 aa10.89□□□□□ -0.67
CHD1L-205ENST00000467213 IGF2RP11717 2491 aa10.89□□□□□ -0.67
CHD1L-205ENST00000467213 ATRXP46100 2492 aa10.89□□□□□ -0.67
CHD1L-205ENST00000467213 CHD8Q9HCK8 2581 aa10.89□□□□□ -0.67
CHD1L-205ENST00000467213 LOC107984640A0A0U1RRK4 108 aa10.88□□□□□ -0.67
CHD1L-205ENST00000467213 TMEM256-PLSCR3K7ERE1 68 aa10.88□□□□□ -0.67
CHD1L-205ENST00000467213 WIPF1O43516 503 aa10.88□□□□□ -0.67
CHD1L-205ENST00000467213 TMEM86BQ8N661 226 aa10.88□□□□□ -0.67
CHD1L-205ENST00000467213 Q8IZM0 81 aa10.88□□□□□ -0.67
CHD1L-205ENST00000467213 IGKV3D-7A0A0C4DH55 119 aa10.87□□□□□ -0.67
CHD1L-205ENST00000467213 TOMM7Q9P0U1 55 aa10.87□□□□□ -0.67
CHD1L-205ENST00000467213 PAX4O43316 350 aa10.86□□□□□ -0.67
CHD1L-205ENST00000467213 NOP10Q9NPE3 64 aaKnown RBP10.86□□□□□ -0.67
CHD1L-205ENST00000467213 NCR3O14931 201 aa10.86□□□□□ -0.67
CHD1L-205ENST00000467213 COX17Q14061 63 aa10.86□□□□□ -0.67
CHD1L-205ENST00000467213 NCOR2Q9Y618 2525 aa10.85□□□□□ -0.67
CHD1L-205ENST00000467213 IGLV4-60A0A075B6I1 120 aa10.85□□□□□ -0.67
CHD1L-205ENST00000467213 A0A1B0GUV1 79 aa10.85□□□□□ -0.67
CHD1L-205ENST00000467213 Q8N814 137 aa10.85□□□□□ -0.67
CHD1L-205ENST00000467213 LINC00959A0A1B0GUT2 108 aa10.84□□□□□ -0.67
CHD1L-205ENST00000467213 GIG44P09565 113 aaPredicted RBP10.84□□□□□ -0.67
CHD1L-205ENST00000467213 IGHV4-31P0DP07 118 aa10.84□□□□□ -0.67
CHD1L-205ENST00000467213 CYSTM1Q9H1C7 97 aa10.83□□□□□ -0.68
CHD1L-205ENST00000467213 MUC7Q8TAX7 377 aa10.83□□□□□ -0.68
CHD1L-205ENST00000467213 FHL2Q14192 279 aa10.82□□□□□ -0.68
CHD1L-205ENST00000467213 TRGV2A0A075B6R0 118 aa10.82□□□□□ -0.68
CHD1L-205ENST00000467213 H3BQ85 93 aa10.82□□□□□ -0.68
CHD1L-205ENST00000467213 NANOS2P60321 138 aaKnown RBP10.82□□□□□ -0.68
CHD1L-205ENST00000467213 C6orf226Q5I0X4 101 aa10.82□□□□□ -0.68
CHD1L-205ENST00000467213 TRGV4A0A0C4DH28 118 aa10.81□□□□□ -0.68
CHD1L-205ENST00000467213 A0A087WVE0 104 aa10.81□□□□□ -0.68
CHD1L-205ENST00000467213 PFN2P35080 140 aa10.81□□□□□ -0.68
CHD1L-205ENST00000467213 CSNK1G2-AS1Q8NCQ2 148 aa10.81□□□□□ -0.68
CHD1L-205ENST00000467213 CRYBG3Q68DQ2 2970 aa10.8□□□□□ -0.68
CHD1L-205ENST00000467213 IGHV4-28A0A0C4DH34 117 aa10.8□□□□□ -0.68
CHD1L-205ENST00000467213 LOC100131303A0A0U1RQF7 123 aa10.8□□□□□ -0.68
CHD1L-205ENST00000467213 CSPG4Q6UVK1 2322 aa10.79□□□□□ -0.68
CHD1L-205ENST00000467213 LOC110117498A0A087WWA1 95 aa10.79□□□□□ -0.68
CHD1L-205ENST00000467213 LINC00612Q8N6U2 182 aa10.78□□□□□ -0.68
CHD1L-205ENST00000467213 UBL5Q9BZL1 73 aa10.78□□□□□ -0.68
CHD1L-205ENST00000467213 CSMD2Q7Z408 3487 aa10.78□□□□□ -0.68
CHD1L-205ENST00000467213 SLPIP03973 132 aa10.78□□□□□ -0.68
CHD1L-205ENST00000467213 KIR2DL5BQ8NHK3 375 aa10.77□□□□□ -0.68
CHD1L-205ENST00000467213 KHDC1LQ5JSQ8 128 aa10.77□□□□□ -0.69
CHD1L-205ENST00000467213 CR1P17927 2039 aa10.77□□□□□ -0.69
CHD1L-205ENST00000467213 EPM2AB3EWF7 344 aa10.76□□□□□ -0.69
CHD1L-205ENST00000467213 CCL24O00175 119 aa10.76□□□□□ -0.69
CHD1L-205ENST00000467213 GHRHP01286 108 aa10.76□□□□□ -0.69
CHD1L-205ENST00000467213 C19orf73Q9NVV2 129 aa10.75□□□□□ -0.69
CHD1L-205ENST00000467213 PDE6GP18545 87 aa10.75□□□□□ -0.69
CHD1L-205ENST00000467213 KIAA0087Q14695 138 aa10.74□□□□□ -0.69
CHD1L-205ENST00000467213 C6orf223Q8N319 242 aa10.73□□□□□ -0.69
CHD1L-205ENST00000467213 TRAV7A0A075B6U4 112 aa10.73□□□□□ -0.69
CHD1L-205ENST00000467213 IGKV3OR2-268A0A0C4DH90 116 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms