RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 SMIM1B2RUZ4 78 aa14.27□□□□□ -0.12
CCDC78-207ENST00000466708 TRAV26-1A0A087WT03 109 aa14.27□□□□□ -0.13
CCDC78-207ENST00000466708 NDUFA1O15239 70 aa14.27□□□□□ -0.13
CCDC78-207ENST00000466708 RPL24P83731 157 aaKnown RBP14.26□□□□□ -0.13
CCDC78-207ENST00000466708 SPCS1Q9Y6A9 102 aa14.26□□□□□ -0.13
CCDC78-207ENST00000466708 F5H768 121 aa14.25□□□□□ -0.13
CCDC78-207ENST00000466708 TIMM17BO60830 172 aa14.25□□□□□ -0.13
CCDC78-207ENST00000466708 LITAFQ99732 161 aa14.25□□□□□ -0.13
CCDC78-207ENST00000466708 SPANXDQ9BXN6 97 aa14.25□□□□□ -0.13
CCDC78-207ENST00000466708 SPANXCQ9NY87 97 aa14.25□□□□□ -0.13
CCDC78-207ENST00000466708 SH2D6Q7Z4S9 175 aa14.23□□□□□ -0.13
CCDC78-207ENST00000466708 TMEM262E9PQX1 116 aa14.22□□□□□ -0.13
CCDC78-207ENST00000466708 MRPL23Q16540 153 aaKnown RBP14.22□□□□□ -0.13
CCDC78-207ENST00000466708 MUSTN1Q8IVN3 82 aa14.22□□□□□ -0.13
CCDC78-207ENST00000466708 A0A096LPF7 62 aa14.22□□□□□ -0.13
CCDC78-207ENST00000466708 APOMO95445 188 aa14.22□□□□□ -0.13
CCDC78-207ENST00000466708 CFC1BP0CG36 223 aa14.22□□□□□ -0.13
CCDC78-207ENST00000466708 CFC1P0CG37 223 aa14.22□□□□□ -0.13
CCDC78-207ENST00000466708 PGPEP1Q9NXJ5 209 aa14.22□□□□□ -0.13
CCDC78-207ENST00000466708 STAB1Q9NY15 2570 aa14.21□□□□□ -0.13
CCDC78-207ENST00000466708 RBX1P62877 108 aa14.21□□□□□ -0.13
CCDC78-207ENST00000466708 A4D1N5 150 aa14.2□□□□□ -0.14
CCDC78-207ENST00000466708 CIRBPQ14011 172 aaKnown RBP14.2□□□□□ -0.14
CCDC78-207ENST00000466708 MIAQ16674 131 aa14.2□□□□□ -0.14
CCDC78-207ENST00000466708 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.2□□□□□ -0.14
CCDC78-207ENST00000466708 Q9H8V8 135 aa14.2□□□□□ -0.14
CCDC78-207ENST00000466708 ICOSQ9Y6W8 199 aa14.2□□□□□ -0.14
CCDC78-207ENST00000466708 IGHV3OR16-9A0A0B4J2B5 98 aa14.19□□□□□ -0.14
CCDC78-207ENST00000466708 IGKV3OR2-268A0A0C4DH90 116 aa14.19□□□□□ -0.14
CCDC78-207ENST00000466708 LINC00959A0A1B0GUT2 108 aa14.19□□□□□ -0.14
CCDC78-207ENST00000466708 PRSS2P07478 247 aa14.18□□□□□ -0.14
CCDC78-207ENST00000466708 HTN3P15516 51 aa14.18□□□□□ -0.14
CCDC78-207ENST00000466708 HERV-K104P63124 156 aa14.18□□□□□ -0.14
CCDC78-207ENST00000466708 ADAMTSL4-AS1Q5T5F5 129 aa14.18□□□□□ -0.14
CCDC78-207ENST00000466708 PRO1854Q9UHT4 67 aa14.18□□□□□ -0.14
CCDC78-207ENST00000466708 A0A0B4J2C4 111 aa14.18□□□□□ -0.14
CCDC78-207ENST00000466708 G3V4G9 280 aa14.18□□□□□ -0.14
CCDC78-207ENST00000466708 IFITM1P13164 125 aa14.18□□□□□ -0.14
CCDC78-207ENST00000466708 ZNF625Q96I27 306 aaPredicted RBP14.17□□□□□ -0.14
CCDC78-207ENST00000466708 C11orf68Q9H3H3 251 aaKnown RBP14.17□□□□□ -0.14
CCDC78-207ENST00000466708 TSPAN13O95857 204 aa14.16□□□□□ -0.14
CCDC78-207ENST00000466708 SS18Q15532 418 aa14.16□□□□□ -0.14
CCDC78-207ENST00000466708 A0A087WZ39 114 aa14.15□□□□□ -0.14
CCDC78-207ENST00000466708 RETNQ9HD89 108 aa14.15□□□□□ -0.14
CCDC78-207ENST00000466708 MAST4O15021 2626 aa14.15□□□□□ -0.14
CCDC78-207ENST00000466708 LELP1Q5T871 98 aa14.14□□□□□ -0.15
CCDC78-207ENST00000466708 COX7B2Q8TF08 81 aa14.14□□□□□ -0.15
CCDC78-207ENST00000466708 LYRM7Q5U5X0 104 aa14.13□□□□□ -0.15
CCDC78-207ENST00000466708 H3BNG1 76 aa14.13□□□□□ -0.15
CCDC78-207ENST00000466708 COPS9Q8WXC6 57 aa14.13□□□□□ -0.15
CCDC78-207ENST00000466708 PKD1L1Q8TDX9 2849 aa14.12□□□□□ -0.15
CCDC78-207ENST00000466708 LINC01561Q8N1V8 128 aa14.11□□□□□ -0.15
CCDC78-207ENST00000466708 IGHV3-33P01772 117 aa14.1□□□□□ -0.15
CCDC78-207ENST00000466708 EIF4EBP3O60516 100 aaPredicted RBP14.09□□□□□ -0.15
CCDC78-207ENST00000466708 MEIG1Q5JSS6 88 aa14.09□□□□□ -0.15
CCDC78-207ENST00000466708 SFTA2Q6UW10 78 aa14.09□□□□□ -0.15
CCDC78-207ENST00000466708 C5orf38Q86SI9 138 aa14.09□□□□□ -0.15
CCDC78-207ENST00000466708 ERG28Q9UKR5 140 aa14.09□□□□□ -0.15
CCDC78-207ENST00000466708 CMYA5Q8N3K9 4069 aa14.09□□□□□ -0.15
CCDC78-207ENST00000466708 LOC107984156A0A0G2JMH3 177 aa14.08□□□□□ -0.15
CCDC78-207ENST00000466708 ARL17AQ8IVW1 177 aa14.08□□□□□ -0.15
CCDC78-207ENST00000466708 LINC00269Q8N2A0 174 aa14.08□□□□□ -0.15
CCDC78-207ENST00000466708 ANGP03950 147 aaKnown RBP14.08□□□□□ -0.16
CCDC78-207ENST00000466708 XCL1P47992 114 aa14.08□□□□□ -0.16
CCDC78-207ENST00000466708 PPDPFQ9H3Y8 114 aa14.08□□□□□ -0.16
CCDC78-207ENST00000466708 TOMM7Q9P0U1 55 aa14.08□□□□□ -0.16
CCDC78-207ENST00000466708 LINC00308Q8TCZ7 52 aa14.07□□□□□ -0.16
CCDC78-207ENST00000466708 COL6A5A8TX70 2615 aa14.07□□□□□ -0.16
CCDC78-207ENST00000466708 DAND5Q8N907 189 aa14.06□□□□□ -0.16
CCDC78-207ENST00000466708 NPC2P61916 151 aa14.06□□□□□ -0.16
CCDC78-207ENST00000466708 REG3AQ06141 175 aa14.06□□□□□ -0.16
CCDC78-207ENST00000466708 CLPSL2Q6UWE3 100 aa14.06□□□□□ -0.16
CCDC78-207ENST00000466708 CD164L2Q6UWJ8 174 aa14.06□□□□□ -0.16
CCDC78-207ENST00000466708 F8W1H4 67 aa14.05□□□□□ -0.16
CCDC78-207ENST00000466708 H3BMG7 143 aa14.05□□□□□ -0.16
CCDC78-207ENST00000466708 LYPD5Q6UWN5 251 aa14.05□□□□□ -0.16
CCDC78-207ENST00000466708 Q6ZTC4 211 aa14.05□□□□□ -0.16
CCDC78-207ENST00000466708 TRBV20-1A0A075B6N2 111 aa14.04□□□□□ -0.16
CCDC78-207ENST00000466708 A0A0J9YWU9 116 aa14.04□□□□□ -0.16
CCDC78-207ENST00000466708 KPRPQ5T749 579 aaPredicted RBP14.04□□□□□ -0.16
CCDC78-207ENST00000466708 A0A0U1RRA0 63 aa14.02□□□□□ -0.16
CCDC78-207ENST00000466708 Q8IZM0 81 aa14.02□□□□□ -0.16
CCDC78-207ENST00000466708 CHCHD10Q8WYQ3 142 aaPredicted RBP14.02□□□□□ -0.16
CCDC78-207ENST00000466708 DNAH3Q8TD57 4116 aa14.02□□□□□ -0.16
CCDC78-207ENST00000466708 SCGB1C2P0DMR2 95 aa14.01□□□□□ -0.17
CCDC78-207ENST00000466708 C6orf226Q5I0X4 101 aa14.01□□□□□ -0.17
CCDC78-207ENST00000466708 Q8N3U1 123 aa14.01□□□□□ -0.17
CCDC78-207ENST00000466708 COX7A2LO14548 114 aa14.01□□□□□ -0.17
CCDC78-207ENST00000466708 PSMB2P49721 201 aa14.01□□□□□ -0.17
CCDC78-207ENST00000466708 Q1RN00 199 aa14.01□□□□□ -0.17
CCDC78-207ENST00000466708 C11orf45Q8TAV5 145 aa14.01□□□□□ -0.17
CCDC78-207ENST00000466708 IBA57-AS1B1ANH7 110 aa14□□□□□ -0.17
CCDC78-207ENST00000466708 OCIAD2Q56VL3 154 aa14□□□□□ -0.17
CCDC78-207ENST00000466708 SPATA25Q9BR10 227 aa14□□□□□ -0.17
CCDC78-207ENST00000466708 TRBV30A0A0K0K1B3 111 aa13.99□□□□□ -0.17
CCDC78-207ENST00000466708 H7C2G1 150 aa13.99□□□□□ -0.17
CCDC78-207ENST00000466708 PRR34Q9NV39 138 aa13.99□□□□□ -0.17
CCDC78-207ENST00000466708 SOSTDC1Q6X4U4 206 aa13.98□□□□□ -0.17
CCDC78-207ENST00000466708 DEFB131BA0A096LNP1 70 aa13.97□□□□□ -0.17
CCDC78-207ENST00000466708 TCL1BO95988 128 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms